RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 C11orf95C9JLR9 678 aaPredicted RBP9.79□□□□□ -0.84
ATP2C1-220ENST00000513636 KDM4AO75164 1064 aa9.77□□□□□ -0.85
ATP2C1-220ENST00000513636 AVPP01185 164 aa9.77□□□□□ -0.85
ATP2C1-220ENST00000513636 CRIPAKQ8N1N5 446 aa9.77□□□□□ -0.85
ATP2C1-220ENST00000513636 CCDC24Q8N4L8 307 aa9.77□□□□□ -0.85
ATP2C1-220ENST00000513636 MAP2K5Q13163 448 aa9.76□□□□□ -0.85
ATP2C1-220ENST00000513636 LCE2AQ5TA79 106 aaPredicted RBP9.76□□□□□ -0.85
ATP2C1-220ENST00000513636 SNIP1Q8TAD8 396 aaKnown RBP9.76□□□□□ -0.85
ATP2C1-220ENST00000513636 USB1Q9BQ65 265 aaKnown RBP9.76□□□□□ -0.85
ATP2C1-220ENST00000513636 TRIM32Q13049 653 aa9.75□□□□□ -0.85
ATP2C1-220ENST00000513636 KRI1Q8N9T8 703 aaKnown RBP9.75□□□□□ -0.85
ATP2C1-220ENST00000513636 STK17AQ9UEE5 414 aa9.75□□□□□ -0.85
ATP2C1-220ENST00000513636 WNT7AO00755 349 aa9.74□□□□□ -0.85
ATP2C1-220ENST00000513636 WFS1O76024 890 aa9.74□□□□□ -0.85
ATP2C1-220ENST00000513636 CD46P15529 392 aa9.74□□□□□ -0.85
ATP2C1-220ENST00000513636 USP46P62068 366 aa9.74□□□□□ -0.85
ATP2C1-220ENST00000513636 GMPR2Q9P2T1 348 aaKnown RBP9.74□□□□□ -0.85
ATP2C1-220ENST00000513636 DACH1Q9UI36 760 aa9.74□□□□□ -0.85
ATP2C1-220ENST00000513636 MDM2Q00987 491 aaPredicted RBP9.73□□□□□ -0.85
ATP2C1-220ENST00000513636 REPIN1Q9BWE0 567 aaKnown RBP9.73□□□□□ -0.85
ATP2C1-220ENST00000513636 IRF6O14896 467 aa9.72□□□□□ -0.85
ATP2C1-220ENST00000513636 SMCPP49901 116 aaPredicted RBP9.72□□□□□ -0.85
ATP2C1-220ENST00000513636 MMP16P51512 607 aa9.72□□□□□ -0.85
ATP2C1-220ENST00000513636 MINK1Q8N4C8 1332 aaPredicted RBP9.71□□□□□ -0.86
ATP2C1-220ENST00000513636 MRGPRX2Q96LB1 330 aa9.7□□□□□ -0.86
ATP2C1-220ENST00000513636 INSM1Q01101 510 aaPredicted RBP9.69□□□□□ -0.86
ATP2C1-220ENST00000513636 NUTM1Q86Y26 1132 aa9.69□□□□□ -0.86
ATP2C1-220ENST00000513636 DXOO77932 396 aaKnown RBP9.68□□□□□ -0.86
ATP2C1-220ENST00000513636 SMPD1P17405 629 aa9.67□□□□□ -0.86
ATP2C1-220ENST00000513636 CLCN1P35523 988 aa9.67□□□□□ -0.86
ATP2C1-220ENST00000513636 SENP2Q9HC62 589 aa9.67□□□□□ -0.86
ATP2C1-220ENST00000513636 J3QL48 77 aa9.66□□□□□ -0.86
ATP2C1-220ENST00000513636 RC3H1Q5TC82 1133 aaKnown RBP9.66□□□□□ -0.86
ATP2C1-220ENST00000513636 GPCPD1Q9NPB8 672 aa9.66□□□□□ -0.86
ATP2C1-220ENST00000513636 HOXA2O43364 376 aa9.65□□□□□ -0.86
ATP2C1-220ENST00000513636 ATP13A2Q9NQ11 1180 aa9.65□□□□□ -0.86
ATP2C1-220ENST00000513636 KDM2AQ9Y2K7 1162 aa9.65□□□□□ -0.86
ATP2C1-220ENST00000513636 WNT7BP56706 349 aa9.64□□□□□ -0.87
ATP2C1-220ENST00000513636 HLA-CQ95604 372 aa9.64□□□□□ -0.87
ATP2C1-220ENST00000513636 CCDC102AQ96A19 550 aa9.63□□□□□ -0.87
ATP2C1-220ENST00000513636 ALDH1A1P00352 501 aa9.62□□□□□ -0.87
ATP2C1-220ENST00000513636 JUNDP17535 347 aa9.62□□□□□ -0.87
ATP2C1-220ENST00000513636 KIFC2Q96AC6 838 aa9.62□□□□□ -0.87
ATP2C1-220ENST00000513636 GUCA2AQ02747 115 aa9.61□□□□□ -0.87
ATP2C1-220ENST00000513636 HPS1Q92902 700 aa9.61□□□□□ -0.87
ATP2C1-220ENST00000513636 NUDT12Q9BQG2 462 aa9.61□□□□□ -0.87
ATP2C1-220ENST00000513636 C6orf229H3BNL8 230 aa9.6□□□□□ -0.87
ATP2C1-220ENST00000513636 WIPF1O43516 503 aa9.6□□□□□ -0.87
ATP2C1-220ENST00000513636 NFX1Q12986 1120 aaKnown RBP9.6□□□□□ -0.87
ATP2C1-220ENST00000513636 RETREG3Q86VR2 466 aa9.6□□□□□ -0.87
ATP2C1-220ENST00000513636 VSIG10Q8N0Z9 540 aa9.6□□□□□ -0.87
ATP2C1-220ENST00000513636 EHBP1Q8NDI1 1231 aa9.6□□□□□ -0.87
ATP2C1-220ENST00000513636 SYMPKQ92797 1274 aaKnown RBP9.6□□□□□ -0.87
ATP2C1-220ENST00000513636 FAM217BQ9NTX9 383 aaPredicted RBP9.6□□□□□ -0.87
ATP2C1-220ENST00000513636 WASF2Q9Y6W5 498 aa9.59□□□□□ -0.87
ATP2C1-220ENST00000513636 FDX1P10109 184 aa9.58□□□□□ -0.88
ATP2C1-220ENST00000513636 SNRPBP14678 240 aaKnown RBP9.58□□□□□ -0.88
ATP2C1-220ENST00000513636 SKOR1P84550 965 aa9.58□□□□□ -0.88
ATP2C1-220ENST00000513636 TRIM47Q96LD4 638 aa9.58□□□□□ -0.88
ATP2C1-220ENST00000513636 MS4A1P11836 297 aa9.56□□□□□ -0.88
ATP2C1-220ENST00000513636 TERTO14746 1132 aaKnown RBP9.55□□□□□ -0.88
ATP2C1-220ENST00000513636 SLC16A10Q8TF71 515 aa9.55□□□□□ -0.88
ATP2C1-220ENST00000513636 CCNYL3P0C7X3 344 aa9.53□□□□□ -0.88
ATP2C1-220ENST00000513636 SSTR3P32745 418 aaPredicted RBP9.53□□□□□ -0.88
ATP2C1-220ENST00000513636 TTLL12Q14166 644 aaPredicted RBP9.53□□□□□ -0.88
ATP2C1-220ENST00000513636 CAPN5O15484 640 aaPredicted RBP9.52□□□□□ -0.89
ATP2C1-220ENST00000513636 PTCRAQ6ISU1 281 aaPredicted RBP9.52□□□□□ -0.89
ATP2C1-220ENST00000513636 FAM181BA6NEQ2 426 aa9.51□□□□□ -0.89
ATP2C1-220ENST00000513636 LOC100996750A0A140TA64 210 aa9.5□□□□□ -0.89
ATP2C1-220ENST00000513636 KRTAP4-6Q9BYQ5 205 aa9.5□□□□□ -0.89
ATP2C1-220ENST00000513636 PLEKHG3A1L390 1219 aa9.49□□□□□ -0.89
ATP2C1-220ENST00000513636 PTPRNQ16849 979 aa9.49□□□□□ -0.89
ATP2C1-220ENST00000513636 PCDHGC3Q9UN70 934 aa9.49□□□□□ -0.89
ATP2C1-220ENST00000513636 SIAH2O43255 324 aa9.48□□□□□ -0.89
ATP2C1-220ENST00000513636 SH3BP2P78314 561 aa9.48□□□□□ -0.89
ATP2C1-220ENST00000513636 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.48□□□□□ -0.89
ATP2C1-220ENST00000513636 SPIRE2Q8WWL2 714 aa9.48□□□□□ -0.89
ATP2C1-220ENST00000513636 UNC93B1Q9H1C4 597 aa9.48□□□□□ -0.89
ATP2C1-220ENST00000513636 EVA1BQ9NVM1 165 aa9.48□□□□□ -0.89
ATP2C1-220ENST00000513636 SPDYE5A6NIY4 337 aa9.47□□□□□ -0.89
ATP2C1-220ENST00000513636 NDUFV2P19404 249 aa9.47□□□□□ -0.89
ATP2C1-220ENST00000513636 MTMR2Q13614 643 aa9.47□□□□□ -0.89
ATP2C1-220ENST00000513636 LINC01559Q495D7 138 aa9.47□□□□□ -0.89
ATP2C1-220ENST00000513636 PRR7Q8TB68 274 aa9.47□□□□□ -0.89
ATP2C1-220ENST00000513636 KCNH2Q12809 1159 aa9.46□□□□□ -0.9
ATP2C1-220ENST00000513636 BAP1Q92560 729 aa9.46□□□□□ -0.9
ATP2C1-220ENST00000513636 NXF1Q9UBU9 619 aaKnown RBP9.46□□□□□ -0.9
ATP2C1-220ENST00000513636 MOXD2PA6NHM9 499 aa9.45□□□□□ -0.9
ATP2C1-220ENST00000513636 BMP1P13497 986 aa9.45□□□□□ -0.9
ATP2C1-220ENST00000513636 CTHP32929 405 aa9.45□□□□□ -0.9
ATP2C1-220ENST00000513636 DIXDC1Q155Q3 683 aa9.45□□□□□ -0.9
ATP2C1-220ENST00000513636 VARSP26640 1264 aaKnown RBP9.44□□□□□ -0.9
ATP2C1-220ENST00000513636 LCE2CQ5TA81 110 aa9.44□□□□□ -0.9
ATP2C1-220ENST00000513636 SCARF1Q14162 830 aa9.43□□□□□ -0.9
ATP2C1-220ENST00000513636 DESI1Q6ICB0 168 aa9.42□□□□□ -0.9
ATP2C1-220ENST00000513636 ZNF511Q8NB15 262 aa9.42□□□□□ -0.9
ATP2C1-220ENST00000513636 IRF7Q92985 503 aa9.42□□□□□ -0.9
ATP2C1-220ENST00000513636 BEGAINQ9BUH8 593 aa9.42□□□□□ -0.9
ATP2C1-220ENST00000513636 GIGYF2Q6Y7W6 1299 aaKnown RBP9.41□□□□□ -0.9
ATP2C1-220ENST00000513636 BARGINQ6ZT62 677 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms