RNA–Protein interactions for RNA: ENST00000511303.5

SGCA-207, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-207ENST00000511303 NCKAP5LQ9HCH0 1330 aa16.36■□□□□ 0.21
SGCA-207ENST00000511303 ATAD2Q6PL18 1390 aa16.36■□□□□ 0.21
SGCA-207ENST00000511303 KTN1Q86UP2 1357 aaKnown RBP16.36■□□□□ 0.21
SGCA-207ENST00000511303 ROBO2Q9HCK4 1378 aa16.36■□□□□ 0.21
SGCA-207ENST00000511303 KNDC1Q76NI1 1749 aa16.36■□□□□ 0.21
SGCA-207ENST00000511303 KCNA6P17658 529 aa16.35■□□□□ 0.21
SGCA-207ENST00000511303 SAFB2Q14151 953 aaKnown RBP eCLIP16.35■□□□□ 0.21
SGCA-207ENST00000511303 MINK1Q8N4C8 1332 aaPredicted RBP16.35■□□□□ 0.21
SGCA-207ENST00000511303 QRICH2Q9H0J4 1663 aa16.34■□□□□ 0.21
SGCA-207ENST00000511303 WASLO00401 505 aaPredicted RBP16.34■□□□□ 0.21
SGCA-207ENST00000511303 CDK19Q9BWU1 502 aa16.34■□□□□ 0.21
SGCA-207ENST00000511303 SRPK2P78362 688 aaKnown RBP16.33■□□□□ 0.2
SGCA-207ENST00000511303 PRKRIP1Q9H875 184 aaPredicted RBP16.32■□□□□ 0.2
SGCA-207ENST00000511303 PLEKHH1Q9ULM0 1364 aa16.32■□□□□ 0.2
SGCA-207ENST00000511303 TULP4Q9NRJ4 1543 aa16.31■□□□□ 0.2
SGCA-207ENST00000511303 LMTK3Q96Q04 1460 aa16.31■□□□□ 0.2
SGCA-207ENST00000511303 NPC1L1Q9UHC9 1359 aa16.31■□□□□ 0.2
SGCA-207ENST00000511303 RALBP1Q15311 655 aa16.31■□□□□ 0.2
SGCA-207ENST00000511303 KNSTRNQ9Y448 316 aa16.31■□□□□ 0.2
SGCA-207ENST00000511303 CABP2Q9NPB3 220 aa16.3■□□□□ 0.2
SGCA-207ENST00000511303 TERF2IPQ9NYB0 399 aa16.29■□□□□ 0.2
SGCA-207ENST00000511303 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
SGCA-207ENST00000511303 HSPA2P54652 639 aa16.28■□□□□ 0.2
SGCA-207ENST00000511303 ILDR1Q86SU0 546 aaPredicted RBP16.28■□□□□ 0.2
SGCA-207ENST00000511303 TMC1Q8TDI8 760 aa16.28■□□□□ 0.2
SGCA-207ENST00000511303 SLC12A5Q9H2X9 1139 aa16.28■□□□□ 0.2
SGCA-207ENST00000511303 CCDC61Q9Y6R9 512 aa16.28■□□□□ 0.2
SGCA-207ENST00000511303 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.19
SGCA-207ENST00000511303 ANKRD36BQ8N2N9 1353 aa16.26■□□□□ 0.19
SGCA-207ENST00000511303 NUDT16Q96DE0 195 aaKnown RBP16.25■□□□□ 0.19
SGCA-207ENST00000511303 NCOA3Q9Y6Q9 1424 aa16.25■□□□□ 0.19
SGCA-207ENST00000511303 ADGRB2O60241 1585 aa16.25■□□□□ 0.19
SGCA-207ENST00000511303 CHD2O14647 1828 aaKnown RBP16.24■□□□□ 0.19
SGCA-207ENST00000511303 AMER1Q5JTC6 1135 aaPredicted RBP16.24■□□□□ 0.19
SGCA-207ENST00000511303 HDGFL2Q7Z4V5 671 aaPredicted RBP16.24■□□□□ 0.19
SGCA-207ENST00000511303 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
SGCA-207ENST00000511303 CARD14Q9BXL6 1004 aa16.24■□□□□ 0.19
SGCA-207ENST00000511303 CABP1Q9NZU7 370 aa16.23■□□□□ 0.19
SGCA-207ENST00000511303 PLEKHG3A1L390 1219 aa16.22■□□□□ 0.19
SGCA-207ENST00000511303 NKTRP30414 1462 aaKnown RBP16.22■□□□□ 0.19
SGCA-207ENST00000511303 NWD1Q149M9 1564 aa16.21■□□□□ 0.19
SGCA-207ENST00000511303 PROSER2Q86WR7 435 aaPredicted RBP16.21■□□□□ 0.19
SGCA-207ENST00000511303 PARD3Q8TEW0 1356 aa16.21■□□□□ 0.19
SGCA-207ENST00000511303 CGNL1Q0VF96 1302 aa16.2■□□□□ 0.18
SGCA-207ENST00000511303 ANKARQ7Z5J8 1434 aa16.2■□□□□ 0.18
SGCA-207ENST00000511303 ATP7BP35670 1465 aa16.2■□□□□ 0.18
SGCA-207ENST00000511303 MYOM1P52179 1685 aa16.2■□□□□ 0.18
SGCA-207ENST00000511303 MYBBP1AQ9BQG0 1328 aaKnown RBP16.19■□□□□ 0.18
SGCA-207ENST00000511303 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.19■□□□□ 0.18
SGCA-207ENST00000511303 NSD2O96028 1365 aa16.19■□□□□ 0.18
SGCA-207ENST00000511303 C19orf44Q9H6X5 657 aa16.18■□□□□ 0.18
SGCA-207ENST00000511303 CPSF1Q10570 1443 aaKnown RBP16.18■□□□□ 0.18
SGCA-207ENST00000511303 ADGRL3Q9HAR2 1447 aa16.18■□□□□ 0.18
SGCA-207ENST00000511303 NLRP13Q86W25 1043 aa16.17■□□□□ 0.18
SGCA-207ENST00000511303 PPIP5K1Q6PFW1 1433 aa16.17■□□□□ 0.18
SGCA-207ENST00000511303 PRR36Q9H6K5 1346 aa16.17■□□□□ 0.18
SGCA-207ENST00000511303 A0A1W2PP64 1363 aa16.16■□□□□ 0.18
SGCA-207ENST00000511303 CC2D1BQ5T0F9 858 aaKnown RBP16.16■□□□□ 0.18
SGCA-207ENST00000511303 NSD3Q9BZ95 1437 aa16.16■□□□□ 0.18
SGCA-207ENST00000511303 BRD4O60885 1362 aaPredicted RBP16.15■□□□□ 0.18
SGCA-207ENST00000511303 CD163L1Q9NR16 1453 aa16.15■□□□□ 0.18
SGCA-207ENST00000511303 CDC42BPGQ6DT37 1551 aa16.13■□□□□ 0.17
SGCA-207ENST00000511303 STRCQ7RTU9 1775 aa16.13■□□□□ 0.17
SGCA-207ENST00000511303 EDC4Q6P2E9 1401 aaKnown RBP16.13■□□□□ 0.17
SGCA-207ENST00000511303 C14orf37Q86TY3 774 aa16.13■□□□□ 0.17
SGCA-207ENST00000511303 DCCP43146 1447 aa16.12■□□□□ 0.17
SGCA-207ENST00000511303 MORC1Q86VD1 984 aa16.12■□□□□ 0.17
SGCA-207ENST00000511303 MRS2Q9HD23 443 aa16.12■□□□□ 0.17
SGCA-207ENST00000511303 POLR3AO14802 1390 aaPredicted RBP16.12■□□□□ 0.17
SGCA-207ENST00000511303 USP32Q8NFA0 1604 aa16.12■□□□□ 0.17
SGCA-207ENST00000511303 FYB1O15117 783 aa16.11■□□□□ 0.17
SGCA-207ENST00000511303 ACEP12821 1306 aa16.11■□□□□ 0.17
SGCA-207ENST00000511303 TMEM94Q12767 1356 aa16.11■□□□□ 0.17
SGCA-207ENST00000511303 ATF3P18847 181 aa16.09■□□□□ 0.17
SGCA-207ENST00000511303 PPP2R1AP30153 589 aa16.09■□□□□ 0.17
SGCA-207ENST00000511303 CADPS2Q86UW7 1296 aa16.09■□□□□ 0.17
SGCA-207ENST00000511303 NGDNQ8NEJ9 315 aaKnown RBP16.09■□□□□ 0.17
SGCA-207ENST00000511303 PHF8Q9UPP1 1060 aa16.08■□□□□ 0.16
SGCA-207ENST00000511303 NUTM2FA1L443 756 aa16.07■□□□□ 0.16
SGCA-207ENST00000511303 CNGB1Q14028 1251 aaPredicted RBP16.07■□□□□ 0.16
SGCA-207ENST00000511303 TTC21AQ8NDW8 1320 aa16.07■□□□□ 0.16
SGCA-207ENST00000511303 SCAF1Q9H7N4 1312 aaKnown RBP16.07■□□□□ 0.16
SGCA-207ENST00000511303 MSH6P52701 1360 aa16.06■□□□□ 0.16
SGCA-207ENST00000511303 PNISRQ8TF01 805 aaKnown RBP16.06■□□□□ 0.16
SGCA-207ENST00000511303 FMN2Q9NZ56 1722 aa16.05■□□□□ 0.16
SGCA-207ENST00000511303 USP6P35125 1406 aa16.05■□□□□ 0.16
SGCA-207ENST00000511303 TTC21BQ7Z4L5 1316 aa16.05■□□□□ 0.16
SGCA-207ENST00000511303 ZNF335Q9H4Z2 1342 aaPredicted RBP16.05■□□□□ 0.16
SGCA-207ENST00000511303 CCDC184Q52MB2 194 aa16.05■□□□□ 0.16
SGCA-207ENST00000511303 RBM33Q96EV2 1170 aaKnown RBP16.05■□□□□ 0.16
SGCA-207ENST00000511303 TOPAZ1Q8N9V7 1692 aa16.05■□□□□ 0.16
SGCA-207ENST00000511303 SSH2Q76I76 1423 aa16.04■□□□□ 0.16
SGCA-207ENST00000511303 ESCO1Q5FWF5 840 aa16.04■□□□□ 0.16
SGCA-207ENST00000511303 PMFBP1Q8TBY8 1022 aa16.04■□□□□ 0.16
SGCA-207ENST00000511303 NALCNQ8IZF0 1738 aa16.04■□□□□ 0.16
SGCA-207ENST00000511303 INSRP06213 1382 aa16.03■□□□□ 0.16
SGCA-207ENST00000511303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.03■□□□□ 0.16
SGCA-207ENST00000511303 GGNBP2Q9H3C7 697 aa16.03■□□□□ 0.16
SGCA-207ENST00000511303 LRRC7Q96NW7 1537 aa16.03■□□□□ 0.16
SGCA-207ENST00000511303 ITSN1Q15811 1721 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms