RNA–Protein interactions for RNA: ENST00000513013.5

SUB1-212, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 5

Gene SUB1, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-212ENST00000513013 NLRP7Q8WX94 980 aa6.93□□□□□ -1.3
SUB1-212ENST00000513013 PHOX2BQ99453 314 aa6.93□□□□□ -1.3
SUB1-212ENST00000513013 IRF6O14896 467 aa6.92□□□□□ -1.3
SUB1-212ENST00000513013 BRPF1P55201 1214 aaPredicted RBP6.92□□□□□ -1.3
SUB1-212ENST00000513013 CYP4X1Q8N118 509 aa6.92□□□□□ -1.3
SUB1-212ENST00000513013 FAM160A2Q8N612 972 aaPredicted RBP6.92□□□□□ -1.3
SUB1-212ENST00000513013 KDM4AO75164 1064 aa6.91□□□□□ -1.3
SUB1-212ENST00000513013 CD46P15529 392 aa6.91□□□□□ -1.3
SUB1-212ENST00000513013 KRI1Q8N9T8 703 aaKnown RBP6.91□□□□□ -1.3
SUB1-212ENST00000513013 ZC3H15Q8WU90 426 aaKnown RBP6.91□□□□□ -1.3
SUB1-212ENST00000513013 PKD2L1Q9P0L9 805 aa6.9□□□□□ -1.3
SUB1-212ENST00000513013 CLCN1P35523 988 aa6.89□□□□□ -1.31
SUB1-212ENST00000513013 CTC1Q2NKJ3 1217 aa6.89□□□□□ -1.31
SUB1-212ENST00000513013 USB1Q9BQ65 265 aaKnown RBP6.89□□□□□ -1.31
SUB1-212ENST00000513013 TTC24A2A3L6 582 aaPredicted RBP6.88□□□□□ -1.31
SUB1-212ENST00000513013 MMP16P51512 607 aa6.88□□□□□ -1.31
SUB1-212ENST00000513013 MDM2Q00987 491 aaPredicted RBP6.88□□□□□ -1.31
SUB1-212ENST00000513013 RNF19BQ6ZMZ0 732 aa6.88□□□□□ -1.31
SUB1-212ENST00000513013 CRIPAKQ8N1N5 446 aa6.88□□□□□ -1.31
SUB1-212ENST00000513013 ZNF775Q96BV0 537 aaPredicted RBP6.87□□□□□ -1.31
SUB1-212ENST00000513013 GPCPD1Q9NPB8 672 aa6.87□□□□□ -1.31
SUB1-212ENST00000513013 AAASQ9NRG9 546 aa6.87□□□□□ -1.31
SUB1-212ENST00000513013 TOR4AQ9NXH8 423 aa6.87□□□□□ -1.31
SUB1-212ENST00000513013 WNT7AO00755 349 aa6.86□□□□□ -1.31
SUB1-212ENST00000513013 AXIN1O15169 862 aa6.86□□□□□ -1.31
SUB1-212ENST00000513013 AVPP01185 164 aa6.86□□□□□ -1.31
SUB1-212ENST00000513013 NEUROD2Q15784 382 aa6.86□□□□□ -1.31
SUB1-212ENST00000513013 REPIN1Q9BWE0 567 aaKnown RBP6.86□□□□□ -1.31
SUB1-212ENST00000513013 PRDM9Q9NQV7 894 aa6.86□□□□□ -1.31
SUB1-212ENST00000513013 TRIM32Q13049 653 aa6.85□□□□□ -1.31
SUB1-212ENST00000513013 NUTM1Q86Y26 1132 aa6.85□□□□□ -1.31
SUB1-212ENST00000513013 SNIP1Q8TAD8 396 aaKnown RBP6.85□□□□□ -1.31
SUB1-212ENST00000513013 CCDC102AQ96A19 550 aa6.85□□□□□ -1.31
SUB1-212ENST00000513013 ZMYND10O75800 440 aa6.84□□□□□ -1.31
SUB1-212ENST00000513013 DXOO77932 396 aaKnown RBP6.84□□□□□ -1.31
SUB1-212ENST00000513013 SMCPP49901 116 aaPredicted RBP6.84□□□□□ -1.31
SUB1-212ENST00000513013 SLC24A3Q9HC58 644 aa6.84□□□□□ -1.31
SUB1-212ENST00000513013 ST8SIA5O15466 376 aa6.83□□□□□ -1.32
SUB1-212ENST00000513013 HOXA2O43364 376 aa6.83□□□□□ -1.32
SUB1-212ENST00000513013 HOMEZQ8IX15 550 aa6.83□□□□□ -1.32
SUB1-212ENST00000513013 WNT7BP56706 349 aa6.82□□□□□ -1.32
SUB1-212ENST00000513013 FAM217BQ9NTX9 383 aaPredicted RBP6.82□□□□□ -1.32
SUB1-212ENST00000513013 CCDC24Q8N4L8 307 aa6.81□□□□□ -1.32
SUB1-212ENST00000513013 POTECB2RU33 542 aa6.8□□□□□ -1.32
SUB1-212ENST00000513013 JUNDP17535 347 aa6.8□□□□□ -1.32
SUB1-212ENST00000513013 BARGINQ6ZT62 677 aa6.8□□□□□ -1.32
SUB1-212ENST00000513013 RETREG3Q86VR2 466 aa6.8□□□□□ -1.32
SUB1-212ENST00000513013 C11orf95C9JLR9 678 aaPredicted RBP6.79□□□□□ -1.32
SUB1-212ENST00000513013 MRGPRX2Q96LB1 330 aa6.79□□□□□ -1.32
SUB1-212ENST00000513013 SENP2Q9HC62 589 aa6.79□□□□□ -1.32
SUB1-212ENST00000513013 RC3H1Q5TC82 1133 aaKnown RBP6.78□□□□□ -1.32
SUB1-212ENST00000513013 FDX1P10109 184 aa6.77□□□□□ -1.33
SUB1-212ENST00000513013 SMPD1P17405 629 aa6.77□□□□□ -1.33
SUB1-212ENST00000513013 DIXDC1Q155Q3 683 aa6.77□□□□□ -1.33
SUB1-212ENST00000513013 TREML4Q6UXN2 200 aa6.77□□□□□ -1.33
SUB1-212ENST00000513013 SPDYE5A6NIY4 337 aa6.76□□□□□ -1.33
SUB1-212ENST00000513013 C6orf229H3BNL8 230 aa6.76□□□□□ -1.33
SUB1-212ENST00000513013 SSTR3P32745 418 aaPredicted RBP6.76□□□□□ -1.33
SUB1-212ENST00000513013 TTLL12Q14166 644 aaPredicted RBP6.76□□□□□ -1.33
SUB1-212ENST00000513013 AK7Q96M32 723 aa6.76□□□□□ -1.33
SUB1-212ENST00000513013 NUDT12Q9BQG2 462 aa6.76□□□□□ -1.33
SUB1-212ENST00000513013 MS4A1P11836 297 aa6.75□□□□□ -1.33
SUB1-212ENST00000513013 HLA-CQ95604 372 aa6.75□□□□□ -1.33
SUB1-212ENST00000513013 KIFC2Q96AC6 838 aa6.75□□□□□ -1.33
SUB1-212ENST00000513013 GMPR2Q9P2T1 348 aaKnown RBP6.75□□□□□ -1.33
SUB1-212ENST00000513013 CCNYL3P0C7X3 344 aa6.74□□□□□ -1.33
SUB1-212ENST00000513013 GUCA2AQ02747 115 aa6.74□□□□□ -1.33
SUB1-212ENST00000513013 J3QL48 77 aa6.73□□□□□ -1.33
SUB1-212ENST00000513013 GJA5P36382 358 aa6.73□□□□□ -1.33
SUB1-212ENST00000513013 AMHR2Q16671 573 aa6.73□□□□□ -1.33
SUB1-212ENST00000513013 PTPRNQ16849 979 aa6.73□□□□□ -1.33
SUB1-212ENST00000513013 EHBP1Q8NDI1 1231 aa6.73□□□□□ -1.33
SUB1-212ENST00000513013 ATP13A2Q9NQ11 1180 aa6.73□□□□□ -1.33
SUB1-212ENST00000513013 DACH1Q9UI36 760 aa6.73□□□□□ -1.33
SUB1-212ENST00000513013 WFS1O76024 890 aa6.72□□□□□ -1.33
SUB1-212ENST00000513013 ALDH1A1P00352 501 aa6.72□□□□□ -1.33
SUB1-212ENST00000513013 DESI1Q6ICB0 168 aa6.72□□□□□ -1.33
SUB1-212ENST00000513013 SPIRE2Q8WWL2 714 aa6.72□□□□□ -1.33
SUB1-212ENST00000513013 SYMPKQ92797 1274 aaKnown RBP6.72□□□□□ -1.33
SUB1-212ENST00000513013 SKOR1P84550 965 aa6.71□□□□□ -1.34
SUB1-212ENST00000513013 MTMR2Q13614 643 aa6.71□□□□□ -1.34
SUB1-212ENST00000513013 TRIM47Q96LD4 638 aa6.71□□□□□ -1.34
SUB1-212ENST00000513013 WASF2Q9Y6W5 498 aa6.71□□□□□ -1.34
SUB1-212ENST00000513013 PLEKHG3A1L390 1219 aa6.7□□□□□ -1.34
SUB1-212ENST00000513013 HPS1Q92902 700 aa6.7□□□□□ -1.34
SUB1-212ENST00000513013 EVA1BQ9NVM1 165 aa6.7□□□□□ -1.34
SUB1-212ENST00000513013 PCDHGC3Q9UN70 934 aa6.7□□□□□ -1.34
SUB1-212ENST00000513013 GIGYF2Q6Y7W6 1299 aaKnown RBP6.69□□□□□ -1.34
SUB1-212ENST00000513013 PRR7Q8TB68 274 aa6.69□□□□□ -1.34
SUB1-212ENST00000513013 MOXD2PA6NHM9 499 aa6.68□□□□□ -1.34
SUB1-212ENST00000513013 SIAH2O43255 324 aa6.68□□□□□ -1.34
SUB1-212ENST00000513013 INSM1Q01101 510 aaPredicted RBP6.68□□□□□ -1.34
SUB1-212ENST00000513013 KCNH2Q12809 1159 aa6.68□□□□□ -1.34
SUB1-212ENST00000513013 PTCRAQ6ISU1 281 aaPredicted RBP6.68□□□□□ -1.34
SUB1-212ENST00000513013 BEGAINQ9BUH8 593 aa6.68□□□□□ -1.34
SUB1-212ENST00000513013 NDUFV2P19404 249 aa6.67□□□□□ -1.34
SUB1-212ENST00000513013 VARSP26640 1264 aaKnown RBP6.67□□□□□ -1.34
SUB1-212ENST00000513013 LCE2AQ5TA79 106 aaPredicted RBP6.67□□□□□ -1.34
SUB1-212ENST00000513013 UNC93B1Q9H1C4 597 aa6.67□□□□□ -1.34
SUB1-212ENST00000513013 KDM4CQ9H3R0 1056 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms