RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 EPRSP07814 1512 aaKnown RBP17.45■□□□□ 0.38
PRDM16-206ENST00000511072 ESPNB1AK53 854 aa17.44■□□□□ 0.38
PRDM16-206ENST00000511072 NLRP2Q9NX02 1062 aa17.44■□□□□ 0.38
PRDM16-206ENST00000511072 ZHX1Q9UKY1 873 aaPredicted RBP17.44■□□□□ 0.38
PRDM16-206ENST00000511072 MRC2Q9UBG0 1479 aa17.44■□□□□ 0.38
PRDM16-206ENST00000511072 REC8O95072 547 aa17.44■□□□□ 0.38
PRDM16-206ENST00000511072 PDZRN3Q9UPQ7 1066 aa17.44■□□□□ 0.38
PRDM16-206ENST00000511072 EHBP1L1Q8N3D4 1523 aa17.43■□□□□ 0.38
PRDM16-206ENST00000511072 CLCN1P35523 988 aa17.43■□□□□ 0.38
PRDM16-206ENST00000511072 SULT6B1Q6IMI4 303 aa17.43■□□□□ 0.38
PRDM16-206ENST00000511072 CDK19Q9BWU1 502 aa17.43■□□□□ 0.38
PRDM16-206ENST00000511072 PRDM10Q9NQV6 1147 aa17.43■□□□□ 0.38
PRDM16-206ENST00000511072 PLB1Q6P1J6 1458 aa17.43■□□□□ 0.38
PRDM16-206ENST00000511072 PTMSP20962 102 aa17.43■□□□□ 0.38
PRDM16-206ENST00000511072 ABTB2Q8N961 1025 aa17.42■□□□□ 0.38
PRDM16-206ENST00000511072 HMGXB3Q12766 1538 aa17.42■□□□□ 0.38
PRDM16-206ENST00000511072 DDX11L8A8MPP1 907 aa17.42■□□□□ 0.38
PRDM16-206ENST00000511072 ANKRD30BQ9BXX2 1392 aa17.41■□□□□ 0.38
PRDM16-206ENST00000511072 IFIT2P09913 472 aaKnown RBP17.41■□□□□ 0.38
PRDM16-206ENST00000511072 XRCC6P12956 609 aaKnown RBP eCLIP17.41■□□□□ 0.38
PRDM16-206ENST00000511072 PDCL3Q9H2J4 239 aa17.41■□□□□ 0.38
PRDM16-206ENST00000511072 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.41■□□□□ 0.38
PRDM16-206ENST00000511072 IFT140Q96RY7 1462 aa17.41■□□□□ 0.38
PRDM16-206ENST00000511072 TWISTNBQ3B726 338 aaPredicted RBP17.41■□□□□ 0.38
PRDM16-206ENST00000511072 HTATSF1O43719 755 aaKnown RBP17.4■□□□□ 0.38
PRDM16-206ENST00000511072 RRS1Q15050 365 aaKnown RBP17.4■□□□□ 0.38
PRDM16-206ENST00000511072 SF3A1Q15459 793 aaKnown RBP17.4■□□□□ 0.38
PRDM16-206ENST00000511072 ARHGEF11O15085 1522 aa17.4■□□□□ 0.38
PRDM16-206ENST00000511072 RAPGEF4Q8WZA2 1011 aa17.4■□□□□ 0.38
PRDM16-206ENST00000511072 CHMP5Q9NZZ3 219 aa17.4■□□□□ 0.38
PRDM16-206ENST00000511072 NOB1Q9ULX3 412 aaKnown RBP17.4■□□□□ 0.38
PRDM16-206ENST00000511072 THUMPD2Q9BTF0 503 aaKnown RBP17.39■□□□□ 0.38
PRDM16-206ENST00000511072 TPM2P07951 284 aa17.39■□□□□ 0.37
PRDM16-206ENST00000511072 CREBRFQ8IUR6 639 aa17.38■□□□□ 0.37
PRDM16-206ENST00000511072 C20orf194Q5TEA3 1177 aa17.38■□□□□ 0.37
PRDM16-206ENST00000511072 MCTP1Q6DN14 999 aa17.38■□□□□ 0.37
PRDM16-206ENST00000511072 FAM184AQ8NB25 1140 aa17.37■□□□□ 0.37
PRDM16-206ENST00000511072 ERBINQ96RT1 1412 aa17.37■□□□□ 0.37
PRDM16-206ENST00000511072 BICRAQ9NZM4 1560 aa17.37■□□□□ 0.37
PRDM16-206ENST00000511072 H3BQV1 296 aa17.37■□□□□ 0.37
PRDM16-206ENST00000511072 IFFO2Q5TF58 517 aa17.37■□□□□ 0.37
PRDM16-206ENST00000511072 KIAA0586Q9BVV6 1533 aa17.37■□□□□ 0.37
PRDM16-206ENST00000511072 PDE3AQ14432 1141 aa17.37■□□□□ 0.37
PRDM16-206ENST00000511072 R3HCC1Q9Y3T6 440 aaKnown RBP17.37■□□□□ 0.37
PRDM16-206ENST00000511072 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.36■□□□□ 0.37
PRDM16-206ENST00000511072 ZKSCAN1P17029 563 aaPredicted RBP17.36■□□□□ 0.37
PRDM16-206ENST00000511072 G3BP1Q13283 466 aaKnown RBP eCLIP17.36■□□□□ 0.37
PRDM16-206ENST00000511072 ESCO1Q5FWF5 840 aa17.36■□□□□ 0.37
PRDM16-206ENST00000511072 ABCC5O15440 1437 aa17.36■□□□□ 0.37
PRDM16-206ENST00000511072 SURF6O75683 361 aaKnown RBP17.36■□□□□ 0.37
PRDM16-206ENST00000511072 UBTFL1P0CB47 393 aaPredicted RBP17.36■□□□□ 0.37
PRDM16-206ENST00000511072 SLC52A1Q9NWF4 448 aa17.36■□□□□ 0.37
PRDM16-206ENST00000511072 ABCA10Q8WWZ4 1543 aa17.36■□□□□ 0.37
PRDM16-206ENST00000511072 MRE11P49959 708 aa17.35■□□□□ 0.37
PRDM16-206ENST00000511072 AAMPQ13685 434 aa17.35■□□□□ 0.37
PRDM16-206ENST00000511072 SLC4A2P04920 1241 aa17.35■□□□□ 0.37
PRDM16-206ENST00000511072 WAPLQ7Z5K2 1190 aa17.35■□□□□ 0.37
PRDM16-206ENST00000511072 PCF11O94913 1555 aaKnown RBP17.35■□□□□ 0.37
PRDM16-206ENST00000511072 INTS3Q68E01 1043 aaKnown RBP17.35■□□□□ 0.37
PRDM16-206ENST00000511072 VPS37CA5D8V6 355 aaPredicted RBP17.34■□□□□ 0.37
PRDM16-206ENST00000511072 DDX58O95786 925 aaKnown RBP17.34■□□□□ 0.37
PRDM16-206ENST00000511072 RIC3Q7Z5B4 369 aa17.34■□□□□ 0.37
PRDM16-206ENST00000511072 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
PRDM16-206ENST00000511072 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
PRDM16-206ENST00000511072 CLSTN1O94985 981 aa17.33■□□□□ 0.37
PRDM16-206ENST00000511072 RASSF8Q8NHQ8 419 aa17.33■□□□□ 0.37
PRDM16-206ENST00000511072 BBXQ8WY36 941 aaPredicted RBP17.33■□□□□ 0.36
PRDM16-206ENST00000511072 NEUROD6Q96NK8 337 aa17.33■□□□□ 0.36
PRDM16-206ENST00000511072 TRAK2O60296 914 aa17.33■□□□□ 0.36
PRDM16-206ENST00000511072 APPP05067 770 aa17.33■□□□□ 0.36
PRDM16-206ENST00000511072 RUFY2Q8WXA3 655 aa17.33■□□□□ 0.36
PRDM16-206ENST00000511072 ATF7IPQ6VMQ6 1270 aa17.32■□□□□ 0.36
PRDM16-206ENST00000511072 ATF3P18847 181 aa17.31■□□□□ 0.36
PRDM16-206ENST00000511072 FOSBP53539 338 aa17.31■□□□□ 0.36
PRDM16-206ENST00000511072 ADGRF5Q8IZF2 1346 aa17.31■□□□□ 0.36
PRDM16-206ENST00000511072 CSPP1Q1MSJ5 1256 aa17.3■□□□□ 0.36
PRDM16-206ENST00000511072 ROCK1Q13464 1354 aa17.3■□□□□ 0.36
PRDM16-206ENST00000511072 GRPEL1Q9HAV7 217 aa17.3■□□□□ 0.36
PRDM16-206ENST00000511072 KIF3AQ9Y496 699 aa17.3■□□□□ 0.36
PRDM16-206ENST00000511072 NCOA1Q15788 1441 aa17.3■□□□□ 0.36
PRDM16-206ENST00000511072 XPCQ01831 940 aaPredicted RBP17.3■□□□□ 0.36
PRDM16-206ENST00000511072 DCTN1Q14203 1278 aa17.3■□□□□ 0.36
PRDM16-206ENST00000511072 CDC45O75419 566 aa17.3■□□□□ 0.36
PRDM16-206ENST00000511072 SLFN5Q08AF3 891 aa17.29■□□□□ 0.36
PRDM16-206ENST00000511072 MIS18AQ9NYP9 233 aa17.29■□□□□ 0.36
PRDM16-206ENST00000511072 BCL11BQ9C0K0 894 aaPredicted RBP17.29■□□□□ 0.36
PRDM16-206ENST00000511072 NEK4P51957 841 aa17.29■□□□□ 0.36
PRDM16-206ENST00000511072 HDGFL1Q5TGJ6 251 aa17.29■□□□□ 0.36
PRDM16-206ENST00000511072 ATP6V1DQ9Y5K8 247 aa17.28■□□□□ 0.36
PRDM16-206ENST00000511072 PHF14O94880 888 aa17.28■□□□□ 0.36
PRDM16-206ENST00000511072 HECW1Q76N89 1606 aa17.28■□□□□ 0.36
PRDM16-206ENST00000511072 TMPOP42166 694 aaKnown RBP17.27■□□□□ 0.36
PRDM16-206ENST00000511072 FBXO31Q5XUX0 539 aaPredicted RBP17.27■□□□□ 0.36
PRDM16-206ENST00000511072 SKOR2Q2VWA4 1001 aaPredicted RBP17.27■□□□□ 0.36
PRDM16-206ENST00000511072 GAS2L2Q8NHY3 880 aa17.27■□□□□ 0.36
PRDM16-206ENST00000511072 RBM33Q96EV2 1170 aaKnown RBP17.27■□□□□ 0.36
PRDM16-206ENST00000511072 MAPK8IP2Q13387 824 aaPredicted RBP17.27■□□□□ 0.35
PRDM16-206ENST00000511072 CLASRPQ8N2M8 674 aaKnown RBP17.27■□□□□ 0.35
PRDM16-206ENST00000511072 NSD3Q9BZ95 1437 aa17.27■□□□□ 0.35
PRDM16-206ENST00000511072 MAGI1Q96QZ7 1491 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms