RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 FUT2Q10981 343 aa9.82□□□□□ -0.84
HMGB1P47-201ENST00000511281 ADAMTS19Q8TE59 1207 aa9.82□□□□□ -0.84
HMGB1P47-201ENST00000511281 SEPT9Q9UHD8 586 aaPredicted RBP9.82□□□□□ -0.84
HMGB1P47-201ENST00000511281 VPS9D1Q9Y2B5 631 aa9.82□□□□□ -0.84
HMGB1P47-201ENST00000511281 ATP6V1AP38606 617 aa9.81□□□□□ -0.84
HMGB1P47-201ENST00000511281 DMRTA1Q5VZB9 504 aa9.81□□□□□ -0.84
HMGB1P47-201ENST00000511281 RETREG2Q8NC44 543 aa9.81□□□□□ -0.84
HMGB1P47-201ENST00000511281 BHMG1C9JSJ3 638 aaPredicted RBP9.8□□□□□ -0.84
HMGB1P47-201ENST00000511281 CFHP08603 1231 aa9.8□□□□□ -0.84
HMGB1P47-201ENST00000511281 PDE4CQ08493 712 aa9.79□□□□□ -0.84
HMGB1P47-201ENST00000511281 DESI1Q6ICB0 168 aa9.79□□□□□ -0.84
HMGB1P47-201ENST00000511281 SAMD7Q7Z3H4 446 aa9.79□□□□□ -0.84
HMGB1P47-201ENST00000511281 OTUD5Q96G74 571 aa9.79□□□□□ -0.84
HMGB1P47-201ENST00000511281 SOX11P35716 441 aa9.78□□□□□ -0.84
HMGB1P47-201ENST00000511281 VARS2Q5ST30 1063 aaKnown RBP9.78□□□□□ -0.84
HMGB1P47-201ENST00000511281 HDGFL1Q5TGJ6 251 aa9.78□□□□□ -0.84
HMGB1P47-201ENST00000511281 LRRN4Q8WUT4 740 aa9.78□□□□□ -0.84
HMGB1P47-201ENST00000511281 PBXIP1Q96AQ6 731 aa9.78□□□□□ -0.84
HMGB1P47-201ENST00000511281 NBPF3Q9H094 633 aa9.78□□□□□ -0.84
HMGB1P47-201ENST00000511281 ALG2Q9H553 416 aa9.78□□□□□ -0.84
HMGB1P47-201ENST00000511281 ERBB3P21860 1342 aa9.78□□□□□ -0.84
HMGB1P47-201ENST00000511281 TK2O00142 265 aa9.77□□□□□ -0.85
HMGB1P47-201ENST00000511281 SRPK2P78362 688 aaKnown RBP9.77□□□□□ -0.85
HMGB1P47-201ENST00000511281 C6orf229H3BNL8 230 aa9.76□□□□□ -0.85
HMGB1P47-201ENST00000511281 KMT5BQ4FZB7 885 aa9.76□□□□□ -0.85
HMGB1P47-201ENST00000511281 RETREG3Q86VR2 466 aa9.76□□□□□ -0.85
HMGB1P47-201ENST00000511281 ZNF687Q8N1G0 1237 aa9.76□□□□□ -0.85
HMGB1P47-201ENST00000511281 CCDC9Q9Y3X0 531 aaKnown RBP9.76□□□□□ -0.85
HMGB1P47-201ENST00000511281 MORN1Q5T089 497 aa9.75□□□□□ -0.85
HMGB1P47-201ENST00000511281 CFAP70Q5T0N1 1121 aa9.75□□□□□ -0.85
HMGB1P47-201ENST00000511281 PRR7Q8TB68 274 aa9.75□□□□□ -0.85
HMGB1P47-201ENST00000511281 ACIN1Q9UKV3 1341 aaKnown RBP9.75□□□□□ -0.85
HMGB1P47-201ENST00000511281 ACTN4O43707 911 aaKnown RBP9.74□□□□□ -0.85
HMGB1P47-201ENST00000511281 ZFRQ96KR1 1074 aaKnown RBP9.74□□□□□ -0.85
HMGB1P47-201ENST00000511281 Q3C1V9 767 aa9.73□□□□□ -0.85
HMGB1P47-201ENST00000511281 EPS8L1Q8TE68 723 aa9.73□□□□□ -0.85
HMGB1P47-201ENST00000511281 PPP1R12CQ9BZL4 782 aa9.73□□□□□ -0.85
HMGB1P47-201ENST00000511281 USTQ9Y2C2 406 aa9.73□□□□□ -0.85
HMGB1P47-201ENST00000511281 AXIN2Q9Y2T1 843 aa9.73□□□□□ -0.85
HMGB1P47-201ENST00000511281 VAC14Q08AM6 782 aa9.72□□□□□ -0.85
HMGB1P47-201ENST00000511281 SALL2Q9Y467 1007 aaPredicted RBP9.72□□□□□ -0.85
HMGB1P47-201ENST00000511281 SYMPKQ92797 1274 aaKnown RBP9.71□□□□□ -0.86
HMGB1P47-201ENST00000511281 PRR14Q9BWN1 585 aa9.71□□□□□ -0.86
HMGB1P47-201ENST00000511281 LHX8Q68G74 356 aa9.7□□□□□ -0.86
HMGB1P47-201ENST00000511281 LYPD8Q6UX82 237 aa9.7□□□□□ -0.86
HMGB1P47-201ENST00000511281 TSC1Q92574 1164 aa9.7□□□□□ -0.86
HMGB1P47-201ENST00000511281 UCN2Q96RP3 112 aa9.7□□□□□ -0.86
HMGB1P47-201ENST00000511281 PALM3A6NDB9 673 aaPredicted RBP9.69□□□□□ -0.86
HMGB1P47-201ENST00000511281 PER1O15534 1290 aaPredicted RBP9.69□□□□□ -0.86
HMGB1P47-201ENST00000511281 NR6A1Q15406 480 aa9.69□□□□□ -0.86
HMGB1P47-201ENST00000511281 SLC27A5Q9Y2P5 690 aa9.69□□□□□ -0.86
HMGB1P47-201ENST00000511281 PATL2C9JE40 543 aaKnown RBP9.68□□□□□ -0.86
HMGB1P47-201ENST00000511281 ST18O60284 1047 aa9.68□□□□□ -0.86
HMGB1P47-201ENST00000511281 PNMA1Q8ND90 353 aa9.68□□□□□ -0.86
HMGB1P47-201ENST00000511281 EMP3P54852 163 aa9.67□□□□□ -0.86
HMGB1P47-201ENST00000511281 LRCH3Q96II8 777 aa9.67□□□□□ -0.86
HMGB1P47-201ENST00000511281 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.66□□□□□ -0.86
HMGB1P47-201ENST00000511281 MRPL50Q8N5N7 158 aaKnown RBP9.66□□□□□ -0.86
HMGB1P47-201ENST00000511281 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.66□□□□□ -0.86
HMGB1P47-201ENST00000511281 ZC3H4Q9UPT8 1303 aaKnown RBP9.65□□□□□ -0.86
HMGB1P47-201ENST00000511281 HRO43593 1189 aa9.65□□□□□ -0.86
HMGB1P47-201ENST00000511281 AEBP1Q8IUX7 1158 aa9.65□□□□□ -0.86
HMGB1P47-201ENST00000511281 RNF40O75150 1001 aa9.64□□□□□ -0.87
HMGB1P47-201ENST00000511281 ATG7O95352 703 aa9.64□□□□□ -0.87
HMGB1P47-201ENST00000511281 BRD1O95696 1058 aa9.64□□□□□ -0.87
HMGB1P47-201ENST00000511281 F12P00748 615 aaPredicted RBP9.64□□□□□ -0.87
HMGB1P47-201ENST00000511281 NR1H3Q13133 447 aa9.64□□□□□ -0.87
HMGB1P47-201ENST00000511281 BRICD5Q6PL45 260 aa9.64□□□□□ -0.87
HMGB1P47-201ENST00000511281 USB1Q9BQ65 265 aaKnown RBP9.64□□□□□ -0.87
HMGB1P47-201ENST00000511281 MAFBQ9Y5Q3 323 aaPredicted RBP9.64□□□□□ -0.87
HMGB1P47-201ENST00000511281 RANGAP1P46060 587 aaPredicted RBP9.63□□□□□ -0.87
HMGB1P47-201ENST00000511281 EIF4G2P78344 907 aaKnown RBP eCLIP9.63□□□□□ -0.87
HMGB1P47-201ENST00000511281 KCNA1Q09470 495 aa9.63□□□□□ -0.87
HMGB1P47-201ENST00000511281 SEMA3FQ13275 785 aa9.63□□□□□ -0.87
HMGB1P47-201ENST00000511281 PUS10Q3MIT2 529 aaKnown RBP9.63□□□□□ -0.87
HMGB1P47-201ENST00000511281 ADGRD1Q6QNK2 874 aa9.63□□□□□ -0.87
HMGB1P47-201ENST00000511281 NPM2Q86SE8 214 aaKnown RBP9.63□□□□□ -0.87
HMGB1P47-201ENST00000511281 THAP11Q96EK4 314 aa9.63□□□□□ -0.87
HMGB1P47-201ENST00000511281 TFIP11Q9UBB9 837 aaKnown RBP9.63□□□□□ -0.87
HMGB1P47-201ENST00000511281 CSB-PGBD3P0DP91 1061 aa9.62□□□□□ -0.87
HMGB1P47-201ENST00000511281 RNF19BQ6ZMZ0 732 aa9.62□□□□□ -0.87
HMGB1P47-201ENST00000511281 NFATC2IPQ8NCF5 419 aa9.62□□□□□ -0.87
HMGB1P47-201ENST00000511281 RFX1P22670 979 aa9.61□□□□□ -0.87
HMGB1P47-201ENST00000511281 LMOD1P29536 600 aaPredicted RBP9.61□□□□□ -0.87
HMGB1P47-201ENST00000511281 LSM11P83369 360 aaKnown RBP eCLIP9.61□□□□□ -0.87
HMGB1P47-201ENST00000511281 PTPRNQ16849 979 aa9.61□□□□□ -0.87
HMGB1P47-201ENST00000511281 BLOC1S3Q6QNY0 202 aa9.61□□□□□ -0.87
HMGB1P47-201ENST00000511281 FKBPLQ9UIM3 349 aa9.61□□□□□ -0.87
HMGB1P47-201ENST00000511281 SOWAHBA6NEL2 793 aa9.6□□□□□ -0.87
HMGB1P47-201ENST00000511281 FAM205CA6NFA0 338 aa9.6□□□□□ -0.87
HMGB1P47-201ENST00000511281 ATP9BO43861 1147 aa9.6□□□□□ -0.87
HMGB1P47-201ENST00000511281 POTEB3A0JP26 581 aa9.59□□□□□ -0.87
HMGB1P47-201ENST00000511281 ZBBXA8MT70 800 aa9.59□□□□□ -0.87
HMGB1P47-201ENST00000511281 FBXO45P0C2W1 286 aa9.59□□□□□ -0.87
HMGB1P47-201ENST00000511281 POTEBQ6S5H4 581 aa9.59□□□□□ -0.87
HMGB1P47-201ENST00000511281 ANKK1Q8NFD2 765 aa9.59□□□□□ -0.87
HMGB1P47-201ENST00000511281 MARVELD3Q96A59 401 aa9.59□□□□□ -0.87
HMGB1P47-201ENST00000511281 HS3ST6Q96QI5 342 aa9.59□□□□□ -0.87
HMGB1P47-201ENST00000511281 TMEM88BA6NKF7 163 aa9.58□□□□□ -0.88
HMGB1P47-201ENST00000511281 FMNL1O95466 1100 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms