RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 MOXD2PA6NHM9 499 aa7.25□□□□□ -1.25
CHD1-207ENST00000511628 NDUFV2P19404 249 aa7.25□□□□□ -1.25
CHD1-207ENST00000511628 TPRNQ4KMQ1 711 aa7.25□□□□□ -1.25
CHD1-207ENST00000511628 MSS51Q4VC12 460 aa7.25□□□□□ -1.25
CHD1-207ENST00000511628 CCDC24Q8N4L8 307 aa7.25□□□□□ -1.25
CHD1-207ENST00000511628 FCF1Q9Y324 198 aaKnown RBP7.25□□□□□ -1.25
CHD1-207ENST00000511628 FAM160A2Q8N612 972 aaPredicted RBP7.24□□□□□ -1.25
CHD1-207ENST00000511628 SYMPKQ92797 1274 aaKnown RBP7.24□□□□□ -1.25
CHD1-207ENST00000511628 PRDM9Q9NQV7 894 aa7.24□□□□□ -1.25
CHD1-207ENST00000511628 CSPP1Q1MSJ5 1256 aa7.23□□□□□ -1.25
CHD1-207ENST00000511628 RSPH6AQ9H0K4 717 aa7.23□□□□□ -1.25
CHD1-207ENST00000511628 RIC3Q7Z5B4 369 aa7.22□□□□□ -1.25
CHD1-207ENST00000511628 RETREG3Q86VR2 466 aa7.22□□□□□ -1.25
CHD1-207ENST00000511628 SPDYE5A6NIY4 337 aa7.21□□□□□ -1.26
CHD1-207ENST00000511628 NUTM2BA6NNL0 878 aaPredicted RBP7.21□□□□□ -1.26
CHD1-207ENST00000511628 NUTM2EB1AL46 878 aaPredicted RBP7.21□□□□□ -1.26
CHD1-207ENST00000511628 CD2BP2O95400 341 aaKnown RBP7.21□□□□□ -1.26
CHD1-207ENST00000511628 MTMR2Q13614 643 aa7.21□□□□□ -1.26
CHD1-207ENST00000511628 NEUROD2Q15784 382 aa7.21□□□□□ -1.26
CHD1-207ENST00000511628 NUTM2DQ5VT03 806 aaPredicted RBP7.21□□□□□ -1.26
CHD1-207ENST00000511628 NUTM2AQ8IVF1 878 aaPredicted RBP7.21□□□□□ -1.26
CHD1-207ENST00000511628 KDM4CQ9H3R0 1056 aa7.21□□□□□ -1.26
CHD1-207ENST00000511628 GPBP1L1Q9HC44 474 aaPredicted RBP7.21□□□□□ -1.26
CHD1-207ENST00000511628 GFRA3O60609 400 aa7.2□□□□□ -1.26
CHD1-207ENST00000511628 LAPTM4AQ15012 233 aa7.2□□□□□ -1.26
CHD1-207ENST00000511628 RSBN1LQ6PCB5 846 aaPredicted RBP7.2□□□□□ -1.26
CHD1-207ENST00000511628 TSC1Q92574 1164 aa7.2□□□□□ -1.26
CHD1-207ENST00000511628 DDRGK1Q96HY6 314 aa7.2□□□□□ -1.26
CHD1-207ENST00000511628 PCDHGC3Q9UN70 934 aa7.2□□□□□ -1.26
CHD1-207ENST00000511628 PDZRN3Q9UPQ7 1066 aa7.2□□□□□ -1.26
CHD1-207ENST00000511628 JUNDP17535 347 aa7.19□□□□□ -1.26
CHD1-207ENST00000511628 GJA5P36382 358 aa7.19□□□□□ -1.26
CHD1-207ENST00000511628 ZNF697Q5TEC3 545 aa7.19□□□□□ -1.26
CHD1-207ENST00000511628 SPRYD7Q5W111 196 aa7.19□□□□□ -1.26
CHD1-207ENST00000511628 LIAT1Q6ZQX7 453 aa7.19□□□□□ -1.26
CHD1-207ENST00000511628 ZNF598Q86UK7 904 aaKnown RBP7.19□□□□□ -1.26
CHD1-207ENST00000511628 ZBTB3Q9H5J0 574 aa7.19□□□□□ -1.26
CHD1-207ENST00000511628 SPTLC1O15269 473 aa7.18□□□□□ -1.26
CHD1-207ENST00000511628 DXOO77932 396 aaKnown RBP7.18□□□□□ -1.26
CHD1-207ENST00000511628 RPIAP49247 311 aa7.18□□□□□ -1.26
CHD1-207ENST00000511628 MMP16P51512 607 aa7.18□□□□□ -1.26
CHD1-207ENST00000511628 FOXC1Q12948 553 aa7.18□□□□□ -1.26
CHD1-207ENST00000511628 MYSM1Q5VVJ2 828 aa7.18□□□□□ -1.26
CHD1-207ENST00000511628 Q6ZNB5 142 aa7.18□□□□□ -1.26
CHD1-207ENST00000511628 PRR7Q8TB68 274 aa7.18□□□□□ -1.26
CHD1-207ENST00000511628 POLR3EQ9NVU0 708 aa7.18□□□□□ -1.26
CHD1-207ENST00000511628 PLA2G2CQ5R387 149 aa7.17□□□□□ -1.26
CHD1-207ENST00000511628 NUDT12Q9BQG2 462 aa7.17□□□□□ -1.26
CHD1-207ENST00000511628 CLK2P49760 499 aaKnown RBP7.16□□□□□ -1.26
CHD1-207ENST00000511628 PCDHB15Q9Y5E8 787 aa7.16□□□□□ -1.26
CHD1-207ENST00000511628 HRCP23327 699 aa7.15□□□□□ -1.26
CHD1-207ENST00000511628 PRPF38BQ5VTL8 546 aaKnown RBP7.15□□□□□ -1.26
CHD1-207ENST00000511628 CABLES1Q8TDN4 633 aa7.15□□□□□ -1.26
CHD1-207ENST00000511628 FAM117AQ9C073 453 aa7.15□□□□□ -1.26
CHD1-207ENST00000511628 TNFRSF10AO00220 468 aa7.14□□□□□ -1.27
CHD1-207ENST00000511628 NRG2O14511 850 aaPredicted RBP7.14□□□□□ -1.27
CHD1-207ENST00000511628 CCNYL3P0C7X3 344 aa7.14□□□□□ -1.27
CHD1-207ENST00000511628 CTHP32929 405 aa7.14□□□□□ -1.27
CHD1-207ENST00000511628 LIMD1Q9UGP4 676 aa7.14□□□□□ -1.27
CHD1-207ENST00000511628 TRIM32Q13049 653 aa7.13□□□□□ -1.27
CHD1-207ENST00000511628 PTPRNQ16849 979 aa7.13□□□□□ -1.27
CHD1-207ENST00000511628 HELBQ8NG08 1087 aaPredicted RBP7.13□□□□□ -1.27
CHD1-207ENST00000511628 EMID1Q96A84 441 aaPredicted RBP7.13□□□□□ -1.27
CHD1-207ENST00000511628 SKIV2LQ15477 1246 aaKnown RBP7.11□□□□□ -1.27
CHD1-207ENST00000511628 QPCTQ16769 361 aa7.11□□□□□ -1.27
CHD1-207ENST00000511628 PKDCCQ504Y2 493 aa7.11□□□□□ -1.27
CHD1-207ENST00000511628 DESI1Q6ICB0 168 aa7.11□□□□□ -1.27
CHD1-207ENST00000511628 CYP4X1Q8N118 509 aa7.11□□□□□ -1.27
CHD1-207ENST00000511628 IL27Q8NEV9 243 aa7.11□□□□□ -1.27
CHD1-207ENST00000511628 TTC24A2A3L6 582 aaPredicted RBP7.1□□□□□ -1.27
CHD1-207ENST00000511628 FAM187AA6NFU0 413 aa7.1□□□□□ -1.27
CHD1-207ENST00000511628 CFAP99D6REC4 459 aa7.1□□□□□ -1.27
CHD1-207ENST00000511628 TUSC1Q2TAM9 212 aa7.1□□□□□ -1.27
CHD1-207ENST00000511628 SH3D19Q5HYK7 790 aa7.1□□□□□ -1.27
CHD1-207ENST00000511628 LILRB3O75022 631 aa7.09□□□□□ -1.27
CHD1-207ENST00000511628 KCNH2Q12809 1159 aa7.09□□□□□ -1.27
CHD1-207ENST00000511628 PCMTD1Q96MG8 357 aaPredicted RBP7.09□□□□□ -1.27
CHD1-207ENST00000511628 PRR20EP86478 221 aa7.08□□□□□ -1.28
CHD1-207ENST00000511628 PRR20CP86479 221 aa7.08□□□□□ -1.28
CHD1-207ENST00000511628 PRR20DP86480 221 aa7.08□□□□□ -1.28
CHD1-207ENST00000511628 PRR20BP86481 221 aa7.08□□□□□ -1.28
CHD1-207ENST00000511628 PRR20AP86496 221 aa7.08□□□□□ -1.28
CHD1-207ENST00000511628 RTL5Q5HYW3 569 aaPredicted RBP7.08□□□□□ -1.28
CHD1-207ENST00000511628 LYPD8Q6UX82 237 aa7.08□□□□□ -1.28
CHD1-207ENST00000511628 EVA1BQ9NVM1 165 aa7.08□□□□□ -1.28
CHD1-207ENST00000511628 GDF9O60383 454 aa7.07□□□□□ -1.28
CHD1-207ENST00000511628 BRPF1P55201 1214 aaPredicted RBP7.07□□□□□ -1.28
CHD1-207ENST00000511628 WNT7BP56706 349 aa7.07□□□□□ -1.28
CHD1-207ENST00000511628 LINC01559Q495D7 138 aa7.07□□□□□ -1.28
CHD1-207ENST00000511628 EHBP1Q8NDI1 1231 aa7.07□□□□□ -1.28
CHD1-207ENST00000511628 UNC93B1Q9H1C4 597 aa7.07□□□□□ -1.28
CHD1-207ENST00000511628 PLEKHG3A1L390 1219 aa7.06□□□□□ -1.28
CHD1-207ENST00000511628 WNT7AO00755 349 aa7.06□□□□□ -1.28
CHD1-207ENST00000511628 AGERQ15109 404 aa7.06□□□□□ -1.28
CHD1-207ENST00000511628 RC3H1Q5TC82 1133 aaKnown RBP7.06□□□□□ -1.28
CHD1-207ENST00000511628 PTCRAQ6ISU1 281 aaPredicted RBP7.06□□□□□ -1.28
CHD1-207ENST00000511628 TRAF7Q6Q0C0 670 aa7.06□□□□□ -1.28
CHD1-207ENST00000511628 TRIM67Q6ZTA4 783 aa7.06□□□□□ -1.28
CHD1-207ENST00000511628 PROCA1Q8NCQ7 364 aaPredicted RBP7.06□□□□□ -1.28
CHD1-207ENST00000511628 PKD2L1Q9P0L9 805 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms