RNA–Protein interactions for RNA: ENST00000512303.1

TRIO-219, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-219ENST00000512303 ALKQ9UM73 1620 aa10.72□□□□□ -0.69
TRIO-219ENST00000512303 ADGBQ8N7X0 1667 aa10.72□□□□□ -0.69
TRIO-219ENST00000512303 PDE4AP27815 886 aa10.71□□□□□ -0.69
TRIO-219ENST00000512303 ZNF772Q68DY9 489 aaPredicted RBP10.71□□□□□ -0.69
TRIO-219ENST00000512303 LRRC9Q6ZRR7 1453 aa10.7□□□□□ -0.7
TRIO-219ENST00000512303 CEP162Q5TB80 1403 aa10.7□□□□□ -0.7
TRIO-219ENST00000512303 IQGAP1P46940 1657 aa10.69□□□□□ -0.7
TRIO-219ENST00000512303 WDR70Q9NW82 654 aa10.69□□□□□ -0.7
TRIO-219ENST00000512303 CDC42BPAQ5VT25 1732 aa10.69□□□□□ -0.7
TRIO-219ENST00000512303 MTUS2Q5JR59 1369 aa10.68□□□□□ -0.7
TRIO-219ENST00000512303 JCADQ9P266 1359 aa10.68□□□□□ -0.7
TRIO-219ENST00000512303 TSPY4P0CV99 314 aa10.68□□□□□ -0.7
TRIO-219ENST00000512303 TSPY10P0CW01 314 aa10.68□□□□□ -0.7
TRIO-219ENST00000512303 SCAF11Q99590 1463 aaKnown RBP10.68□□□□□ -0.7
TRIO-219ENST00000512303 TXNDC2Q86VQ3 553 aa10.67□□□□□ -0.7
TRIO-219ENST00000512303 MBD5Q9P267 1494 aa10.67□□□□□ -0.7
TRIO-219ENST00000512303 SPATA31A6Q5VVP1 1343 aa10.66□□□□□ -0.7
TRIO-219ENST00000512303 UPF1Q92900 1129 aaKnown RBP eCLIP10.66□□□□□ -0.7
TRIO-219ENST00000512303 LARP6Q9BRS8 491 aaKnown RBP10.66□□□□□ -0.7
TRIO-219ENST00000512303 CRISPLD2Q9H0B8 497 aa10.66□□□□□ -0.7
TRIO-219ENST00000512303 CCDC141Q6ZP82 1450 aa10.64□□□□□ -0.71
TRIO-219ENST00000512303 KCNA6P17658 529 aa10.64□□□□□ -0.71
TRIO-219ENST00000512303 GPHNQ9NQX3 736 aaPredicted RBP10.64□□□□□ -0.71
TRIO-219ENST00000512303 MEX3CQ5U5Q3 659 aaKnown RBP10.63□□□□□ -0.71
TRIO-219ENST00000512303 MSH6P52701 1360 aa10.63□□□□□ -0.71
TRIO-219ENST00000512303 TMEM94Q12767 1356 aa10.63□□□□□ -0.71
TRIO-219ENST00000512303 FGD6Q6ZV73 1430 aa10.62□□□□□ -0.71
TRIO-219ENST00000512303 RXRBP28702 533 aa10.62□□□□□ -0.71
TRIO-219ENST00000512303 TMC2Q8TDI7 906 aa10.62□□□□□ -0.71
TRIO-219ENST00000512303 SLIT1O75093 1534 aa10.62□□□□□ -0.71
TRIO-219ENST00000512303 MFSD10Q14728 455 aa10.61□□□□□ -0.71
TRIO-219ENST00000512303 C3orf67Q6ZVT6 689 aa10.61□□□□□ -0.71
TRIO-219ENST00000512303 PROSER2Q86WR7 435 aaPredicted RBP10.61□□□□□ -0.71
TRIO-219ENST00000512303 DDX27Q96GQ7 796 aaKnown RBP10.61□□□□□ -0.71
TRIO-219ENST00000512303 SLAIN2Q9P270 581 aa10.61□□□□□ -0.71
TRIO-219ENST00000512303 ERVK-7P63135 1459 aa10.61□□□□□ -0.71
TRIO-219ENST00000512303 CDK12Q9NYV4 1490 aaPredicted RBP10.61□□□□□ -0.71
TRIO-219ENST00000512303 ARHGAP23Q9P227 1491 aa10.61□□□□□ -0.71
TRIO-219ENST00000512303 POTEB2H3BUK9 544 aa10.6□□□□□ -0.71
TRIO-219ENST00000512303 ZNF644Q9H582 1327 aaPredicted RBP10.59□□□□□ -0.71
TRIO-219ENST00000512303 ABCC3O15438 1527 aa10.59□□□□□ -0.71
TRIO-219ENST00000512303 LTKP29376 864 aa10.59□□□□□ -0.71
TRIO-219ENST00000512303 TRIM26Q12899 539 aaPredicted RBP10.59□□□□□ -0.71
TRIO-219ENST00000512303 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.59□□□□□ -0.71
TRIO-219ENST00000512303 NKTRP30414 1462 aaKnown RBP10.59□□□□□ -0.71
TRIO-219ENST00000512303 ZC3H13Q5T200 1668 aaKnown RBP10.59□□□□□ -0.71
TRIO-219ENST00000512303 VPS8Q8N3P4 1428 aa10.58□□□□□ -0.72
TRIO-219ENST00000512303 LRRIQ1Q96JM4 1722 aa10.58□□□□□ -0.72
TRIO-219ENST00000512303 TMEM2Q9UHN6 1383 aa10.58□□□□□ -0.72
TRIO-219ENST00000512303 HDGFP51858 240 aaKnown RBP10.58□□□□□ -0.72
TRIO-219ENST00000512303 ARHGAP31Q2M1Z3 1444 aa10.58□□□□□ -0.72
TRIO-219ENST00000512303 NCOA3Q9Y6Q9 1424 aa10.58□□□□□ -0.72
TRIO-219ENST00000512303 C2orf72A6NCS6 295 aa10.57□□□□□ -0.72
TRIO-219ENST00000512303 KIF3CO14782 793 aa10.57□□□□□ -0.72
TRIO-219ENST00000512303 POTEJP0CG39 1038 aa10.57□□□□□ -0.72
TRIO-219ENST00000512303 TMEM92Q6UXU6 159 aa10.57□□□□□ -0.72
TRIO-219ENST00000512303 TRIM52Q96A61 297 aa10.57□□□□□ -0.72
TRIO-219ENST00000512303 PRDM15P57071 1507 aaPredicted RBP10.57□□□□□ -0.72
TRIO-219ENST00000512303 EHBP1L1Q8N3D4 1523 aa10.57□□□□□ -0.72
TRIO-219ENST00000512303 CAMSAP2Q08AD1 1489 aa10.55□□□□□ -0.72
TRIO-219ENST00000512303 ROBO1Q9Y6N7 1651 aa10.55□□□□□ -0.72
TRIO-219ENST00000512303 FOXK1P85037 733 aa10.55□□□□□ -0.72
TRIO-219ENST00000512303 DSG2Q14126 1118 aa10.55□□□□□ -0.72
TRIO-219ENST00000512303 E2F4Q16254 413 aa10.55□□□□□ -0.72
TRIO-219ENST00000512303 PPP1R15BQ5SWA1 713 aa10.55□□□□□ -0.72
TRIO-219ENST00000512303 NCOA2Q15596 1464 aa10.55□□□□□ -0.72
TRIO-219ENST00000512303 STRCP1A6NGW2 1772 aa10.54□□□□□ -0.72
TRIO-219ENST00000512303 TIAM1Q13009 1591 aa10.54□□□□□ -0.72
TRIO-219ENST00000512303 MAMSTRQ6ZN01 415 aa10.54□□□□□ -0.72
TRIO-219ENST00000512303 SLC52A1Q9NWF4 448 aa10.53□□□□□ -0.72
TRIO-219ENST00000512303 KANK1Q14678 1352 aa10.52□□□□□ -0.72
TRIO-219ENST00000512303 ARHGEF5Q12774 1597 aa10.52□□□□□ -0.72
TRIO-219ENST00000512303 SRCAPQ6ZRS2 3230 aa10.52□□□□□ -0.73
TRIO-219ENST00000512303 PLPP6Q8IY26 295 aa10.52□□□□□ -0.73
TRIO-219ENST00000512303 BCANQ96GW7 911 aa10.52□□□□□ -0.73
TRIO-219ENST00000512303 NGLY1Q96IV0 654 aa10.52□□□□□ -0.73
TRIO-219ENST00000512303 MAP3K1Q13233 1512 aa10.52□□□□□ -0.73
TRIO-219ENST00000512303 EIF2AK4Q9P2K8 1649 aaKnown RBP10.51□□□□□ -0.73
TRIO-219ENST00000512303 UBR1Q8IWV7 1749 aa10.51□□□□□ -0.73
TRIO-219ENST00000512303 ATF3P18847 181 aa10.51□□□□□ -0.73
TRIO-219ENST00000512303 SLC26A8Q96RN1 970 aa10.51□□□□□ -0.73
TRIO-219ENST00000512303 EFCAB6Q5THR3 1501 aa10.5□□□□□ -0.73
TRIO-219ENST00000512303 RBM6P78332 1123 aaKnown RBP10.5□□□□□ -0.73
TRIO-219ENST00000512303 CAMK2BQ13554 666 aa10.5□□□□□ -0.73
TRIO-219ENST00000512303 C14orf37Q86TY3 774 aa10.5□□□□□ -0.73
TRIO-219ENST00000512303 CCDC125Q86Z20 511 aa10.5□□□□□ -0.73
TRIO-219ENST00000512303 KCNV2Q8TDN2 545 aa10.5□□□□□ -0.73
TRIO-219ENST00000512303 C19orf44Q9H6X5 657 aa10.5□□□□□ -0.73
TRIO-219ENST00000512303 SCUBE2Q9NQ36 999 aa10.5□□□□□ -0.73
TRIO-219ENST00000512303 ATAD2Q6PL18 1390 aa10.5□□□□□ -0.73
TRIO-219ENST00000512303 KDM5AP29375 1690 aaKnown RBP10.48□□□□□ -0.73
TRIO-219ENST00000512303 SETD1AO15047 1707 aaKnown RBP10.48□□□□□ -0.73
TRIO-219ENST00000512303 ARHGEF1Q92888 912 aaKnown RBP10.48□□□□□ -0.73
TRIO-219ENST00000512303 ERBINQ96RT1 1412 aa10.48□□□□□ -0.73
TRIO-219ENST00000512303 DUOX2Q9NRD8 1548 aa10.48□□□□□ -0.73
TRIO-219ENST00000512303 NWD1Q149M9 1564 aa10.48□□□□□ -0.73
TRIO-219ENST00000512303 PHLPP1O60346 1717 aa10.47□□□□□ -0.73
TRIO-219ENST00000512303 IDI1Q13907 227 aa10.47□□□□□ -0.73
TRIO-219ENST00000512303 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.47□□□□□ -0.73
TRIO-219ENST00000512303 LRRC59Q96AG4 307 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms