RNA–Protein interactions for RNA: ENST00000512522.1

PDGFRA-210, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-210ENST00000512522 PTPRUQ92729 1446 aa13.95□□□□□ -0.18
PDGFRA-210ENST00000512522 PIK3R4Q99570 1358 aa13.95□□□□□ -0.18
PDGFRA-210ENST00000512522 DISP3Q9P2K9 1392 aa13.95□□□□□ -0.18
PDGFRA-210ENST00000512522 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
PDGFRA-210ENST00000512522 FAM135BQ49AJ0 1406 aa13.93□□□□□ -0.18
PDGFRA-210ENST00000512522 TMF1P82094 1093 aa13.93□□□□□ -0.18
PDGFRA-210ENST00000512522 DIEXFQ68CQ4 756 aaKnown RBP13.93□□□□□ -0.18
PDGFRA-210ENST00000512522 QRICH2Q9H0J4 1663 aa13.92□□□□□ -0.18
PDGFRA-210ENST00000512522 CPS1P31327 1500 aa13.92□□□□□ -0.18
PDGFRA-210ENST00000512522 PRAM1Q96QH2 718 aa13.92□□□□□ -0.18
PDGFRA-210ENST00000512522 HSPA2P54652 639 aa13.91□□□□□ -0.18
PDGFRA-210ENST00000512522 DDX10Q13206 875 aaKnown RBP13.91□□□□□ -0.18
PDGFRA-210ENST00000512522 XRN1Q8IZH2 1706 aaKnown RBP13.9□□□□□ -0.18
PDGFRA-210ENST00000512522 PUS7Q96PZ0 661 aaKnown RBP13.9□□□□□ -0.18
PDGFRA-210ENST00000512522 AMOTL2Q9Y2J4 779 aa13.9□□□□□ -0.18
PDGFRA-210ENST00000512522 ROBO2Q9HCK4 1378 aa13.9□□□□□ -0.18
PDGFRA-210ENST00000512522 PLEKHH1Q9ULM0 1364 aa13.9□□□□□ -0.18
PDGFRA-210ENST00000512522 CHD2O14647 1828 aaKnown RBP13.9□□□□□ -0.18
PDGFRA-210ENST00000512522 PTCH1Q13635 1447 aa13.9□□□□□ -0.19
PDGFRA-210ENST00000512522 WAPLQ7Z5K2 1190 aa13.89□□□□□ -0.19
PDGFRA-210ENST00000512522 STRCQ7RTU9 1775 aa13.88□□□□□ -0.19
PDGFRA-210ENST00000512522 CDCA8Q53HL2 280 aa13.88□□□□□ -0.19
PDGFRA-210ENST00000512522 RNF39Q9H2S5 420 aa13.88□□□□□ -0.19
PDGFRA-210ENST00000512522 POGKQ9P215 609 aa13.88□□□□□ -0.19
PDGFRA-210ENST00000512522 TULP4Q9NRJ4 1543 aa13.88□□□□□ -0.19
PDGFRA-210ENST00000512522 KCNA6P17658 529 aa13.85□□□□□ -0.19
PDGFRA-210ENST00000512522 EVC2Q86UK5 1308 aa13.85□□□□□ -0.19
PDGFRA-210ENST00000512522 NWD1Q149M9 1564 aa13.84□□□□□ -0.19
PDGFRA-210ENST00000512522 SAFB2Q14151 953 aaKnown RBP eCLIP13.84□□□□□ -0.19
PDGFRA-210ENST00000512522 MINK1Q8N4C8 1332 aaPredicted RBP13.84□□□□□ -0.19
PDGFRA-210ENST00000512522 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.84□□□□□ -0.19
PDGFRA-210ENST00000512522 ATXN8OSP0DMR3 200 aa13.83□□□□□ -0.2
PDGFRA-210ENST00000512522 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
PDGFRA-210ENST00000512522 ADGRB2O60241 1585 aa13.82□□□□□ -0.2
PDGFRA-210ENST00000512522 MYOM1P52179 1685 aa13.82□□□□□ -0.2
PDGFRA-210ENST00000512522 POLR3GLQ9BT43 218 aa13.81□□□□□ -0.2
PDGFRA-210ENST00000512522 CDK19Q9BWU1 502 aa13.81□□□□□ -0.2
PDGFRA-210ENST00000512522 WASLO00401 505 aaPredicted RBP13.8□□□□□ -0.2
PDGFRA-210ENST00000512522 PER1O15534 1290 aaPredicted RBP13.8□□□□□ -0.2
PDGFRA-210ENST00000512522 CABP2Q9NPB3 220 aa13.8□□□□□ -0.2
PDGFRA-210ENST00000512522 ATF5Q9Y2D1 282 aaPredicted RBP13.79□□□□□ -0.2
PDGFRA-210ENST00000512522 PANK3Q9H999 370 aa13.78□□□□□ -0.2
PDGFRA-210ENST00000512522 ATAD2Q6PL18 1390 aa13.78□□□□□ -0.2
PDGFRA-210ENST00000512522 NKTRP30414 1462 aaKnown RBP13.78□□□□□ -0.2
PDGFRA-210ENST00000512522 STRCP1A6NGW2 1772 aa13.78□□□□□ -0.2
PDGFRA-210ENST00000512522 MIER1Q8N108 512 aa13.77□□□□□ -0.21
PDGFRA-210ENST00000512522 NINLQ9Y2I6 1382 aa13.77□□□□□ -0.21
PDGFRA-210ENST00000512522 SRPK2P78362 688 aaKnown RBP13.76□□□□□ -0.21
PDGFRA-210ENST00000512522 SLC12A5Q9H2X9 1139 aa13.76□□□□□ -0.21
PDGFRA-210ENST00000512522 NCOA3Q9Y6Q9 1424 aa13.74□□□□□ -0.21
PDGFRA-210ENST00000512522 PRR36Q9H6K5 1346 aa13.74□□□□□ -0.21
PDGFRA-210ENST00000512522 CARD14Q9BXL6 1004 aa13.74□□□□□ -0.21
PDGFRA-210ENST00000512522 ATP7BP35670 1465 aa13.74□□□□□ -0.21
PDGFRA-210ENST00000512522 CD163L1Q9NR16 1453 aa13.74□□□□□ -0.21
PDGFRA-210ENST00000512522 ADGRL3Q9HAR2 1447 aa13.73□□□□□ -0.21
PDGFRA-210ENST00000512522 NALCNQ8IZF0 1738 aa13.73□□□□□ -0.21
PDGFRA-210ENST00000512522 NUDT16Q96DE0 195 aaKnown RBP13.73□□□□□ -0.21
PDGFRA-210ENST00000512522 ANKRD36BQ8N2N9 1353 aa13.72□□□□□ -0.21
PDGFRA-210ENST00000512522 CDC42BPGQ6DT37 1551 aa13.72□□□□□ -0.21
PDGFRA-210ENST00000512522 PROSER2Q86WR7 435 aaPredicted RBP13.72□□□□□ -0.21
PDGFRA-210ENST00000512522 CCDC61Q9Y6R9 512 aa13.72□□□□□ -0.21
PDGFRA-210ENST00000512522 USP32Q8NFA0 1604 aa13.72□□□□□ -0.21
PDGFRA-210ENST00000512522 ANP32CO43423 234 aa13.71□□□□□ -0.21
PDGFRA-210ENST00000512522 AMER1Q5JTC6 1135 aaPredicted RBP13.71□□□□□ -0.21
PDGFRA-210ENST00000512522 TMC1Q8TDI8 760 aa13.71□□□□□ -0.21
PDGFRA-210ENST00000512522 RBM33Q96EV2 1170 aaKnown RBP13.71□□□□□ -0.21
PDGFRA-210ENST00000512522 CABP1Q9NZU7 370 aa13.71□□□□□ -0.21
PDGFRA-210ENST00000512522 NPC1L1Q9UHC9 1359 aa13.71□□□□□ -0.22
PDGFRA-210ENST00000512522 FMN2Q9NZ56 1722 aa13.7□□□□□ -0.22
PDGFRA-210ENST00000512522 TOPAZ1Q8N9V7 1692 aa13.7□□□□□ -0.22
PDGFRA-210ENST00000512522 PLEKHG3A1L390 1219 aa13.7□□□□□ -0.22
PDGFRA-210ENST00000512522 PRKRIP1Q9H875 184 aaPredicted RBP13.7□□□□□ -0.22
PDGFRA-210ENST00000512522 ANKARQ7Z5J8 1434 aa13.7□□□□□ -0.22
PDGFRA-210ENST00000512522 ZNF335Q9H4Z2 1342 aaPredicted RBP13.69□□□□□ -0.22
PDGFRA-210ENST00000512522 CPSF1Q10570 1443 aaKnown RBP13.69□□□□□ -0.22
PDGFRA-210ENST00000512522 PPIP5K1Q6PFW1 1433 aa13.69□□□□□ -0.22
PDGFRA-210ENST00000512522 A0A1W2PP64 1363 aa13.69□□□□□ -0.22
PDGFRA-210ENST00000512522 TMEM94Q12767 1356 aa13.69□□□□□ -0.22
PDGFRA-210ENST00000512522 C1QBPQ07021 282 aaKnown RBP13.68□□□□□ -0.22
PDGFRA-210ENST00000512522 C19orf44Q9H6X5 657 aa13.68□□□□□ -0.22
PDGFRA-210ENST00000512522 LRRC7Q96NW7 1537 aa13.68□□□□□ -0.22
PDGFRA-210ENST00000512522 XIRP1Q702N8 1843 aaKnown RBP13.67□□□□□ -0.22
PDGFRA-210ENST00000512522 TERF2IPQ9NYB0 399 aa13.67□□□□□ -0.22
PDGFRA-210ENST00000512522 KNSTRNQ9Y448 316 aa13.67□□□□□ -0.22
PDGFRA-210ENST00000512522 KTN1Q86UP2 1357 aaKnown RBP13.67□□□□□ -0.22
PDGFRA-210ENST00000512522 DCCP43146 1447 aa13.66□□□□□ -0.22
PDGFRA-210ENST00000512522 NSD3Q9BZ95 1437 aa13.66□□□□□ -0.22
PDGFRA-210ENST00000512522 RGPD8O14715 1765 aaPredicted RBP13.66□□□□□ -0.22
PDGFRA-210ENST00000512522 PARD3Q8TEW0 1356 aa13.66□□□□□ -0.22
PDGFRA-210ENST00000512522 CCER2I3L3R5 266 aa13.65□□□□□ -0.22
PDGFRA-210ENST00000512522 RALBP1Q15311 655 aa13.65□□□□□ -0.22
PDGFRA-210ENST00000512522 POLR3AO14802 1390 aaPredicted RBP13.65□□□□□ -0.22
PDGFRA-210ENST00000512522 AKAP12Q02952 1782 aa13.65□□□□□ -0.22
PDGFRA-210ENST00000512522 ITSN1Q15811 1721 aa13.64□□□□□ -0.23
PDGFRA-210ENST00000512522 HDGFL2Q7Z4V5 671 aaPredicted RBP13.64□□□□□ -0.23
PDGFRA-210ENST00000512522 ZNF692Q9BU19 519 aaPredicted RBP13.64□□□□□ -0.23
PDGFRA-210ENST00000512522 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
PDGFRA-210ENST00000512522 NUTM2FA1L443 756 aa13.63□□□□□ -0.23
PDGFRA-210ENST00000512522 C14orf37Q86TY3 774 aa13.63□□□□□ -0.23
PDGFRA-210ENST00000512522 MON2Q7Z3U7 1717 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms