RNA–Protein interactions for RNA: ENST00000512959.1

KIT-203, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

TSL 4

Gene KIT, Length 746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-203ENST00000512959 COPS2P61201 443 aa11.92□□□□□ -0.5
KIT-203ENST00000512959 RTL5Q5HYW3 569 aaPredicted RBP11.92□□□□□ -0.5
KIT-203ENST00000512959 NUTM2DQ5VT03 806 aaPredicted RBP11.92□□□□□ -0.5
KIT-203ENST00000512959 NUTM2AQ8IVF1 878 aaPredicted RBP11.92□□□□□ -0.5
KIT-203ENST00000512959 RNF166Q96A37 237 aaPredicted RBP11.92□□□□□ -0.5
KIT-203ENST00000512959 ZBTB3Q9H5J0 574 aa11.92□□□□□ -0.5
KIT-203ENST00000512959 MTMR2Q13614 643 aa11.9□□□□□ -0.5
KIT-203ENST00000512959 TIMELESSQ9UNS1 1208 aa11.9□□□□□ -0.5
KIT-203ENST00000512959 RNF19BQ6ZMZ0 732 aa11.89□□□□□ -0.51
KIT-203ENST00000512959 PRPF38BQ5VTL8 546 aaKnown RBP11.88□□□□□ -0.51
KIT-203ENST00000512959 PPP2R2DQ66LE6 453 aa11.88□□□□□ -0.51
KIT-203ENST00000512959 C14orf37Q86TY3 774 aa11.87□□□□□ -0.51
KIT-203ENST00000512959 TSC1Q92574 1164 aa11.87□□□□□ -0.51
KIT-203ENST00000512959 TLL1O43897 1013 aa11.86□□□□□ -0.51
KIT-203ENST00000512959 NR1I2O75469 434 aa11.86□□□□□ -0.51
KIT-203ENST00000512959 MTRQ99707 1265 aa11.86□□□□□ -0.51
KIT-203ENST00000512959 CFAP99D6REC4 459 aa11.85□□□□□ -0.51
KIT-203ENST00000512959 AP1G2O75843 785 aa11.85□□□□□ -0.51
KIT-203ENST00000512959 Q3C1V9 767 aa11.85□□□□□ -0.51
KIT-203ENST00000512959 NYAP1Q6ZVC0 841 aa11.85□□□□□ -0.51
KIT-203ENST00000512959 SCUBE3Q8IX30 993 aa11.85□□□□□ -0.51
KIT-203ENST00000512959 MCM6Q14566 821 aa11.82□□□□□ -0.52
KIT-203ENST00000512959 PRR7Q8TB68 274 aa11.82□□□□□ -0.52
KIT-203ENST00000512959 FMNL1O95466 1100 aaPredicted RBP11.81□□□□□ -0.52
KIT-203ENST00000512959 RETREG3Q86VR2 466 aa11.81□□□□□ -0.52
KIT-203ENST00000512959 THAP11Q96EK4 314 aa11.81□□□□□ -0.52
KIT-203ENST00000512959 USP17L8P0C7I0 530 aa11.8□□□□□ -0.52
KIT-203ENST00000512959 BRICD5Q6PL45 260 aa11.8□□□□□ -0.52
KIT-203ENST00000512959 ZNF516Q92618 1163 aa11.8□□□□□ -0.52
KIT-203ENST00000512959 SNRKQ9NRH2 765 aa11.8□□□□□ -0.52
KIT-203ENST00000512959 SPDYE5A6NIY4 337 aa11.79□□□□□ -0.52
KIT-203ENST00000512959 TMEM259Q4ZIN3 620 aa11.79□□□□□ -0.52
KIT-203ENST00000512959 TJAP1Q5JTD0 557 aa11.79□□□□□ -0.52
KIT-203ENST00000512959 HCSTQ9UBK5 93 aa11.79□□□□□ -0.52
KIT-203ENST00000512959 ZPR1O75312 459 aa11.78□□□□□ -0.52
KIT-203ENST00000512959 FLIIQ13045 1269 aa11.78□□□□□ -0.52
KIT-203ENST00000512959 HELBQ8NG08 1087 aaPredicted RBP11.78□□□□□ -0.52
KIT-203ENST00000512959 USB1Q9BQ65 265 aaKnown RBP11.78□□□□□ -0.52
KIT-203ENST00000512959 CTDSPL2Q05D32 466 aa11.77□□□□□ -0.53
KIT-203ENST00000512959 SPSB2Q99619 263 aa11.77□□□□□ -0.53
KIT-203ENST00000512959 IL21Q9HBE4 155 aa11.77□□□□□ -0.53
KIT-203ENST00000512959 PRDM9Q9NQV7 894 aa11.77□□□□□ -0.53
KIT-203ENST00000512959 SALL2Q9Y467 1007 aaPredicted RBP11.76□□□□□ -0.53
KIT-203ENST00000512959 BANK1Q8NDB2 785 aa11.75□□□□□ -0.53
KIT-203ENST00000512959 ADH1BP00325 375 aa11.74□□□□□ -0.53
KIT-203ENST00000512959 MTMR14Q8NCE2 650 aa11.74□□□□□ -0.53
KIT-203ENST00000512959 LRRN4Q8WUT4 740 aa11.74□□□□□ -0.53
KIT-203ENST00000512959 PER1O15534 1290 aaPredicted RBP11.73□□□□□ -0.53
KIT-203ENST00000512959 FAM160A2Q8N612 972 aaPredicted RBP11.73□□□□□ -0.53
KIT-203ENST00000512959 NKX2-3Q8TAU0 364 aa11.73□□□□□ -0.53
KIT-203ENST00000512959 HMX1Q9NP08 348 aaPredicted RBP11.73□□□□□ -0.53
KIT-203ENST00000512959 UBTFP17480 764 aaKnown RBP11.72□□□□□ -0.53
KIT-203ENST00000512959 JUNDP17535 347 aa11.71□□□□□ -0.53
KIT-203ENST00000512959 MSS51Q4VC12 460 aa11.71□□□□□ -0.53
KIT-203ENST00000512959 CLUAP1Q96AJ1 413 aa11.71□□□□□ -0.53
KIT-203ENST00000512959 POM121Q96HA1 1249 aa11.71□□□□□ -0.53
KIT-203ENST00000512959 S1PR4O95977 384 aa11.67□□□□□ -0.54
KIT-203ENST00000512959 DESI1Q6ICB0 168 aa11.67□□□□□ -0.54
KIT-203ENST00000512959 ERICH6Q7L0X2 663 aa11.67□□□□□ -0.54
KIT-203ENST00000512959 SLC6A16Q9GZN6 736 aa11.67□□□□□ -0.54
KIT-203ENST00000512959 DXOO77932 396 aaKnown RBP11.66□□□□□ -0.54
KIT-203ENST00000512959 ITGBL1O95965 494 aaPredicted RBP11.66□□□□□ -0.54
KIT-203ENST00000512959 EPS8L1Q8TE68 723 aa11.66□□□□□ -0.54
KIT-203ENST00000512959 KCNC4Q03721 635 aa11.65□□□□□ -0.54
KIT-203ENST00000512959 LYPD8Q6UX82 237 aa11.65□□□□□ -0.54
KIT-203ENST00000512959 GJD4Q96KN9 370 aaPredicted RBP11.65□□□□□ -0.54
KIT-203ENST00000512959 MAP10Q9P2G4 905 aa11.65□□□□□ -0.54
KIT-203ENST00000512959 COG6Q9Y2V7 657 aa11.65□□□□□ -0.54
KIT-203ENST00000512959 MMP16P51512 607 aa11.64□□□□□ -0.55
KIT-203ENST00000512959 NR6A1Q15406 480 aa11.64□□□□□ -0.55
KIT-203ENST00000512959 PTPRNQ16849 979 aa11.64□□□□□ -0.55
KIT-203ENST00000512959 TRIM34Q9BYJ4 488 aa11.64□□□□□ -0.55
KIT-203ENST00000512959 TBC1D2BQ9UPU7 963 aa11.64□□□□□ -0.55
KIT-203ENST00000512959 ZMYND15Q9H091 742 aa11.63□□□□□ -0.55
KIT-203ENST00000512959 GDPD2Q9HCC8 539 aa11.63□□□□□ -0.55
KIT-203ENST00000512959 NUDT12Q9BQG2 462 aa11.62□□□□□ -0.55
KIT-203ENST00000512959 RAD21O60216 631 aa11.61□□□□□ -0.55
KIT-203ENST00000512959 CCNYL3P0C7X3 344 aa11.61□□□□□ -0.55
KIT-203ENST00000512959 CTHP32929 405 aa11.61□□□□□ -0.55
KIT-203ENST00000512959 ABL2P42684 1182 aa11.61□□□□□ -0.55
KIT-203ENST00000512959 CCDC24Q8N4L8 307 aa11.61□□□□□ -0.55
KIT-203ENST00000512959 NDUFB9Q9Y6M9 179 aa11.61□□□□□ -0.55
KIT-203ENST00000512959 APBB1O00213 710 aa11.6□□□□□ -0.55
KIT-203ENST00000512959 F12P00748 615 aaPredicted RBP11.6□□□□□ -0.55
KIT-203ENST00000512959 PPEF1O14829 653 aaPredicted RBP11.59□□□□□ -0.55
KIT-203ENST00000512959 FCF1Q9Y324 198 aaKnown RBP11.59□□□□□ -0.55
KIT-203ENST00000512959 SOCS7O14512 581 aa11.58□□□□□ -0.56
KIT-203ENST00000512959 PROSER2Q86WR7 435 aaPredicted RBP11.57□□□□□ -0.56
KIT-203ENST00000512959 SUPT5HO00267 1087 aaKnown RBP11.56□□□□□ -0.56
KIT-203ENST00000512959 GPR37L1O60883 481 aa11.56□□□□□ -0.56
KIT-203ENST00000512959 A6NJR5 290 aa11.55□□□□□ -0.56
KIT-203ENST00000512959 KCNH2Q12809 1159 aa11.55□□□□□ -0.56
KIT-203ENST00000512959 PRM3Q9NNZ6 103 aa11.55□□□□□ -0.56
KIT-203ENST00000512959 EVA1BQ9NVM1 165 aa11.54□□□□□ -0.56
KIT-203ENST00000512959 RNF223E7ERA6 249 aa11.53□□□□□ -0.56
KIT-203ENST00000512959 PTCRAQ6ISU1 281 aaPredicted RBP11.53□□□□□ -0.56
KIT-203ENST00000512959 PPP1R18Q6NYC8 613 aa11.52□□□□□ -0.57
KIT-203ENST00000512959 IRF5Q13568 498 aa11.51□□□□□ -0.57
KIT-203ENST00000512959 UNC93B1Q9H1C4 597 aa11.51□□□□□ -0.57
KIT-203ENST00000512959 GGCXP38435 758 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms