RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 TIAM1Q13009 1591 aa11.1□□□□□ -0.63
NEK1-207ENST00000511633 NBPF8Q3BBV2 869 aa11.1□□□□□ -0.63
NEK1-207ENST00000511633 BRD4O60885 1362 aaPredicted RBP11.1□□□□□ -0.63
NEK1-207ENST00000511633 DAPK1P53355 1430 aa11.1□□□□□ -0.63
NEK1-207ENST00000511633 MCTP1Q6DN14 999 aa11.1□□□□□ -0.63
NEK1-207ENST00000511633 LNPKQ9C0E8 428 aa11.1□□□□□ -0.63
NEK1-207ENST00000511633 REC8O95072 547 aa11.1□□□□□ -0.63
NEK1-207ENST00000511633 SYNE3Q6ZMZ3 975 aa11.1□□□□□ -0.63
NEK1-207ENST00000511633 ZKSCAN1P17029 563 aaPredicted RBP11.09□□□□□ -0.63
NEK1-207ENST00000511633 CABP1Q9NZU7 370 aa11.09□□□□□ -0.63
NEK1-207ENST00000511633 THEMISQ8N1K5 641 aaPredicted RBP11.09□□□□□ -0.63
NEK1-207ENST00000511633 AMOTL1Q8IY63 956 aa11.09□□□□□ -0.63
NEK1-207ENST00000511633 CDCA7LQ96GN5 454 aa11.09□□□□□ -0.63
NEK1-207ENST00000511633 TRIM34Q9BYJ4 488 aa11.08□□□□□ -0.64
NEK1-207ENST00000511633 STRN4Q9NRL3 753 aa11.08□□□□□ -0.64
NEK1-207ENST00000511633 SUPT6HQ7KZ85 1726 aaKnown RBP11.08□□□□□ -0.64
NEK1-207ENST00000511633 NEUROD6Q96NK8 337 aa11.08□□□□□ -0.64
NEK1-207ENST00000511633 ERBINQ96RT1 1412 aa11.08□□□□□ -0.64
NEK1-207ENST00000511633 PHF14O94880 888 aa11.08□□□□□ -0.64
NEK1-207ENST00000511633 DDX11L8A8MPP1 907 aa11.08□□□□□ -0.64
NEK1-207ENST00000511633 UBTFL1P0CB47 393 aaPredicted RBP11.08□□□□□ -0.64
NEK1-207ENST00000511633 SLC26A8Q96RN1 970 aa11.08□□□□□ -0.64
NEK1-207ENST00000511633 GAS2L2Q8NHY3 880 aa11.07□□□□□ -0.64
NEK1-207ENST00000511633 KLHL34Q8N239 644 aa11.07□□□□□ -0.64
NEK1-207ENST00000511633 DDX49Q9Y6V7 483 aaKnown RBP11.07□□□□□ -0.64
NEK1-207ENST00000511633 HSP90AB4PQ58FF6 505 aa11.06□□□□□ -0.64
NEK1-207ENST00000511633 SLC52A1Q9NWF4 448 aa11.06□□□□□ -0.64
NEK1-207ENST00000511633 FAM177BA6PVY3 158 aa11.06□□□□□ -0.64
NEK1-207ENST00000511633 EPRSP07814 1512 aaKnown RBP11.06□□□□□ -0.64
NEK1-207ENST00000511633 PES1O00541 588 aaKnown RBP11.06□□□□□ -0.64
NEK1-207ENST00000511633 EXOSC9Q06265 439 aaKnown RBP11.06□□□□□ -0.64
NEK1-207ENST00000511633 PLEKHO1Q53GL0 409 aaPredicted RBP11.06□□□□□ -0.64
NEK1-207ENST00000511633 ARID3AQ99856 593 aa11.06□□□□□ -0.64
NEK1-207ENST00000511633 KIAA0586Q9BVV6 1533 aa11.06□□□□□ -0.64
NEK1-207ENST00000511633 PDE4CQ08493 712 aa11.05□□□□□ -0.64
NEK1-207ENST00000511633 ATP6V1DQ9Y5K8 247 aa11.05□□□□□ -0.64
NEK1-207ENST00000511633 ARHGEF11O15085 1522 aa11.05□□□□□ -0.64
NEK1-207ENST00000511633 RBM42Q9BTD8 480 aaKnown RBP11.05□□□□□ -0.64
NEK1-207ENST00000511633 CCDC30Q5VVM6 783 aa11.05□□□□□ -0.64
NEK1-207ENST00000511633 INTS3Q68E01 1043 aaKnown RBP11.05□□□□□ -0.64
NEK1-207ENST00000511633 CHMP4CQ96CF2 233 aa11.05□□□□□ -0.64
NEK1-207ENST00000511633 RBM33Q96EV2 1170 aaKnown RBP11.05□□□□□ -0.64
NEK1-207ENST00000511633 DNAJC5BQ9UF47 199 aa11.05□□□□□ -0.64
NEK1-207ENST00000511633 SMG6Q86US8 1419 aaKnown RBP11.05□□□□□ -0.64
NEK1-207ENST00000511633 CPLX1O14810 134 aa11.05□□□□□ -0.64
NEK1-207ENST00000511633 ERC2O15083 957 aa11.05□□□□□ -0.64
NEK1-207ENST00000511633 CPLX2Q6PUV4 134 aaKnown RBP11.05□□□□□ -0.64
NEK1-207ENST00000511633 DHX16O60231 1041 aaKnown RBP11.04□□□□□ -0.64
NEK1-207ENST00000511633 TRDNQ13061 729 aa11.04□□□□□ -0.64
NEK1-207ENST00000511633 TRIM29Q14134 588 aa11.04□□□□□ -0.64
NEK1-207ENST00000511633 RNF20Q5VTR2 975 aa11.04□□□□□ -0.64
NEK1-207ENST00000511633 SULT6B1Q6IMI4 303 aa11.04□□□□□ -0.64
NEK1-207ENST00000511633 NOC3LQ8WTT2 800 aaKnown RBP11.04□□□□□ -0.64
NEK1-207ENST00000511633 TSR2Q969E8 191 aaKnown RBP11.04□□□□□ -0.64
NEK1-207ENST00000511633 RTEL1-TNFRSF6BF6WH68 1400 aa11.04□□□□□ -0.64
NEK1-207ENST00000511633 IQGAP2Q13576 1575 aa11.04□□□□□ -0.64
NEK1-207ENST00000511633 NFXL1Q6ZNB6 911 aa11.04□□□□□ -0.64
NEK1-207ENST00000511633 TPD52L1Q16890 204 aaPredicted RBP11.04□□□□□ -0.64
NEK1-207ENST00000511633 TWISTNBQ3B726 338 aaPredicted RBP11.03□□□□□ -0.64
NEK1-207ENST00000511633 WASHC4Q2M389 1173 aa11.03□□□□□ -0.64
NEK1-207ENST00000511633 ABCA10Q8WWZ4 1543 aa11.03□□□□□ -0.64
NEK1-207ENST00000511633 FYB1O15117 783 aa11.03□□□□□ -0.64
NEK1-207ENST00000511633 FOSBP53539 338 aa11.03□□□□□ -0.64
NEK1-207ENST00000511633 ANKLE2Q86XL3 938 aa11.03□□□□□ -0.64
NEK1-207ENST00000511633 ZNF428Q96B54 188 aa11.03□□□□□ -0.64
NEK1-207ENST00000511633 C1orf115Q9H7X2 142 aa11.03□□□□□ -0.64
NEK1-207ENST00000511633 ZNF692Q9BU19 519 aaPredicted RBP11.02□□□□□ -0.64
NEK1-207ENST00000511633 NUTM2BA6NNL0 878 aaPredicted RBP11.02□□□□□ -0.65
NEK1-207ENST00000511633 NUTM2EB1AL46 878 aaPredicted RBP11.02□□□□□ -0.65
NEK1-207ENST00000511633 TATP17735 454 aaPredicted RBP11.02□□□□□ -0.65
NEK1-207ENST00000511633 NUTM2AQ8IVF1 878 aaPredicted RBP11.02□□□□□ -0.65
NEK1-207ENST00000511633 XPCQ01831 940 aaPredicted RBP11.02□□□□□ -0.65
NEK1-207ENST00000511633 CCDC27Q2M243 656 aa11.02□□□□□ -0.65
NEK1-207ENST00000511633 CTDP1Q9Y5B0 961 aaPredicted RBP11.02□□□□□ -0.65
NEK1-207ENST00000511633 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.65
NEK1-207ENST00000511633 PCF11O94913 1555 aaKnown RBP11.02□□□□□ -0.65
NEK1-207ENST00000511633 RRS1Q15050 365 aaKnown RBP11.01□□□□□ -0.65
NEK1-207ENST00000511633 PHF23Q9BUL5 403 aaPredicted RBP11.01□□□□□ -0.65
NEK1-207ENST00000511633 ERICH2A1L162 156 aa11.01□□□□□ -0.65
NEK1-207ENST00000511633 DDX54Q8TDD1 881 aaKnown RBP11.01□□□□□ -0.65
NEK1-207ENST00000511633 SURF6O75683 361 aaKnown RBP11.01□□□□□ -0.65
NEK1-207ENST00000511633 TOM1L2Q6ZVM7 507 aa11.01□□□□□ -0.65
NEK1-207ENST00000511633 NOB1Q9ULX3 412 aaKnown RBP11.01□□□□□ -0.65
NEK1-207ENST00000511633 PLB1Q6P1J6 1458 aa11.01□□□□□ -0.65
NEK1-207ENST00000511633 MAGI1Q96QZ7 1491 aaPredicted RBP11.01□□□□□ -0.65
NEK1-207ENST00000511633 VPS37CA5D8V6 355 aaPredicted RBP11.01□□□□□ -0.65
NEK1-207ENST00000511633 KIF6Q6ZMV9 814 aa11.01□□□□□ -0.65
NEK1-207ENST00000511633 LAMC3Q9Y6N6 1575 aa11□□□□□ -0.65
NEK1-207ENST00000511633 GOLGA6L19H0YKK7 550 aa11□□□□□ -0.65
NEK1-207ENST00000511633 RPGRIP1LQ68CZ1 1315 aa11□□□□□ -0.65
NEK1-207ENST00000511633 GNAI3P08754 354 aa11□□□□□ -0.65
NEK1-207ENST00000511633 C22orf23Q9BZE7 217 aa11□□□□□ -0.65
NEK1-207ENST00000511633 POGZQ7Z3K3 1410 aa11□□□□□ -0.65
NEK1-207ENST00000511633 BECN2A8MW95 431 aa11□□□□□ -0.65
NEK1-207ENST00000511633 SLC4A2P04920 1241 aa11□□□□□ -0.65
NEK1-207ENST00000511633 SAMD1Q6SPF0 538 aaPredicted RBP11□□□□□ -0.65
NEK1-207ENST00000511633 TCEAL9Q9UHQ7 104 aa11□□□□□ -0.65
NEK1-207ENST00000511633 ANO8Q9HCE9 1232 aaPredicted RBP11□□□□□ -0.65
NEK1-207ENST00000511633 CDC45O75419 566 aa10.99□□□□□ -0.65
NEK1-207ENST00000511633 BCAR3O75815 825 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms