RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 EN1Q05925 392 aaPredicted RBP15.24■□□□□ 0.03
CLCN3-208ENST00000512813 PTPN23Q9H3S7 1636 aa15.24■□□□□ 0.03
CLCN3-208ENST00000512813 CAMTA1Q9Y6Y1 1673 aa15.23■□□□□ 0.03
CLCN3-208ENST00000512813 ONECUT3O60422 494 aaPredicted RBP15.22■□□□□ 0.03
CLCN3-208ENST00000512813 TNS1Q9HBL0 1735 aaKnown RBP15.21■□□□□ 0.03
CLCN3-208ENST00000512813 NRXN3Q9Y4C0 1643 aa15.2■□□□□ 0.02
CLCN3-208ENST00000512813 ORAI2Q96SN7 254 aa15.18■□□□□ 0.02
CLCN3-208ENST00000512813 PXDNQ92626 1479 aa15.18■□□□□ 0.02
CLCN3-208ENST00000512813 ADGRB2O60241 1585 aa15.18■□□□□ 0.02
CLCN3-208ENST00000512813 CROCC2H7BZ55 1655 aa15.18■□□□□ 0.02
CLCN3-208ENST00000512813 UTRNP46939 3433 aa15.17■□□□□ 0.02
CLCN3-208ENST00000512813 VPS72Q15906 364 aa15.17■□□□□ 0.02
CLCN3-208ENST00000512813 PPP1R1BQ9UD71 204 aaPredicted RBP15.17■□□□□ 0.02
CLCN3-208ENST00000512813 USP32Q8NFA0 1604 aa15.17■□□□□ 0.02
CLCN3-208ENST00000512813 MYOM3Q5VTT5 1437 aa15.16■□□□□ 0.02
CLCN3-208ENST00000512813 NWD2Q9ULI1 1742 aa15.14■□□□□ 0.01
CLCN3-208ENST00000512813 RRP7BPQ9NSQ0 103 aa15.14■□□□□ 0.01
CLCN3-208ENST00000512813 NPHP3Q7Z494 1330 aa15.14■□□□□ 0.01
CLCN3-208ENST00000512813 ADGRL2O95490 1459 aa15.14■□□□□ 0.01
CLCN3-208ENST00000512813 PARD3Q8TEW0 1356 aa15.13■□□□□ 0.01
CLCN3-208ENST00000512813 PLCH1Q4KWH8 1693 aa15.13■□□□□ 0.01
CLCN3-208ENST00000512813 RREB1Q92766 1687 aa15.13■□□□□ 0.01
CLCN3-208ENST00000512813 EZH2Q15910 746 aaKnown RBP15.13■□□□□ 0.01
CLCN3-208ENST00000512813 SPON1Q9HCB6 807 aa15.13■□□□□ 0.01
CLCN3-208ENST00000512813 METP08581 1390 aa15.11■□□□□ 0.01
CLCN3-208ENST00000512813 CAMKK2Q96RR4 588 aa15.11■□□□□ 0.01
CLCN3-208ENST00000512813 CHD4Q14839 1912 aa15.11■□□□□ 0.01
CLCN3-208ENST00000512813 NUP188Q5SRE5 1749 aa15.11■□□□□ 0.01
CLCN3-208ENST00000512813 CHGAP10645 457 aaKnown RBP15.1■□□□□ 0.01
CLCN3-208ENST00000512813 KCNQ2O43526 872 aa15.09■□□□□ 0.01
CLCN3-208ENST00000512813 IQGAP3Q86VI3 1631 aa15.09■□□□□ 0.01
CLCN3-208ENST00000512813 ABCC5O15440 1437 aa15.09■□□□□ 0.01
CLCN3-208ENST00000512813 A0A0G2JS52 829 aa15.07■□□□□ 0
CLCN3-208ENST00000512813 MYT1Q01538 1121 aa15.07■□□□□ 0
CLCN3-208ENST00000512813 CCDC9Q9Y3X0 531 aaKnown RBP15.07■□□□□ 0
CLCN3-208ENST00000512813 GIGYF1O75420 1035 aaPredicted RBP15.06■□□□□ 0
CLCN3-208ENST00000512813 NRAPQ86VF7 1730 aa15.04■□□□□ -0
CLCN3-208ENST00000512813 NRKQ7Z2Y5 1582 aa15.04■□□□□ -0
CLCN3-208ENST00000512813 THSD7AQ9UPZ6 1657 aa15.03■□□□□ -0
CLCN3-208ENST00000512813 XPCQ01831 940 aaPredicted RBP15.03■□□□□ -0
CLCN3-208ENST00000512813 FAM98CQ17RN3 349 aaKnown RBP15.03■□□□□ -0
CLCN3-208ENST00000512813 FAM182BQ5T319 152 aa15.03■□□□□ -0
CLCN3-208ENST00000512813 CDC42BPGQ6DT37 1551 aa15.02■□□□□ -0
CLCN3-208ENST00000512813 PRAG1Q86YV5 1406 aa15.02■□□□□ -0
CLCN3-208ENST00000512813 LRPPRCP42704 1394 aaKnown RBP15.02■□□□□ -0
CLCN3-208ENST00000512813 NBPF8Q3BBV2 869 aa15.02■□□□□ -0
CLCN3-208ENST00000512813 NBPF14Q5TI25 921 aa15.02■□□□□ -0
CLCN3-208ENST00000512813 DAPK1P53355 1430 aa15.01□□□□□ -0.01
CLCN3-208ENST00000512813 ABCA3Q99758 1704 aa15□□□□□ -0.01
CLCN3-208ENST00000512813 ANKRD30AQ9BXX3 1397 aa15□□□□□ -0.01
CLCN3-208ENST00000512813 SPATA31A3Q5VYP0 1347 aa15□□□□□ -0.01
CLCN3-208ENST00000512813 FOXO3O43524 673 aa15□□□□□ -0.01
CLCN3-208ENST00000512813 ESCO1Q5FWF5 840 aa15□□□□□ -0.01
CLCN3-208ENST00000512813 NEXMIFQ5QGS0 1516 aa15□□□□□ -0.01
CLCN3-208ENST00000512813 MYOM1P52179 1685 aa15□□□□□ -0.01
CLCN3-208ENST00000512813 ROBO2Q9HCK4 1378 aa14.99□□□□□ -0.01
CLCN3-208ENST00000512813 E9PCH4 1651 aa14.99□□□□□ -0.01
CLCN3-208ENST00000512813 TRIM37O94972 964 aa14.98□□□□□ -0.01
CLCN3-208ENST00000512813 CASZ1Q86V15 1759 aa14.98□□□□□ -0.01
CLCN3-208ENST00000512813 APBA3O96018 575 aa14.97□□□□□ -0.01
CLCN3-208ENST00000512813 CCDC144AA2RUR9 1427 aa14.96□□□□□ -0.01
CLCN3-208ENST00000512813 HFM1A2PYH4 1435 aa14.95□□□□□ -0.02
CLCN3-208ENST00000512813 HAP1P54257 671 aaPredicted RBP14.95□□□□□ -0.02
CLCN3-208ENST00000512813 FAM196AQ6ZSG2 479 aa14.95□□□□□ -0.02
CLCN3-208ENST00000512813 KIF1AQ12756 1690 aa14.93□□□□□ -0.02
CLCN3-208ENST00000512813 TNS3Q68CZ2 1445 aa14.93□□□□□ -0.02
CLCN3-208ENST00000512813 SHANK3Q9BYB0 1731 aa14.92□□□□□ -0.02
CLCN3-208ENST00000512813 DLC1Q96QB1 1528 aa14.92□□□□□ -0.02
CLCN3-208ENST00000512813 SPATA31A5Q5VU36 1347 aa14.91□□□□□ -0.02
CLCN3-208ENST00000512813 SPATA31A7Q8IWB4 1347 aa14.91□□□□□ -0.02
CLCN3-208ENST00000512813 FAM83GA6ND36 823 aa14.9□□□□□ -0.02
CLCN3-208ENST00000512813 SLC34A2O95436 690 aa14.9□□□□□ -0.02
CLCN3-208ENST00000512813 CABLES1Q8TDN4 633 aa14.9□□□□□ -0.02
CLCN3-208ENST00000512813 SYT17Q9BSW7 474 aa14.9□□□□□ -0.02
CLCN3-208ENST00000512813 ANKRD50Q9ULJ7 1429 aa14.9□□□□□ -0.02
CLCN3-208ENST00000512813 COL14A1Q05707 1796 aaKnown RBP14.89□□□□□ -0.03
CLCN3-208ENST00000512813 PTGER2P43116 358 aa14.89□□□□□ -0.03
CLCN3-208ENST00000512813 CHIC2Q9UKJ5 165 aa14.89□□□□□ -0.03
CLCN3-208ENST00000512813 RRBP1Q9P2E9 1410 aaKnown RBP14.89□□□□□ -0.03
CLCN3-208ENST00000512813 FHDC1Q9C0D6 1143 aaPredicted RBP14.88□□□□□ -0.03
CLCN3-208ENST00000512813 RGPD3A6NKT7 1758 aaPredicted RBP14.88□□□□□ -0.03
CLCN3-208ENST00000512813 RGPD4Q7Z3J3 1758 aa14.88□□□□□ -0.03
CLCN3-208ENST00000512813 BTG4Q9NY30 223 aa14.87□□□□□ -0.03
CLCN3-208ENST00000512813 NAIPQ13075 1403 aa14.86□□□□□ -0.03
CLCN3-208ENST00000512813 HSPA6P17066 643 aa14.86□□□□□ -0.03
CLCN3-208ENST00000512813 KRT28Q7Z3Y7 464 aa14.85□□□□□ -0.03
CLCN3-208ENST00000512813 ARHGEF10O15013 1369 aa14.85□□□□□ -0.03
CLCN3-208ENST00000512813 FMN2Q9NZ56 1722 aa14.84□□□□□ -0.03
CLCN3-208ENST00000512813 ZNF326Q5BKZ1 582 aaKnown RBP14.84□□□□□ -0.03
CLCN3-208ENST00000512813 ZBTB7AO95365 584 aa14.83□□□□□ -0.04
CLCN3-208ENST00000512813 ANO8Q9HCE9 1232 aaPredicted RBP14.83□□□□□ -0.04
CLCN3-208ENST00000512813 SBNO1A3KN83 1393 aa14.83□□□□□ -0.04
CLCN3-208ENST00000512813 MAP3K5Q99683 1374 aa14.83□□□□□ -0.04
CLCN3-208ENST00000512813 PDGFDQ9GZP0 370 aaPredicted RBP14.82□□□□□ -0.04
CLCN3-208ENST00000512813 NUTM2FA1L443 756 aa14.8□□□□□ -0.04
CLCN3-208ENST00000512813 PLEKHG5O94827 1062 aa14.8□□□□□ -0.04
CLCN3-208ENST00000512813 PSME1Q06323 249 aa14.8□□□□□ -0.04
CLCN3-208ENST00000512813 KANK4Q5T7N3 995 aaPredicted RBP14.8□□□□□ -0.04
CLCN3-208ENST00000512813 SPATA31A1Q5TZJ5 1347 aa14.8□□□□□ -0.04
CLCN3-208ENST00000512813 GOLGB1Q14789 3259 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms