RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 CARD11Q9BXL7 1154 aa22.09■■□□□ 1.13
POLR2J3-218ENST00000513506 POGKQ9P215 609 aa22.09■■□□□ 1.13
POLR2J3-218ENST00000513506 CDC42BPGQ6DT37 1551 aa22.08■■□□□ 1.13
POLR2J3-218ENST00000513506 UBAP1LF5GYI3 381 aa22.08■■□□□ 1.13
POLR2J3-218ENST00000513506 ATF3P18847 181 aa22.08■■□□□ 1.13
POLR2J3-218ENST00000513506 SBNO2Q9Y2G9 1366 aa22.08■■□□□ 1.12
POLR2J3-218ENST00000513506 NALCNQ8IZF0 1738 aa22.08■■□□□ 1.12
POLR2J3-218ENST00000513506 ADGRB2O60241 1585 aa22.08■■□□□ 1.12
POLR2J3-218ENST00000513506 C14orf37Q86TY3 774 aa22.07■■□□□ 1.12
POLR2J3-218ENST00000513506 SLAIN2Q9P270 581 aa22.07■■□□□ 1.12
POLR2J3-218ENST00000513506 CENPJQ9HC77 1338 aaPredicted RBP22.06■■□□□ 1.12
POLR2J3-218ENST00000513506 EIF3AQ14152 1382 aaKnown RBP22.06■■□□□ 1.12
POLR2J3-218ENST00000513506 MST1RQ04912 1400 aa22.06■■□□□ 1.12
POLR2J3-218ENST00000513506 C1orf167Q5SNV9 1468 aa22.01■■□□□ 1.11
POLR2J3-218ENST00000513506 WASLO00401 505 aaPredicted RBP22■■□□□ 1.11
POLR2J3-218ENST00000513506 SLC24A1O60721 1099 aa22■■□□□ 1.11
POLR2J3-218ENST00000513506 SAFB2Q14151 953 aaKnown RBP eCLIP21.99■■□□□ 1.11
POLR2J3-218ENST00000513506 ANKARQ7Z5J8 1434 aa21.98■■□□□ 1.11
POLR2J3-218ENST00000513506 MINK1Q8N4C8 1332 aaPredicted RBP21.98■■□□□ 1.11
POLR2J3-218ENST00000513506 TESK2Q96S53 571 aa21.97■■□□□ 1.11
POLR2J3-218ENST00000513506 USP47Q96K76 1375 aa21.97■■□□□ 1.11
POLR2J3-218ENST00000513506 PUS7Q96PZ0 661 aaKnown RBP21.96■■□□□ 1.11
POLR2J3-218ENST00000513506 FMN2Q9NZ56 1722 aa21.95■■□□□ 1.1
POLR2J3-218ENST00000513506 BRINP3Q76B58 766 aa21.95■■□□□ 1.1
POLR2J3-218ENST00000513506 ST20-MTHFSA0A0A6YYL1 179 aa21.94■■□□□ 1.1
POLR2J3-218ENST00000513506 HIRIP3Q9BW71 556 aaPredicted RBP21.94■■□□□ 1.1
POLR2J3-218ENST00000513506 CDK19Q9BWU1 502 aa21.93■■□□□ 1.1
POLR2J3-218ENST00000513506 TULP4Q9NRJ4 1543 aa21.93■■□□□ 1.1
POLR2J3-218ENST00000513506 QRICH2Q9H0J4 1663 aa21.91■■□□□ 1.1
POLR2J3-218ENST00000513506 EVC2Q86UK5 1308 aa21.91■■□□□ 1.1
POLR2J3-218ENST00000513506 PRR36Q9H6K5 1346 aa21.91■■□□□ 1.1
POLR2J3-218ENST00000513506 PIP4K2BP78356 416 aa21.91■■□□□ 1.1
POLR2J3-218ENST00000513506 ATP7BP35670 1465 aa21.9■■□□□ 1.1
POLR2J3-218ENST00000513506 ORAI2Q96SN7 254 aa21.89■■□□□ 1.09
POLR2J3-218ENST00000513506 ROBO1Q9Y6N7 1651 aa21.88■■□□□ 1.09
POLR2J3-218ENST00000513506 USP32Q8NFA0 1604 aa21.88■■□□□ 1.09
POLR2J3-218ENST00000513506 EIF4G2P78344 907 aaKnown RBP eCLIP21.88■■□□□ 1.09
POLR2J3-218ENST00000513506 AHDC1Q5TGY3 1603 aaPredicted RBP21.88■■□□□ 1.09
POLR2J3-218ENST00000513506 ILDR1Q86SU0 546 aaPredicted RBP21.87■■□□□ 1.09
POLR2J3-218ENST00000513506 NUDT16Q96DE0 195 aaKnown RBP21.87■■□□□ 1.09
POLR2J3-218ENST00000513506 CCDC61Q9Y6R9 512 aa21.87■■□□□ 1.09
POLR2J3-218ENST00000513506 PLEKHG3A1L390 1219 aa21.86■■□□□ 1.09
POLR2J3-218ENST00000513506 ZEB1P37275 1124 aaPredicted RBP21.86■■□□□ 1.09
POLR2J3-218ENST00000513506 ESCO1Q5FWF5 840 aa21.85■■□□□ 1.09
POLR2J3-218ENST00000513506 PHF8Q9UPP1 1060 aa21.84■■□□□ 1.09
POLR2J3-218ENST00000513506 SOS2Q07890 1332 aaPredicted RBP21.83■■□□□ 1.09
POLR2J3-218ENST00000513506 HSPA5P11021 654 aaKnown RBP21.82■■□□□ 1.08
POLR2J3-218ENST00000513506 HSPA1LP34931 641 aa21.82■■□□□ 1.08
POLR2J3-218ENST00000513506 CABP2Q9NPB3 220 aa21.82■■□□□ 1.08
POLR2J3-218ENST00000513506 POLR3AO14802 1390 aaPredicted RBP21.82■■□□□ 1.08
POLR2J3-218ENST00000513506 ATAD2Q6PL18 1390 aa21.82■■□□□ 1.08
POLR2J3-218ENST00000513506 NPHP3Q7Z494 1330 aa21.81■■□□□ 1.08
POLR2J3-218ENST00000513506 SCAF1Q9H7N4 1312 aaKnown RBP21.81■■□□□ 1.08
POLR2J3-218ENST00000513506 NHSL1Q5SYE7 1610 aa21.81■■□□□ 1.08
POLR2J3-218ENST00000513506 NUTM2FA1L443 756 aa21.81■■□□□ 1.08
POLR2J3-218ENST00000513506 SRPK2P78362 688 aaKnown RBP21.81■■□□□ 1.08
POLR2J3-218ENST00000513506 KIF1AQ12756 1690 aa21.81■■□□□ 1.08
POLR2J3-218ENST00000513506 TMF1P82094 1093 aa21.8■■□□□ 1.08
POLR2J3-218ENST00000513506 TOPAZ1Q8N9V7 1692 aa21.79■■□□□ 1.08
POLR2J3-218ENST00000513506 PXDNQ92626 1479 aa21.78■■□□□ 1.08
POLR2J3-218ENST00000513506 CDCA8Q53HL2 280 aa21.78■■□□□ 1.08
POLR2J3-218ENST00000513506 DISP3Q9P2K9 1392 aa21.77■■□□□ 1.08
POLR2J3-218ENST00000513506 FOXO3O43524 673 aa21.77■■□□□ 1.08
POLR2J3-218ENST00000513506 COL16A1Q07092 1604 aaPredicted RBP21.77■■□□□ 1.07
POLR2J3-218ENST00000513506 NINLQ9Y2I6 1382 aa21.76■■□□□ 1.07
POLR2J3-218ENST00000513506 BRD4O60885 1362 aaPredicted RBP21.75■■□□□ 1.07
POLR2J3-218ENST00000513506 ITSN1Q15811 1721 aa21.75■■□□□ 1.07
POLR2J3-218ENST00000513506 PPIP5K1Q6PFW1 1433 aa21.75■■□□□ 1.07
POLR2J3-218ENST00000513506 RGPD8O14715 1765 aaPredicted RBP21.74■■□□□ 1.07
POLR2J3-218ENST00000513506 LRRC59Q96AG4 307 aaKnown RBP21.74■■□□□ 1.07
POLR2J3-218ENST00000513506 CABP1Q9NZU7 370 aa21.74■■□□□ 1.07
POLR2J3-218ENST00000513506 SBNO1A3KN83 1393 aa21.74■■□□□ 1.07
POLR2J3-218ENST00000513506 PMFBP1Q8TBY8 1022 aa21.73■■□□□ 1.07
POLR2J3-218ENST00000513506 ACEP12821 1306 aa21.73■■□□□ 1.07
POLR2J3-218ENST00000513506 CPSF1Q10570 1443 aaKnown RBP21.72■■□□□ 1.07
POLR2J3-218ENST00000513506 KRT28Q7Z3Y7 464 aa21.72■■□□□ 1.07
POLR2J3-218ENST00000513506 DDX17Q92841 729 aaKnown RBP21.72■■□□□ 1.07
POLR2J3-218ENST00000513506 PSME1Q06323 249 aa21.71■■□□□ 1.07
POLR2J3-218ENST00000513506 ZNF692Q9BU19 519 aaPredicted RBP21.71■■□□□ 1.07
POLR2J3-218ENST00000513506 PHLPP1O60346 1717 aa21.71■■□□□ 1.07
POLR2J3-218ENST00000513506 NGDNQ8NEJ9 315 aaKnown RBP21.7■■□□□ 1.06
POLR2J3-218ENST00000513506 JCADQ9P266 1359 aa21.7■■□□□ 1.06
POLR2J3-218ENST00000513506 SSH2Q76I76 1423 aa21.7■■□□□ 1.06
POLR2J3-218ENST00000513506 SPATA31A3Q5VYP0 1347 aa21.69■■□□□ 1.06
POLR2J3-218ENST00000513506 CD163L1Q9NR16 1453 aa21.69■■□□□ 1.06
POLR2J3-218ENST00000513506 C11orf95C9JLR9 678 aaPredicted RBP21.66■■□□□ 1.06
POLR2J3-218ENST00000513506 SLC12A5Q9H2X9 1139 aa21.66■■□□□ 1.06
POLR2J3-218ENST00000513506 USP6P35125 1406 aa21.65■■□□□ 1.06
POLR2J3-218ENST00000513506 PNPLA6Q8IY17 1366 aa21.65■■□□□ 1.06
POLR2J3-218ENST00000513506 TNS3Q68CZ2 1445 aa21.64■■□□□ 1.06
POLR2J3-218ENST00000513506 TRPM3Q9HCF6 1732 aaPredicted RBP21.64■■□□□ 1.06
POLR2J3-218ENST00000513506 SPATA31A6Q5VVP1 1343 aa21.63■■□□□ 1.05
POLR2J3-218ENST00000513506 TERF2IPQ9NYB0 399 aa21.63■■□□□ 1.05
POLR2J3-218ENST00000513506 ARHGEF10O15013 1369 aa21.62■■□□□ 1.05
POLR2J3-218ENST00000513506 XPCQ01831 940 aaPredicted RBP21.62■■□□□ 1.05
POLR2J3-218ENST00000513506 SHPRHQ149N8 1683 aa21.62■■□□□ 1.05
POLR2J3-218ENST00000513506 ANKRD36BQ8N2N9 1353 aa21.61■■□□□ 1.05
POLR2J3-218ENST00000513506 COL22A1Q8NFW1 1626 aaPredicted RBP21.61■■□□□ 1.05
POLR2J3-218ENST00000513506 A0A1W2PP64 1363 aa21.6■■□□□ 1.05
POLR2J3-218ENST00000513506 KIF7Q2M1P5 1343 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms