RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 NBPF1Q3BBV0 1214 aa10.66□□□□□ -0.7
DDR1-273ENST00000513514 PANK3Q9H999 370 aa10.66□□□□□ -0.7
DDR1-273ENST00000513514 RPGRIP1LQ68CZ1 1315 aa10.65□□□□□ -0.7
DDR1-273ENST00000513514 ASXL1Q8IXJ9 1541 aa10.65□□□□□ -0.7
DDR1-273ENST00000513514 SRCAPQ6ZRS2 3230 aa10.65□□□□□ -0.7
DDR1-273ENST00000513514 RGL3Q3MIN7 710 aa10.65□□□□□ -0.7
DDR1-273ENST00000513514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.65□□□□□ -0.7
DDR1-273ENST00000513514 SETBP1Q9Y6X0 1596 aa10.65□□□□□ -0.71
DDR1-273ENST00000513514 THEMISQ8N1K5 641 aaPredicted RBP10.64□□□□□ -0.71
DDR1-273ENST00000513514 IPO9Q96P70 1041 aaKnown RBP10.64□□□□□ -0.71
DDR1-273ENST00000513514 NINLQ9Y2I6 1382 aa10.64□□□□□ -0.71
DDR1-273ENST00000513514 NRXN1Q9ULB1 1477 aa10.63□□□□□ -0.71
DDR1-273ENST00000513514 WDR43Q15061 677 aaKnown RBP eCLIP10.63□□□□□ -0.71
DDR1-273ENST00000513514 NOP58Q9Y2X3 529 aaKnown RBP10.63□□□□□ -0.71
DDR1-273ENST00000513514 ABCC3O15438 1527 aa10.63□□□□□ -0.71
DDR1-273ENST00000513514 ERVK-7P63135 1459 aa10.62□□□□□ -0.71
DDR1-273ENST00000513514 MSH5O43196 834 aa10.62□□□□□ -0.71
DDR1-273ENST00000513514 AMER1Q5JTC6 1135 aaPredicted RBP10.62□□□□□ -0.71
DDR1-273ENST00000513514 USP35Q9P2H5 1018 aa10.62□□□□□ -0.71
DDR1-273ENST00000513514 ROBO1Q9Y6N7 1651 aa10.62□□□□□ -0.71
DDR1-273ENST00000513514 UBR1Q8IWV7 1749 aa10.61□□□□□ -0.71
DDR1-273ENST00000513514 KDM5AP29375 1690 aaKnown RBP10.61□□□□□ -0.71
DDR1-273ENST00000513514 EFCAB6Q5THR3 1501 aa10.6□□□□□ -0.71
DDR1-273ENST00000513514 CLTCL1P53675 1640 aa10.6□□□□□ -0.71
DDR1-273ENST00000513514 MROH1Q8NDA8 1641 aa10.6□□□□□ -0.71
DDR1-273ENST00000513514 RBM33Q96EV2 1170 aaKnown RBP10.6□□□□□ -0.71
DDR1-273ENST00000513514 DDRGK1Q96HY6 314 aa10.6□□□□□ -0.71
DDR1-273ENST00000513514 ZNF521Q96K83 1311 aa10.59□□□□□ -0.71
DDR1-273ENST00000513514 LTKP29376 864 aa10.59□□□□□ -0.71
DDR1-273ENST00000513514 PPP2R1AP30153 589 aa10.59□□□□□ -0.71
DDR1-273ENST00000513514 GOLGA2Q08379 1002 aa10.59□□□□□ -0.71
DDR1-273ENST00000513514 ZBTB47Q9UFB7 747 aaPredicted RBP10.59□□□□□ -0.71
DDR1-273ENST00000513514 FAM135BQ49AJ0 1406 aa10.58□□□□□ -0.72
DDR1-273ENST00000513514 KIF1BO60333 1816 aa10.58□□□□□ -0.72
DDR1-273ENST00000513514 ARHGAP23Q9P227 1491 aa10.58□□□□□ -0.72
DDR1-273ENST00000513514 POLR3AO14802 1390 aaPredicted RBP10.58□□□□□ -0.72
DDR1-273ENST00000513514 CENPQQ7L2Z9 268 aaPredicted RBP10.58□□□□□ -0.72
DDR1-273ENST00000513514 TRMT2AQ8IZ69 625 aaKnown RBP10.58□□□□□ -0.72
DDR1-273ENST00000513514 LRP6O75581 1613 aa10.58□□□□□ -0.72
DDR1-273ENST00000513514 NSD2O96028 1365 aa10.57□□□□□ -0.72
DDR1-273ENST00000513514 TMEM94Q12767 1356 aa10.57□□□□□ -0.72
DDR1-273ENST00000513514 E9PSI1 815 aa10.57□□□□□ -0.72
DDR1-273ENST00000513514 IFT172Q9UG01 1749 aa10.56□□□□□ -0.72
DDR1-273ENST00000513514 CC2D1BQ5T0F9 858 aaKnown RBP10.56□□□□□ -0.72
DDR1-273ENST00000513514 SLIT1O75093 1534 aa10.56□□□□□ -0.72
DDR1-273ENST00000513514 USP32Q8NFA0 1604 aa10.55□□□□□ -0.72
DDR1-273ENST00000513514 ADGRB3O60242 1522 aa10.55□□□□□ -0.72
DDR1-273ENST00000513514 BACH2Q9BYV9 841 aa10.55□□□□□ -0.72
DDR1-273ENST00000513514 ADAMTS8Q9UP79 889 aa10.55□□□□□ -0.72
DDR1-273ENST00000513514 PPM1GO15355 546 aaPredicted RBP10.54□□□□□ -0.72
DDR1-273ENST00000513514 ZFYVE9O95405 1425 aa10.54□□□□□ -0.72
DDR1-273ENST00000513514 SLFN5Q08AF3 891 aa10.54□□□□□ -0.72
DDR1-273ENST00000513514 PDE3AQ14432 1141 aa10.54□□□□□ -0.72
DDR1-273ENST00000513514 DUSP27Q5VZP5 1158 aa10.54□□□□□ -0.72
DDR1-273ENST00000513514 EXOC6Q8TAG9 804 aa10.54□□□□□ -0.72
DDR1-273ENST00000513514 UPF1Q92900 1129 aaKnown RBP eCLIP10.54□□□□□ -0.72
DDR1-273ENST00000513514 PIK3C2BO00750 1634 aa10.54□□□□□ -0.72
DDR1-273ENST00000513514 NKTRP30414 1462 aaKnown RBP10.54□□□□□ -0.72
DDR1-273ENST00000513514 PHLPP1O60346 1717 aa10.53□□□□□ -0.72
DDR1-273ENST00000513514 ARHGAP31Q2M1Z3 1444 aa10.53□□□□□ -0.72
DDR1-273ENST00000513514 TXNDC2Q86VQ3 553 aa10.53□□□□□ -0.72
DDR1-273ENST00000513514 MYOM1P52179 1685 aa10.53□□□□□ -0.72
DDR1-273ENST00000513514 COL16A1Q07092 1604 aaPredicted RBP10.52□□□□□ -0.73
DDR1-273ENST00000513514 CT47B1P0C2W7 299 aaPredicted RBP10.52□□□□□ -0.73
DDR1-273ENST00000513514 PDE4AP27815 886 aa10.52□□□□□ -0.73
DDR1-273ENST00000513514 CCDC27Q2M243 656 aa10.52□□□□□ -0.73
DDR1-273ENST00000513514 C14orf93Q9H972 538 aaKnown RBP10.52□□□□□ -0.73
DDR1-273ENST00000513514 CGNL1Q0VF96 1302 aa10.52□□□□□ -0.73
DDR1-273ENST00000513514 VGFO15240 615 aaPredicted RBP10.51□□□□□ -0.73
DDR1-273ENST00000513514 KDM2BQ8NHM5 1336 aa10.51□□□□□ -0.73
DDR1-273ENST00000513514 CENPJQ9HC77 1338 aaPredicted RBP10.51□□□□□ -0.73
DDR1-273ENST00000513514 NWD1Q149M9 1564 aa10.51□□□□□ -0.73
DDR1-273ENST00000513514 RTL5Q5HYW3 569 aaPredicted RBP10.5□□□□□ -0.73
DDR1-273ENST00000513514 WDR63Q8IWG1 891 aa10.5□□□□□ -0.73
DDR1-273ENST00000513514 CFAP65Q6ZU64 1925 aaKnown RBP10.5□□□□□ -0.73
DDR1-273ENST00000513514 JCADQ9P266 1359 aa10.5□□□□□ -0.73
DDR1-273ENST00000513514 TMEM2Q9UHN6 1383 aa10.5□□□□□ -0.73
DDR1-273ENST00000513514 CFAP53Q96M91 514 aa10.49□□□□□ -0.73
DDR1-273ENST00000513514 SLC26A8Q96RN1 970 aa10.49□□□□□ -0.73
DDR1-273ENST00000513514 SLC52A1Q9NWF4 448 aa10.49□□□□□ -0.73
DDR1-273ENST00000513514 PROSER2Q86WR7 435 aaPredicted RBP10.48□□□□□ -0.73
DDR1-273ENST00000513514 CDCA7LQ96GN5 454 aa10.48□□□□□ -0.73
DDR1-273ENST00000513514 NOS1P29475 1434 aa10.48□□□□□ -0.73
DDR1-273ENST00000513514 PNNQ9H307 717 aaKnown RBP10.47□□□□□ -0.73
DDR1-273ENST00000513514 MAPK8IP3Q9UPT6 1336 aa10.47□□□□□ -0.73
DDR1-273ENST00000513514 PLEKHH1Q9ULM0 1364 aa10.47□□□□□ -0.73
DDR1-273ENST00000513514 PPLO60437 1756 aa10.47□□□□□ -0.73
DDR1-273ENST00000513514 KCNA6P17658 529 aa10.46□□□□□ -0.73
DDR1-273ENST00000513514 CNGB1Q14028 1251 aaPredicted RBP10.46□□□□□ -0.73
DDR1-273ENST00000513514 FAM161AQ3B820 660 aa10.46□□□□□ -0.73
DDR1-273ENST00000513514 RUNDC1Q96C34 613 aa10.46□□□□□ -0.73
DDR1-273ENST00000513514 CRBNQ96SW2 442 aa10.46□□□□□ -0.73
DDR1-273ENST00000513514 EID1Q9Y6B2 187 aa10.46□□□□□ -0.73
DDR1-273ENST00000513514 EVC2Q86UK5 1308 aa10.46□□□□□ -0.73
DDR1-273ENST00000513514 ADGRB1O14514 1584 aa10.45□□□□□ -0.74
DDR1-273ENST00000513514 MSH6P52701 1360 aa10.45□□□□□ -0.74
DDR1-273ENST00000513514 ADGRF5Q8IZF2 1346 aa10.45□□□□□ -0.74
DDR1-273ENST00000513514 CFAP70Q5T0N1 1121 aa10.45□□□□□ -0.74
DDR1-273ENST00000513514 MEX3CQ5U5Q3 659 aaKnown RBP10.45□□□□□ -0.74
DDR1-273ENST00000513514 ANKRD36BQ8N2N9 1353 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms