RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 RNF19BQ6ZMZ0 732 aa8.22□□□□□ -1.09
TOPBP1-208ENST00000511439 FAM187AA6NFU0 413 aa8.21□□□□□ -1.1
TOPBP1-208ENST00000511439 MMP16P51512 607 aa8.2□□□□□ -1.1
TOPBP1-208ENST00000511439 ZNF787Q6DD87 383 aa8.2□□□□□ -1.1
TOPBP1-208ENST00000511439 USB1Q9BQ65 265 aaKnown RBP8.2□□□□□ -1.1
TOPBP1-208ENST00000511439 PRDM9Q9NQV7 894 aa8.2□□□□□ -1.1
TOPBP1-208ENST00000511439 FAM217BQ9NTX9 383 aaPredicted RBP8.2□□□□□ -1.1
TOPBP1-208ENST00000511439 HOXA2O43364 376 aa8.19□□□□□ -1.1
TOPBP1-208ENST00000511439 FOXC1Q12948 553 aa8.19□□□□□ -1.1
TOPBP1-208ENST00000511439 NUTM1Q86Y26 1132 aa8.19□□□□□ -1.1
TOPBP1-208ENST00000511439 MYT1Q01538 1121 aa8.18□□□□□ -1.1
TOPBP1-208ENST00000511439 PKD2L1Q9P0L9 805 aa8.18□□□□□ -1.1
TOPBP1-208ENST00000511439 NISCHQ9Y2I1 1504 aa8.17□□□□□ -1.1
TOPBP1-208ENST00000511439 DXOO77932 396 aaKnown RBP8.16□□□□□ -1.1
TOPBP1-208ENST00000511439 BARGINQ6ZT62 677 aa8.16□□□□□ -1.1
TOPBP1-208ENST00000511439 CYP4X1Q8N118 509 aa8.16□□□□□ -1.1
TOPBP1-208ENST00000511439 ZMYND10O75800 440 aa8.14□□□□□ -1.11
TOPBP1-208ENST00000511439 TRIM32Q13049 653 aa8.14□□□□□ -1.11
TOPBP1-208ENST00000511439 TOR4AQ9NXH8 423 aa8.14□□□□□ -1.11
TOPBP1-208ENST00000511439 WNT7AO00755 349 aa8.13□□□□□ -1.11
TOPBP1-208ENST00000511439 TTLL12Q14166 644 aaPredicted RBP8.13□□□□□ -1.11
TOPBP1-208ENST00000511439 REPIN1Q9BWE0 567 aaKnown RBP8.13□□□□□ -1.11
TOPBP1-208ENST00000511439 SSTR3P32745 418 aaPredicted RBP8.12□□□□□ -1.11
TOPBP1-208ENST00000511439 AMHR2Q16671 573 aa8.12□□□□□ -1.11
TOPBP1-208ENST00000511439 RETREG3Q86VR2 466 aa8.12□□□□□ -1.11
TOPBP1-208ENST00000511439 CRIPAKQ8N1N5 446 aa8.12□□□□□ -1.11
TOPBP1-208ENST00000511439 HLA-CQ95604 372 aa8.12□□□□□ -1.11
TOPBP1-208ENST00000511439 TTC24A2A3L6 582 aaPredicted RBP8.11□□□□□ -1.11
TOPBP1-208ENST00000511439 AVPP01185 164 aa8.11□□□□□ -1.11
TOPBP1-208ENST00000511439 JUNDP17535 347 aa8.11□□□□□ -1.11
TOPBP1-208ENST00000511439 CTC1Q2NKJ3 1217 aa8.11□□□□□ -1.11
TOPBP1-208ENST00000511439 CCDC24Q8N4L8 307 aa8.11□□□□□ -1.11
TOPBP1-208ENST00000511439 ZC3H15Q8WU90 426 aaKnown RBP8.11□□□□□ -1.11
TOPBP1-208ENST00000511439 FDX1P10109 184 aa8.1□□□□□ -1.11
TOPBP1-208ENST00000511439 AAASQ9NRG9 546 aa8.1□□□□□ -1.11
TOPBP1-208ENST00000511439 WNT7BP56706 349 aa8.09□□□□□ -1.11
TOPBP1-208ENST00000511439 GUCA2AQ02747 115 aa8.09□□□□□ -1.11
TOPBP1-208ENST00000511439 DIXDC1Q155Q3 683 aa8.09□□□□□ -1.11
TOPBP1-208ENST00000511439 SNIP1Q8TAD8 396 aaKnown RBP8.09□□□□□ -1.11
TOPBP1-208ENST00000511439 C6orf229H3BNL8 230 aa8.08□□□□□ -1.12
TOPBP1-208ENST00000511439 AXIN1O15169 862 aa8.08□□□□□ -1.12
TOPBP1-208ENST00000511439 SPDYE5A6NIY4 337 aa8.07□□□□□ -1.12
TOPBP1-208ENST00000511439 ST8SIA5O15466 376 aa8.07□□□□□ -1.12
TOPBP1-208ENST00000511439 SMCPP49901 116 aaPredicted RBP8.07□□□□□ -1.12
TOPBP1-208ENST00000511439 GIGYF2Q6Y7W6 1299 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-208ENST00000511439 SPIRE2Q8WWL2 714 aa8.07□□□□□ -1.12
TOPBP1-208ENST00000511439 NUDT12Q9BQG2 462 aa8.07□□□□□ -1.12
TOPBP1-208ENST00000511439 TPRNQ4KMQ1 711 aa8.06□□□□□ -1.12
TOPBP1-208ENST00000511439 SYMPKQ92797 1274 aaKnown RBP8.06□□□□□ -1.12
TOPBP1-208ENST00000511439 MRGPRX2Q96LB1 330 aa8.06□□□□□ -1.12
TOPBP1-208ENST00000511439 PRKCSHP14314 528 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-208ENST00000511439 GJA5P36382 358 aa8.05□□□□□ -1.12
TOPBP1-208ENST00000511439 ZNF775Q96BV0 537 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-208ENST00000511439 MS4A1P11836 297 aa8.04□□□□□ -1.12
TOPBP1-208ENST00000511439 RC3H1Q5TC82 1133 aaKnown RBP8.04□□□□□ -1.12
TOPBP1-208ENST00000511439 AK7Q96M32 723 aa8.04□□□□□ -1.12
TOPBP1-208ENST00000511439 BEGAINQ9BUH8 593 aa8.04□□□□□ -1.12
TOPBP1-208ENST00000511439 PCDHGC3Q9UN70 934 aa8.04□□□□□ -1.12
TOPBP1-208ENST00000511439 MOXD2PA6NHM9 499 aa8.03□□□□□ -1.12
TOPBP1-208ENST00000511439 CCNYL3P0C7X3 344 aa8.03□□□□□ -1.12
TOPBP1-208ENST00000511439 MTMR2Q13614 643 aa8.03□□□□□ -1.12
TOPBP1-208ENST00000511439 PTPRNQ16849 979 aa8.03□□□□□ -1.12
TOPBP1-208ENST00000511439 DESI1Q6ICB0 168 aa8.03□□□□□ -1.12
TOPBP1-208ENST00000511439 SMPD1P17405 629 aa8.02□□□□□ -1.13
TOPBP1-208ENST00000511439 POTECB2RU33 542 aa8.01□□□□□ -1.13
TOPBP1-208ENST00000511439 TRIM66O15016 1216 aa8.01□□□□□ -1.13
TOPBP1-208ENST00000511439 NDUFV2P19404 249 aa8.01□□□□□ -1.13
TOPBP1-208ENST00000511439 SKOR1P84550 965 aa8.01□□□□□ -1.13
TOPBP1-208ENST00000511439 PARP9Q8IXQ6 854 aa8.01□□□□□ -1.13
TOPBP1-208ENST00000511439 EHBP1Q8NDI1 1231 aa8□□□□□ -1.13
TOPBP1-208ENST00000511439 PRR7Q8TB68 274 aa8□□□□□ -1.13
TOPBP1-208ENST00000511439 TBC1D2Q9BYX2 928 aa7.99□□□□□ -1.13
TOPBP1-208ENST00000511439 EVA1BQ9NVM1 165 aa7.99□□□□□ -1.13
TOPBP1-208ENST00000511439 C11orf95C9JLR9 678 aaPredicted RBP7.98□□□□□ -1.13
TOPBP1-208ENST00000511439 J3QL48 77 aa7.98□□□□□ -1.13
TOPBP1-208ENST00000511439 RSBN1LQ6PCB5 846 aaPredicted RBP7.98□□□□□ -1.13
TOPBP1-208ENST00000511439 KCNH2Q12809 1159 aa7.97□□□□□ -1.13
TOPBP1-208ENST00000511439 PTCRAQ6ISU1 281 aaPredicted RBP7.97□□□□□ -1.13
TOPBP1-208ENST00000511439 UNC93B1Q9H1C4 597 aa7.97□□□□□ -1.13
TOPBP1-208ENST00000511439 SENP2Q9HC62 589 aa7.97□□□□□ -1.13
TOPBP1-208ENST00000511439 GMPR2Q9P2T1 348 aaKnown RBP7.97□□□□□ -1.13
TOPBP1-208ENST00000511439 DACH1Q9UI36 760 aa7.97□□□□□ -1.13
TOPBP1-208ENST00000511439 SPTLC1O15269 473 aa7.96□□□□□ -1.14
TOPBP1-208ENST00000511439 ALDH1A1P00352 501 aa7.96□□□□□ -1.14
TOPBP1-208ENST00000511439 PRPF38BQ5VTL8 546 aaKnown RBP7.96□□□□□ -1.14
TOPBP1-208ENST00000511439 ZBTB3Q9H5J0 574 aa7.96□□□□□ -1.14
TOPBP1-208ENST00000511439 HPS1Q92902 700 aa7.95□□□□□ -1.14
TOPBP1-208ENST00000511439 KIFC2Q96AC6 838 aa7.95□□□□□ -1.14
TOPBP1-208ENST00000511439 ATP13A2Q9NQ11 1180 aa7.95□□□□□ -1.14
TOPBP1-208ENST00000511439 WASF2Q9Y6W5 498 aa7.95□□□□□ -1.14
TOPBP1-208ENST00000511439 SIAH2O43255 324 aa7.94□□□□□ -1.14
TOPBP1-208ENST00000511439 SH3BP2P78314 561 aa7.94□□□□□ -1.14
TOPBP1-208ENST00000511439 RIC3Q7Z5B4 369 aa7.94□□□□□ -1.14
TOPBP1-208ENST00000511439 PLEKHG3A1L390 1219 aa7.93□□□□□ -1.14
TOPBP1-208ENST00000511439 VARSP26640 1264 aaKnown RBP7.93□□□□□ -1.14
TOPBP1-208ENST00000511439 PDE4DQ08499 809 aa7.93□□□□□ -1.14
TOPBP1-208ENST00000511439 LYPD8Q6UX82 237 aa7.93□□□□□ -1.14
TOPBP1-208ENST00000511439 TREML4Q6UXN2 200 aa7.93□□□□□ -1.14
TOPBP1-208ENST00000511439 HRCP23327 699 aa7.92□□□□□ -1.14
TOPBP1-208ENST00000511439 CTHP32929 405 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms