RNA–Protein interactions for RNA: ENST00000513044.1

RBM47-210, Transcript of RNA binding motif protein 47, humanhuman

TSL 2

Gene RBM47, Length 2,118 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-210ENST00000513044 PTPRMP28827 1452 aa11.38□□□□□ -0.59
RBM47-210ENST00000513044 DDX10Q13206 875 aaKnown RBP11.38□□□□□ -0.59
RBM47-210ENST00000513044 NRXN3Q9Y4C0 1643 aa11.38□□□□□ -0.59
RBM47-210ENST00000513044 CEP170BQ9Y4F5 1589 aaPredicted RBP11.38□□□□□ -0.59
RBM47-210ENST00000513044 ZNF142P52746 1687 aaPredicted RBP11.37□□□□□ -0.59
RBM47-210ENST00000513044 SETD1AO15047 1707 aaKnown RBP11.37□□□□□ -0.59
RBM47-210ENST00000513044 NUTM2DQ5VT03 806 aaPredicted RBP11.37□□□□□ -0.59
RBM47-210ENST00000513044 THEMISQ8N1K5 641 aaPredicted RBP11.37□□□□□ -0.59
RBM47-210ENST00000513044 PLEKHG1Q9ULL1 1385 aa11.37□□□□□ -0.59
RBM47-210ENST00000513044 MED14O60244 1454 aa11.36□□□□□ -0.59
RBM47-210ENST00000513044 PODXL2Q9NZ53 605 aa11.35□□□□□ -0.59
RBM47-210ENST00000513044 ADAMTS13Q76LX8 1427 aa11.34□□□□□ -0.59
RBM47-210ENST00000513044 DLC1Q96QB1 1528 aa11.34□□□□□ -0.59
RBM47-210ENST00000513044 LTKP29376 864 aa11.34□□□□□ -0.59
RBM47-210ENST00000513044 TMF1P82094 1093 aa11.34□□□□□ -0.59
RBM47-210ENST00000513044 TMEM132EQ6IEE7 984 aa11.34□□□□□ -0.59
RBM47-210ENST00000513044 DISP3Q9P2K9 1392 aa11.34□□□□□ -0.59
RBM47-210ENST00000513044 YTHDC2Q9H6S0 1430 aaKnown RBP11.34□□□□□ -0.59
RBM47-210ENST00000513044 SETD1BQ9UPS6 1966 aaKnown RBP11.34□□□□□ -0.59
RBM47-210ENST00000513044 ABCC11Q96J66 1382 aa11.33□□□□□ -0.6
RBM47-210ENST00000513044 RGL2O15211 777 aa11.33□□□□□ -0.6
RBM47-210ENST00000513044 SPRYD3Q8NCJ5 442 aa11.33□□□□□ -0.6
RBM47-210ENST00000513044 SPOCK2Q92563 424 aa11.33□□□□□ -0.6
RBM47-210ENST00000513044 CENPJQ9HC77 1338 aaPredicted RBP11.33□□□□□ -0.6
RBM47-210ENST00000513044 LRPPRCP42704 1394 aaKnown RBP11.33□□□□□ -0.6
RBM47-210ENST00000513044 TECPR2O15040 1411 aa11.33□□□□□ -0.6
RBM47-210ENST00000513044 ARHGEF28Q8N1W1 1705 aaKnown RBP11.33□□□□□ -0.6
RBM47-210ENST00000513044 TXNDC2Q86VQ3 553 aa11.32□□□□□ -0.6
RBM47-210ENST00000513044 MIER1Q8N108 512 aa11.32□□□□□ -0.6
RBM47-210ENST00000513044 SIRT1Q96EB6 747 aa11.32□□□□□ -0.6
RBM47-210ENST00000513044 PUS7Q96PZ0 661 aaKnown RBP11.32□□□□□ -0.6
RBM47-210ENST00000513044 EID1Q9Y6B2 187 aa11.32□□□□□ -0.6
RBM47-210ENST00000513044 CDCA8Q53HL2 280 aa11.32□□□□□ -0.6
RBM47-210ENST00000513044 TRAK1Q9UPV9 953 aa11.31□□□□□ -0.6
RBM47-210ENST00000513044 METP08581 1390 aa11.31□□□□□ -0.6
RBM47-210ENST00000513044 TBX22Q9Y458 520 aa11.3□□□□□ -0.6
RBM47-210ENST00000513044 DIP2AQ14689 1571 aa11.3□□□□□ -0.6
RBM47-210ENST00000513044 KNDC1Q76NI1 1749 aa11.29□□□□□ -0.6
RBM47-210ENST00000513044 FAM135BQ49AJ0 1406 aa11.29□□□□□ -0.6
RBM47-210ENST00000513044 QRICH2Q9H0J4 1663 aa11.29□□□□□ -0.6
RBM47-210ENST00000513044 CPS1P31327 1500 aa11.28□□□□□ -0.6
RBM47-210ENST00000513044 KDM4FA0A1W2PPD8 638 aa11.27□□□□□ -0.6
RBM47-210ENST00000513044 PIK3R4Q99570 1358 aa11.27□□□□□ -0.6
RBM47-210ENST00000513044 ANKLE2Q86XL3 938 aa11.26□□□□□ -0.61
RBM47-210ENST00000513044 GTF3C3Q9Y5Q9 886 aa11.26□□□□□ -0.61
RBM47-210ENST00000513044 TULP4Q9NRJ4 1543 aa11.26□□□□□ -0.61
RBM47-210ENST00000513044 PER1O15534 1290 aaPredicted RBP11.26□□□□□ -0.61
RBM47-210ENST00000513044 ANP32CO43423 234 aa11.25□□□□□ -0.61
RBM47-210ENST00000513044 PRAM1Q96QH2 718 aa11.25□□□□□ -0.61
RBM47-210ENST00000513044 STK26Q9P289 416 aa11.24□□□□□ -0.61
RBM47-210ENST00000513044 PTPRUQ92729 1446 aa11.24□□□□□ -0.61
RBM47-210ENST00000513044 MYOM1P52179 1685 aa11.24□□□□□ -0.61
RBM47-210ENST00000513044 CCER2I3L3R5 266 aa11.24□□□□□ -0.61
RBM47-210ENST00000513044 EVC2Q86UK5 1308 aa11.24□□□□□ -0.61
RBM47-210ENST00000513044 NBR1Q14596 966 aa11.23□□□□□ -0.61
RBM47-210ENST00000513044 PTCH1Q13635 1447 aa11.23□□□□□ -0.61
RBM47-210ENST00000513044 KTN1Q86UP2 1357 aaKnown RBP11.23□□□□□ -0.61
RBM47-210ENST00000513044 PRKRIP1Q9H875 184 aaPredicted RBP11.23□□□□□ -0.61
RBM47-210ENST00000513044 XRN1Q8IZH2 1706 aaKnown RBP11.22□□□□□ -0.61
RBM47-210ENST00000513044 SLC26A8Q96RN1 970 aa11.22□□□□□ -0.61
RBM47-210ENST00000513044 ROBO2Q9HCK4 1378 aa11.22□□□□□ -0.61
RBM47-210ENST00000513044 PLEKHH1Q9ULM0 1364 aa11.22□□□□□ -0.61
RBM47-210ENST00000513044 NINLQ9Y2I6 1382 aa11.22□□□□□ -0.61
RBM47-210ENST00000513044 POLR3GLQ9BT43 218 aa11.21□□□□□ -0.61
RBM47-210ENST00000513044 POGKQ9P215 609 aa11.21□□□□□ -0.61
RBM47-210ENST00000513044 NPHP4O75161 1426 aaPredicted RBP11.21□□□□□ -0.62
RBM47-210ENST00000513044 PANK3Q9H999 370 aa11.21□□□□□ -0.62
RBM47-210ENST00000513044 ADGRB2O60241 1585 aa11.21□□□□□ -0.62
RBM47-210ENST00000513044 NPC1L1Q9UHC9 1359 aa11.21□□□□□ -0.62
RBM47-210ENST00000513044 PLEKHG5O94827 1062 aa11.2□□□□□ -0.62
RBM47-210ENST00000513044 WAPLQ7Z5K2 1190 aa11.2□□□□□ -0.62
RBM47-210ENST00000513044 ATAD2Q6PL18 1390 aa11.19□□□□□ -0.62
RBM47-210ENST00000513044 AMOTL2Q9Y2J4 779 aa11.19□□□□□ -0.62
RBM47-210ENST00000513044 LMTK3Q96Q04 1460 aa11.18□□□□□ -0.62
RBM47-210ENST00000513044 PARD3Q8TEW0 1356 aa11.18□□□□□ -0.62
RBM47-210ENST00000513044 RALBP1Q15311 655 aa11.17□□□□□ -0.62
RBM47-210ENST00000513044 MINK1Q8N4C8 1332 aaPredicted RBP11.17□□□□□ -0.62
RBM47-210ENST00000513044 CHD2O14647 1828 aaKnown RBP11.17□□□□□ -0.62
RBM47-210ENST00000513044 WASLO00401 505 aaPredicted RBP11.17□□□□□ -0.62
RBM47-210ENST00000513044 SAFB2Q14151 953 aaKnown RBP eCLIP11.17□□□□□ -0.62
RBM47-210ENST00000513044 CDK19Q9BWU1 502 aa11.17□□□□□ -0.62
RBM47-210ENST00000513044 NWD1Q149M9 1564 aa11.16□□□□□ -0.62
RBM47-210ENST00000513044 ANKRD36BQ8N2N9 1353 aa11.16□□□□□ -0.62
RBM47-210ENST00000513044 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.16□□□□□ -0.62
RBM47-210ENST00000513044 NCKAP5LQ9HCH0 1330 aa11.15□□□□□ -0.62
RBM47-210ENST00000513044 CARD14Q9BXL6 1004 aa11.15□□□□□ -0.62
RBM47-210ENST00000513044 SLC12A5Q9H2X9 1139 aa11.15□□□□□ -0.62
RBM47-210ENST00000513044 CABP2Q9NPB3 220 aa11.15□□□□□ -0.62
RBM47-210ENST00000513044 USP32Q8NFA0 1604 aa11.15□□□□□ -0.62
RBM47-210ENST00000513044 KCNA6P17658 529 aa11.14□□□□□ -0.63
RBM47-210ENST00000513044 SRPK2P78362 688 aaKnown RBP11.14□□□□□ -0.63
RBM47-210ENST00000513044 CD163L1Q9NR16 1453 aa11.14□□□□□ -0.63
RBM47-210ENST00000513044 KNSTRNQ9Y448 316 aa11.14□□□□□ -0.63
RBM47-210ENST00000513044 ATP7BP35670 1465 aa11.13□□□□□ -0.63
RBM47-210ENST00000513044 MYBBP1AQ9BQG0 1328 aaKnown RBP11.11□□□□□ -0.63
RBM47-210ENST00000513044 CPSF1Q10570 1443 aaKnown RBP11.11□□□□□ -0.63
RBM47-210ENST00000513044 CCDC61Q9Y6R9 512 aa11.11□□□□□ -0.63
RBM47-210ENST00000513044 NKTRP30414 1462 aaKnown RBP11.11□□□□□ -0.63
RBM47-210ENST00000513044 NPM2Q86SE8 214 aaKnown RBP11.11□□□□□ -0.63
RBM47-210ENST00000513044 TMC1Q8TDI8 760 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms