RNA–Protein interactions for RNA: ENST00000513026.5

LINC00461-213, long intergenic non-protein coding RNA 461, humanhuman

TSL 4

Gene LINC00461, Length 533 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-213ENST00000513026 SYCP2Q9BX26 1530 aa13.34□□□□□ -0.27
LINC00461-213ENST00000513026 SHROOM2Q13796 1616 aa13.33□□□□□ -0.28
LINC00461-213ENST00000513026 WDR43Q15061 677 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC00461-213ENST00000513026 DUSP27Q5VZP5 1158 aa13.33□□□□□ -0.28
LINC00461-213ENST00000513026 CRBNQ96SW2 442 aa13.33□□□□□ -0.28
LINC00461-213ENST00000513026 SBNO2Q9Y2G9 1366 aa13.32□□□□□ -0.28
LINC00461-213ENST00000513026 HNRNPMP52272 730 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC00461-213ENST00000513026 PDE3AQ14432 1141 aa13.32□□□□□ -0.28
LINC00461-213ENST00000513026 AKT1S1Q96B36 256 aa13.32□□□□□ -0.28
LINC00461-213ENST00000513026 CEP152O94986 1710 aa13.32□□□□□ -0.28
LINC00461-213ENST00000513026 ARHGAP5Q13017 1502 aa13.32□□□□□ -0.28
LINC00461-213ENST00000513026 CGNL1Q0VF96 1302 aa13.32□□□□□ -0.28
LINC00461-213ENST00000513026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.31□□□□□ -0.28
LINC00461-213ENST00000513026 E9PSI1 815 aa13.31□□□□□ -0.28
LINC00461-213ENST00000513026 SLFN5Q08AF3 891 aa13.31□□□□□ -0.28
LINC00461-213ENST00000513026 VIRMAQ69YN4 1812 aaKnown RBP13.31□□□□□ -0.28
LINC00461-213ENST00000513026 MAPK8IP3Q9UPT6 1336 aa13.31□□□□□ -0.28
LINC00461-213ENST00000513026 UHRF1BP1LA0JNW5 1464 aa13.3□□□□□ -0.28
LINC00461-213ENST00000513026 NKTRP30414 1462 aaKnown RBP13.3□□□□□ -0.28
LINC00461-213ENST00000513026 PPP2R1AP30153 589 aa13.3□□□□□ -0.28
LINC00461-213ENST00000513026 WDR70Q9NW82 654 aa13.3□□□□□ -0.28
LINC00461-213ENST00000513026 PLCH2O75038 1416 aa13.3□□□□□ -0.28
LINC00461-213ENST00000513026 MYOM2P54296 1465 aa13.29□□□□□ -0.28
LINC00461-213ENST00000513026 DEPDC5O75140 1603 aa13.29□□□□□ -0.28
LINC00461-213ENST00000513026 NBPF1Q3BBV0 1214 aa13.29□□□□□ -0.28
LINC00461-213ENST00000513026 KDM5AP29375 1690 aaKnown RBP13.28□□□□□ -0.28
LINC00461-213ENST00000513026 CDCA7LQ96GN5 454 aa13.28□□□□□ -0.28
LINC00461-213ENST00000513026 TET3O43151 1660 aa13.28□□□□□ -0.28
LINC00461-213ENST00000513026 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
LINC00461-213ENST00000513026 ADAMTS8Q9UP79 889 aa13.27□□□□□ -0.29
LINC00461-213ENST00000513026 ABCC1P33527 1531 aa13.27□□□□□ -0.29
LINC00461-213ENST00000513026 POLR3AO14802 1390 aaPredicted RBP13.26□□□□□ -0.29
LINC00461-213ENST00000513026 NPM2Q86SE8 214 aaKnown RBP13.26□□□□□ -0.29
LINC00461-213ENST00000513026 VWDEQ8N2E2 1590 aa13.26□□□□□ -0.29
LINC00461-213ENST00000513026 PUS7Q96PZ0 661 aaKnown RBP13.26□□□□□ -0.29
LINC00461-213ENST00000513026 MYO3AQ8NEV4 1616 aa13.25□□□□□ -0.29
LINC00461-213ENST00000513026 PLEKHH1Q9ULM0 1364 aa13.25□□□□□ -0.29
LINC00461-213ENST00000513026 CACNB1Q02641 598 aaPredicted RBP13.25□□□□□ -0.29
LINC00461-213ENST00000513026 BECN1Q14457 450 aa13.25□□□□□ -0.29
LINC00461-213ENST00000513026 NFKBIBQ15653 356 aa13.25□□□□□ -0.29
LINC00461-213ENST00000513026 C8orf34Q49A92 452 aa13.25□□□□□ -0.29
LINC00461-213ENST00000513026 EFCAB2Q5VUJ9 269 aa13.25□□□□□ -0.29
LINC00461-213ENST00000513026 KANK1Q14678 1352 aa13.24□□□□□ -0.29
LINC00461-213ENST00000513026 CC2D1BQ5T0F9 858 aaKnown RBP13.24□□□□□ -0.29
LINC00461-213ENST00000513026 LMOD2Q6P5Q4 547 aa13.24□□□□□ -0.29
LINC00461-213ENST00000513026 KCNV2Q8TDN2 545 aa13.24□□□□□ -0.29
LINC00461-213ENST00000513026 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC00461-213ENST00000513026 MYOM1P52179 1685 aa13.23□□□□□ -0.29
LINC00461-213ENST00000513026 CADPS2Q86UW7 1296 aa13.22□□□□□ -0.29
LINC00461-213ENST00000513026 USP32Q8NFA0 1604 aa13.21□□□□□ -0.29
LINC00461-213ENST00000513026 SETBP1Q9Y6X0 1596 aa13.21□□□□□ -0.29
LINC00461-213ENST00000513026 CT47B1P0C2W7 299 aaPredicted RBP13.21□□□□□ -0.29
LINC00461-213ENST00000513026 PMFBP1Q8TBY8 1022 aa13.21□□□□□ -0.29
LINC00461-213ENST00000513026 LAS1LQ9Y4W2 734 aaKnown RBP13.21□□□□□ -0.29
LINC00461-213ENST00000513026 CCDC27Q2M243 656 aa13.2□□□□□ -0.3
LINC00461-213ENST00000513026 RGL3Q3MIN7 710 aa13.2□□□□□ -0.3
LINC00461-213ENST00000513026 REM2Q8IYK8 340 aaPredicted RBP13.2□□□□□ -0.3
LINC00461-213ENST00000513026 NRXN1Q9ULB1 1477 aa13.2□□□□□ -0.3
LINC00461-213ENST00000513026 ADGRL1O94910 1474 aa13.19□□□□□ -0.3
LINC00461-213ENST00000513026 L1TD1Q5T7N2 865 aaKnown RBP13.19□□□□□ -0.3
LINC00461-213ENST00000513026 LMTK2Q8IWU2 1503 aa13.18□□□□□ -0.3
LINC00461-213ENST00000513026 MAP3K4Q9Y6R4 1608 aa13.18□□□□□ -0.3
LINC00461-213ENST00000513026 PLIN1O60240 522 aa13.18□□□□□ -0.3
LINC00461-213ENST00000513026 CNGB1Q14028 1251 aaPredicted RBP13.18□□□□□ -0.3
LINC00461-213ENST00000513026 ARXQ96QS3 562 aa13.18□□□□□ -0.3
LINC00461-213ENST00000513026 ZFYVE16Q7Z3T8 1539 aa13.18□□□□□ -0.3
LINC00461-213ENST00000513026 ZNF467Q7Z7K2 595 aaPredicted RBP13.17□□□□□ -0.3
LINC00461-213ENST00000513026 WDR63Q8IWG1 891 aa13.17□□□□□ -0.3
LINC00461-213ENST00000513026 FAM43AQ8N2R8 423 aa13.17□□□□□ -0.3
LINC00461-213ENST00000513026 NSD2O96028 1365 aa13.17□□□□□ -0.3
LINC00461-213ENST00000513026 FANCAO15360 1455 aa13.16□□□□□ -0.3
LINC00461-213ENST00000513026 UPF2Q9HAU5 1272 aaKnown RBP13.16□□□□□ -0.3
LINC00461-213ENST00000513026 CLTCL1P53675 1640 aa13.16□□□□□ -0.3
LINC00461-213ENST00000513026 C20orf194Q5TEA3 1177 aa13.15□□□□□ -0.3
LINC00461-213ENST00000513026 C14orf37Q86TY3 774 aa13.15□□□□□ -0.3
LINC00461-213ENST00000513026 CLUAP1Q96AJ1 413 aa13.15□□□□□ -0.3
LINC00461-213ENST00000513026 ISY1Q9ULR0 285 aaKnown RBP13.15□□□□□ -0.3
LINC00461-213ENST00000513026 SALL2Q9Y467 1007 aaPredicted RBP13.15□□□□□ -0.3
LINC00461-213ENST00000513026 IFT172Q9UG01 1749 aa13.15□□□□□ -0.3
LINC00461-213ENST00000513026 CENPJQ9HC77 1338 aaPredicted RBP13.14□□□□□ -0.31
LINC00461-213ENST00000513026 RSPH6AQ9H0K4 717 aa13.14□□□□□ -0.31
LINC00461-213ENST00000513026 ERVK-7P63135 1459 aa13.14□□□□□ -0.31
LINC00461-213ENST00000513026 INO80Q9ULG1 1556 aaPredicted RBP13.14□□□□□ -0.31
LINC00461-213ENST00000513026 SPAG9O60271 1321 aaKnown RBP13.13□□□□□ -0.31
LINC00461-213ENST00000513026 KIF1BO60333 1816 aa13.13□□□□□ -0.31
LINC00461-213ENST00000513026 EIF5BO60841 1220 aaKnown RBP13.13□□□□□ -0.31
LINC00461-213ENST00000513026 ZCCHC11Q5TAX3 1644 aaKnown RBP13.11□□□□□ -0.31
LINC00461-213ENST00000513026 PDAP1Q13442 181 aaKnown RBP13.11□□□□□ -0.31
LINC00461-213ENST00000513026 FRAT1Q92837 279 aaPredicted RBP13.11□□□□□ -0.31
LINC00461-213ENST00000513026 RPGRIP1LQ68CZ1 1315 aa13.11□□□□□ -0.31
LINC00461-213ENST00000513026 IQSEC2Q5JU85 1478 aa13.1□□□□□ -0.31
LINC00461-213ENST00000513026 IL27Q8NEV9 243 aa13.1□□□□□ -0.31
LINC00461-213ENST00000513026 RUNDC1Q96C34 613 aa13.1□□□□□ -0.31
LINC00461-213ENST00000513026 RWDD1Q9H446 243 aaPredicted RBP13.1□□□□□ -0.31
LINC00461-213ENST00000513026 ATP7AQ04656 1500 aa13.09□□□□□ -0.31
LINC00461-213ENST00000513026 EFCAB6Q5THR3 1501 aa13.09□□□□□ -0.31
LINC00461-213ENST00000513026 CHD1O14646 1710 aa13.09□□□□□ -0.31
LINC00461-213ENST00000513026 APAF1O14727 1248 aa13.09□□□□□ -0.31
LINC00461-213ENST00000513026 PTMSP20962 102 aa13.09□□□□□ -0.31
LINC00461-213ENST00000513026 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms