RNA–Protein interactions for RNA: ENST00000511342.1

TUSC3-211, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-211ENST00000511342 USB1Q9BQ65 265 aaKnown RBP12.39□□□□□ -0.43
TUSC3-211ENST00000511342 CD2BP2O95400 341 aaKnown RBP12.38□□□□□ -0.43
TUSC3-211ENST00000511342 PRDM9Q9NQV7 894 aa12.38□□□□□ -0.43
TUSC3-211ENST00000511342 DGAT1O75907 488 aa12.37□□□□□ -0.43
TUSC3-211ENST00000511342 NUTM1Q86Y26 1132 aa12.36□□□□□ -0.43
TUSC3-211ENST00000511342 DXOO77932 396 aaKnown RBP12.35□□□□□ -0.43
TUSC3-211ENST00000511342 REPIN1Q9BWE0 567 aaKnown RBP12.35□□□□□ -0.43
TUSC3-211ENST00000511342 SSTR3P32745 418 aaPredicted RBP12.34□□□□□ -0.43
TUSC3-211ENST00000511342 PKDCCQ504Y2 493 aa12.33□□□□□ -0.44
TUSC3-211ENST00000511342 PKD2L1Q9P0L9 805 aa12.33□□□□□ -0.44
TUSC3-211ENST00000511342 NISCHQ9Y2I1 1504 aa12.32□□□□□ -0.44
TUSC3-211ENST00000511342 ZBTB24O43167 697 aaPredicted RBP12.32□□□□□ -0.44
TUSC3-211ENST00000511342 TTLL12Q14166 644 aaPredicted RBP12.32□□□□□ -0.44
TUSC3-211ENST00000511342 HLA-CQ95604 372 aa12.31□□□□□ -0.44
TUSC3-211ENST00000511342 TNFRSF10AO00220 468 aa12.3□□□□□ -0.44
TUSC3-211ENST00000511342 RETREG3Q86VR2 466 aa12.29□□□□□ -0.44
TUSC3-211ENST00000511342 GIGYF2Q6Y7W6 1299 aaKnown RBP12.28□□□□□ -0.44
TUSC3-211ENST00000511342 FDX1P10109 184 aa12.27□□□□□ -0.45
TUSC3-211ENST00000511342 SPIRE2Q8WWL2 714 aa12.27□□□□□ -0.45
TUSC3-211ENST00000511342 AK7Q96M32 723 aa12.27□□□□□ -0.45
TUSC3-211ENST00000511342 MYT1Q01538 1121 aa12.26□□□□□ -0.45
TUSC3-211ENST00000511342 GUCA2AQ02747 115 aa12.26□□□□□ -0.45
TUSC3-211ENST00000511342 FAM187AA6NFU0 413 aa12.25□□□□□ -0.45
TUSC3-211ENST00000511342 JUNDP17535 347 aa12.25□□□□□ -0.45
TUSC3-211ENST00000511342 GJA5P36382 358 aa12.25□□□□□ -0.45
TUSC3-211ENST00000511342 FOXC1Q12948 553 aa12.25□□□□□ -0.45
TUSC3-211ENST00000511342 TRIM32Q13049 653 aa12.25□□□□□ -0.45
TUSC3-211ENST00000511342 DIXDC1Q155Q3 683 aa12.25□□□□□ -0.45
TUSC3-211ENST00000511342 TOR4AQ9NXH8 423 aa12.25□□□□□ -0.45
TUSC3-211ENST00000511342 TRIM66O15016 1216 aa12.24□□□□□ -0.45
TUSC3-211ENST00000511342 WNT7AO00755 349 aa12.23□□□□□ -0.45
TUSC3-211ENST00000511342 PARP9Q8IXQ6 854 aa12.23□□□□□ -0.45
TUSC3-211ENST00000511342 PCDHGC3Q9UN70 934 aa12.23□□□□□ -0.45
TUSC3-211ENST00000511342 CYP4X1Q8N118 509 aa12.21□□□□□ -0.45
TUSC3-211ENST00000511342 BEGAINQ9BUH8 593 aa12.21□□□□□ -0.45
TUSC3-211ENST00000511342 SPDYE5A6NIY4 337 aa12.2□□□□□ -0.46
TUSC3-211ENST00000511342 CRIPAKQ8N1N5 446 aa12.2□□□□□ -0.46
TUSC3-211ENST00000511342 SYMPKQ92797 1274 aaKnown RBP12.2□□□□□ -0.46
TUSC3-211ENST00000511342 MOXD2PA6NHM9 499 aa12.19□□□□□ -0.46
TUSC3-211ENST00000511342 AVPP01185 164 aa12.19□□□□□ -0.46
TUSC3-211ENST00000511342 WNT7BP56706 349 aa12.19□□□□□ -0.46
TUSC3-211ENST00000511342 ZNF787Q6DD87 383 aa12.19□□□□□ -0.46
TUSC3-211ENST00000511342 C6orf229H3BNL8 230 aa12.18□□□□□ -0.46
TUSC3-211ENST00000511342 DESI1Q6ICB0 168 aa12.17□□□□□ -0.46
TUSC3-211ENST00000511342 CCDC24Q8N4L8 307 aa12.17□□□□□ -0.46
TUSC3-211ENST00000511342 NUDT12Q9BQG2 462 aa12.17□□□□□ -0.46
TUSC3-211ENST00000511342 NDUFV2P19404 249 aa12.16□□□□□ -0.46
TUSC3-211ENST00000511342 TBC1D2Q9BYX2 928 aa12.16□□□□□ -0.46
TUSC3-211ENST00000511342 MS4A1P11836 297 aa12.15□□□□□ -0.46
TUSC3-211ENST00000511342 CTC1Q2NKJ3 1217 aa12.15□□□□□ -0.46
TUSC3-211ENST00000511342 SNIP1Q8TAD8 396 aaKnown RBP12.15□□□□□ -0.46
TUSC3-211ENST00000511342 MTMR2Q13614 643 aa12.14□□□□□ -0.47
TUSC3-211ENST00000511342 PTPRNQ16849 979 aa12.14□□□□□ -0.47
TUSC3-211ENST00000511342 AAASQ9NRG9 546 aa12.14□□□□□ -0.47
TUSC3-211ENST00000511342 TTC24A2A3L6 582 aaPredicted RBP12.13□□□□□ -0.47
TUSC3-211ENST00000511342 CCNYL3P0C7X3 344 aa12.13□□□□□ -0.47
TUSC3-211ENST00000511342 SMCPP49901 116 aaPredicted RBP12.13□□□□□ -0.47
TUSC3-211ENST00000511342 RSBN1LQ6PCB5 846 aaPredicted RBP12.13□□□□□ -0.47
TUSC3-211ENST00000511342 SPTLC1O15269 473 aa12.12□□□□□ -0.47
TUSC3-211ENST00000511342 PDE4DQ08499 809 aa12.12□□□□□ -0.47
TUSC3-211ENST00000511342 MRGPRX2Q96LB1 330 aa12.12□□□□□ -0.47
TUSC3-211ENST00000511342 SKOR1P84550 965 aa12.1□□□□□ -0.47
TUSC3-211ENST00000511342 RC3H1Q5TC82 1133 aaKnown RBP12.1□□□□□ -0.47
TUSC3-211ENST00000511342 PRPF38BQ5VTL8 546 aaKnown RBP12.1□□□□□ -0.47
TUSC3-211ENST00000511342 PRR7Q8TB68 274 aa12.1□□□□□ -0.47
TUSC3-211ENST00000511342 EVA1BQ9NVM1 165 aa12.09□□□□□ -0.47
TUSC3-211ENST00000511342 ST8SIA5O15466 376 aa12.08□□□□□ -0.48
TUSC3-211ENST00000511342 SMPD1P17405 629 aa12.08□□□□□ -0.48
TUSC3-211ENST00000511342 AXIN1O15169 862 aa12.07□□□□□ -0.48
TUSC3-211ENST00000511342 TUSC1Q2TAM9 212 aa12.07□□□□□ -0.48
TUSC3-211ENST00000511342 PTCRAQ6ISU1 281 aaPredicted RBP12.07□□□□□ -0.48
TUSC3-211ENST00000511342 SLC24A3Q9HC58 644 aa12.07□□□□□ -0.48
TUSC3-211ENST00000511342 ZBTB3Q9H5J0 574 aa12.06□□□□□ -0.48
TUSC3-211ENST00000511342 KCNH2Q12809 1159 aa12.05□□□□□ -0.48
TUSC3-211ENST00000511342 RIC3Q7Z5B4 369 aa12.05□□□□□ -0.48
TUSC3-211ENST00000511342 HRCP23327 699 aa12.03□□□□□ -0.48
TUSC3-211ENST00000511342 LYPD8Q6UX82 237 aa12.03□□□□□ -0.48
TUSC3-211ENST00000511342 UNC93B1Q9H1C4 597 aa12.03□□□□□ -0.48
TUSC3-211ENST00000511342 PCDHB15Q9Y5E8 787 aa12.03□□□□□ -0.48
TUSC3-211ENST00000511342 J3QL48 77 aa12.01□□□□□ -0.49
TUSC3-211ENST00000511342 SIAH2O43255 324 aa12.01□□□□□ -0.49
TUSC3-211ENST00000511342 MYSM1Q5VVJ2 828 aa12.01□□□□□ -0.49
TUSC3-211ENST00000511342 BCANQ96GW7 911 aa12.01□□□□□ -0.49
TUSC3-211ENST00000511342 POTECB2RU33 542 aa12□□□□□ -0.49
TUSC3-211ENST00000511342 SH3BP2P78314 561 aa12□□□□□ -0.49
TUSC3-211ENST00000511342 EHBP1Q8NDI1 1231 aa12□□□□□ -0.49
TUSC3-211ENST00000511342 CFAP99D6REC4 459 aa11.99□□□□□ -0.49
TUSC3-211ENST00000511342 ZNF775Q96BV0 537 aaPredicted RBP11.99□□□□□ -0.49
TUSC3-211ENST00000511342 RSPH6AQ9H0K4 717 aa11.99□□□□□ -0.49
TUSC3-211ENST00000511342 MPNDQ8N594 471 aa11.97□□□□□ -0.49
TUSC3-211ENST00000511342 ZNF511Q8NB15 262 aa11.96□□□□□ -0.49
TUSC3-211ENST00000511342 LIMD1Q9UGP4 676 aa11.96□□□□□ -0.49
TUSC3-211ENST00000511342 DACH1Q9UI36 760 aa11.96□□□□□ -0.49
TUSC3-211ENST00000511342 LILRB3O75022 631 aa11.95□□□□□ -0.5
TUSC3-211ENST00000511342 ALDH1A1P00352 501 aa11.95□□□□□ -0.5
TUSC3-211ENST00000511342 F12P00748 615 aaPredicted RBP11.95□□□□□ -0.5
TUSC3-211ENST00000511342 VARSP26640 1264 aaKnown RBP11.95□□□□□ -0.5
TUSC3-211ENST00000511342 BAP1Q92560 729 aa11.95□□□□□ -0.5
TUSC3-211ENST00000511342 HPS1Q92902 700 aa11.95□□□□□ -0.5
TUSC3-211ENST00000511342 CABLES1Q8TDN4 633 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms