RNA–Protein interactions for RNA: ENST00000511044.1

PCDH1-206, Transcript of protocadherin 1, humanhuman

TSL 1 (best)

Gene PCDH1, Length 2,674 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-206ENST00000511044 TEX2Q8IWB9 1127 aa15.11■□□□□ 0.01
PCDH1-206ENST00000511044 ERVK-7P63135 1459 aa15.1■□□□□ 0.01
PCDH1-206ENST00000511044 CFAP70Q5T0N1 1121 aa15.1■□□□□ 0.01
PCDH1-206ENST00000511044 CHRM1P11229 460 aaPredicted RBP15.1■□□□□ 0.01
PCDH1-206ENST00000511044 PPM1GO15355 546 aaPredicted RBP15.09■□□□□ 0.01
PCDH1-206ENST00000511044 BBXQ8WY36 941 aaPredicted RBP15.09■□□□□ 0.01
PCDH1-206ENST00000511044 TRPM1Q7Z4N2 1603 aa15.08■□□□□ 0.01
PCDH1-206ENST00000511044 FER1L4A9Z1Z3 1794 aa15.08■□□□□ 0
PCDH1-206ENST00000511044 ST20-MTHFSA0A0A6YYL1 179 aa15.08■□□□□ 0
PCDH1-206ENST00000511044 GSE1Q14687 1217 aa15.08■□□□□ 0
PCDH1-206ENST00000511044 CCDC9Q9Y3X0 531 aaKnown RBP15.08■□□□□ 0
PCDH1-206ENST00000511044 ADGRB3O60242 1522 aa15.07■□□□□ 0
PCDH1-206ENST00000511044 TMEM132EQ6IEE7 984 aa15.07■□□□□ 0
PCDH1-206ENST00000511044 RALGAPBQ86X10 1494 aa15.07■□□□□ 0
PCDH1-206ENST00000511044 MADDQ8WXG6 1647 aa15.06■□□□□ 0
PCDH1-206ENST00000511044 ARHGAP31Q2M1Z3 1444 aa15.06■□□□□ 0
PCDH1-206ENST00000511044 UHRF1BP1Q6BDS2 1440 aa15.06■□□□□ 0
PCDH1-206ENST00000511044 SECISBP2LQ93073 1101 aaKnown RBP15.06■□□□□ 0
PCDH1-206ENST00000511044 CFAP44Q96MT7 982 aa15.06■□□□□ 0
PCDH1-206ENST00000511044 PIK3C2BO00750 1634 aa15.06■□□□□ 0
PCDH1-206ENST00000511044 MYBBP1AQ9BQG0 1328 aaKnown RBP15.05■□□□□ 0
PCDH1-206ENST00000511044 RALBP1Q15311 655 aa15.05■□□□□ -0
PCDH1-206ENST00000511044 BRD4O60885 1362 aaPredicted RBP15.04■□□□□ -0
PCDH1-206ENST00000511044 RIMS1Q86UR5 1692 aaKnown RBP15.03■□□□□ -0
PCDH1-206ENST00000511044 HMGB1P09429 215 aaKnown RBP15.03■□□□□ -0
PCDH1-206ENST00000511044 RRP1P56182 461 aaKnown RBP15.03■□□□□ -0
PCDH1-206ENST00000511044 CNPY4Q8N129 248 aa15.03■□□□□ -0
PCDH1-206ENST00000511044 PPLO60437 1756 aa15.03■□□□□ -0
PCDH1-206ENST00000511044 IFT172Q9UG01 1749 aa15.03■□□□□ -0
PCDH1-206ENST00000511044 NCLP19338 710 aaKnown RBP15.02■□□□□ -0
PCDH1-206ENST00000511044 EXOC6Q8TAG9 804 aa15.02■□□□□ -0
PCDH1-206ENST00000511044 LRPPRCP42704 1394 aaKnown RBP15.02■□□□□ -0
PCDH1-206ENST00000511044 C3P01024 1663 aa15.02■□□□□ -0
PCDH1-206ENST00000511044 GTF2E1P29083 439 aaPredicted RBP15.02□□□□□ -0.01
PCDH1-206ENST00000511044 SAFB2Q14151 953 aaKnown RBP eCLIP15.02□□□□□ -0.01
PCDH1-206ENST00000511044 SLC52A1Q9NWF4 448 aa15.02□□□□□ -0.01
PCDH1-206ENST00000511044 RCAN3Q9UKA8 241 aa15.01□□□□□ -0.01
PCDH1-206ENST00000511044 TMEM131LA2VDJ0 1609 aa15.01□□□□□ -0.01
PCDH1-206ENST00000511044 STK26Q9P289 416 aa15.01□□□□□ -0.01
PCDH1-206ENST00000511044 TNRQ92752 1358 aa15□□□□□ -0.01
PCDH1-206ENST00000511044 PDE4AP27815 886 aa15□□□□□ -0.01
PCDH1-206ENST00000511044 FRAT1Q92837 279 aaPredicted RBP15□□□□□ -0.01
PCDH1-206ENST00000511044 TRAK1Q9UPV9 953 aa15□□□□□ -0.01
PCDH1-206ENST00000511044 SPATA31D1Q6ZQQ2 1576 aa15□□□□□ -0.01
PCDH1-206ENST00000511044 KTN1Q86UP2 1357 aaKnown RBP15□□□□□ -0.01
PCDH1-206ENST00000511044 NEXMIFQ5QGS0 1516 aa15□□□□□ -0.01
PCDH1-206ENST00000511044 FTSJ3Q8IY81 847 aaKnown RBP15□□□□□ -0.01
PCDH1-206ENST00000511044 TICAM2Q86XR7 235 aa14.98□□□□□ -0.01
PCDH1-206ENST00000511044 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.98□□□□□ -0.01
PCDH1-206ENST00000511044 TCERG1O14776 1098 aaKnown RBP14.97□□□□□ -0.01
PCDH1-206ENST00000511044 NLRP13Q86W25 1043 aa14.97□□□□□ -0.01
PCDH1-206ENST00000511044 NFKBIBQ15653 356 aa14.97□□□□□ -0.01
PCDH1-206ENST00000511044 BACH2Q9BYV9 841 aa14.96□□□□□ -0.01
PCDH1-206ENST00000511044 A2ML1A8K2U0 1454 aa14.96□□□□□ -0.01
PCDH1-206ENST00000511044 RNF216Q9NWF9 866 aaPredicted RBP14.95□□□□□ -0.02
PCDH1-206ENST00000511044 PDE3BQ13370 1112 aa14.95□□□□□ -0.02
PCDH1-206ENST00000511044 FAM43AQ8N2R8 423 aa14.95□□□□□ -0.02
PCDH1-206ENST00000511044 PRDM10Q9NQV6 1147 aa14.95□□□□□ -0.02
PCDH1-206ENST00000511044 MYOM2P54296 1465 aa14.94□□□□□ -0.02
PCDH1-206ENST00000511044 PIK3C2GO75747 1445 aa14.94□□□□□ -0.02
PCDH1-206ENST00000511044 VGFO15240 615 aaPredicted RBP14.94□□□□□ -0.02
PCDH1-206ENST00000511044 DISP3Q9P2K9 1392 aa14.93□□□□□ -0.02
PCDH1-206ENST00000511044 CDCA7LQ96GN5 454 aa14.93□□□□□ -0.02
PCDH1-206ENST00000511044 RIMS2Q9UQ26 1411 aa14.93□□□□□ -0.02
PCDH1-206ENST00000511044 CANXP27824 592 aaKnown RBP14.92□□□□□ -0.02
PCDH1-206ENST00000511044 CC2D1BQ5T0F9 858 aaKnown RBP14.92□□□□□ -0.02
PCDH1-206ENST00000511044 GPRASP1Q5JY77 1395 aa14.92□□□□□ -0.02
PCDH1-206ENST00000511044 PARD3Q8TEW0 1356 aa14.91□□□□□ -0.02
PCDH1-206ENST00000511044 UBR1Q8IWV7 1749 aa14.91□□□□□ -0.02
PCDH1-206ENST00000511044 PLIN1O60240 522 aa14.9□□□□□ -0.02
PCDH1-206ENST00000511044 LTKP29376 864 aa14.9□□□□□ -0.02
PCDH1-206ENST00000511044 DDRGK1Q96HY6 314 aa14.9□□□□□ -0.02
PCDH1-206ENST00000511044 STAC3Q96MF2 364 aa14.9□□□□□ -0.02
PCDH1-206ENST00000511044 SLC26A8Q96RN1 970 aa14.9□□□□□ -0.02
PCDH1-206ENST00000511044 TESK2Q96S53 571 aa14.9□□□□□ -0.02
PCDH1-206ENST00000511044 IQGAP1P46940 1657 aa14.9□□□□□ -0.02
PCDH1-206ENST00000511044 C14orf93Q9H972 538 aaKnown RBP14.89□□□□□ -0.03
PCDH1-206ENST00000511044 PER1O15534 1290 aaPredicted RBP14.89□□□□□ -0.03
PCDH1-206ENST00000511044 NRXN1Q9ULB1 1477 aa14.89□□□□□ -0.03
PCDH1-206ENST00000511044 ADAMTSL3P82987 1691 aa14.89□□□□□ -0.03
PCDH1-206ENST00000511044 MS4A1P11836 297 aa14.89□□□□□ -0.03
PCDH1-206ENST00000511044 RPGRIP1LQ68CZ1 1315 aa14.88□□□□□ -0.03
PCDH1-206ENST00000511044 NEURL4Q96JN8 1562 aa14.88□□□□□ -0.03
PCDH1-206ENST00000511044 SCAF11Q99590 1463 aaKnown RBP14.88□□□□□ -0.03
PCDH1-206ENST00000511044 SLC4A3P48751 1232 aa14.88□□□□□ -0.03
PCDH1-206ENST00000511044 PUS7Q96PZ0 661 aaKnown RBP14.88□□□□□ -0.03
PCDH1-206ENST00000511044 MYO3AQ8NEV4 1616 aa14.87□□□□□ -0.03
PCDH1-206ENST00000511044 TXNDC2Q86VQ3 553 aa14.87□□□□□ -0.03
PCDH1-206ENST00000511044 ZNF592Q92610 1267 aa14.87□□□□□ -0.03
PCDH1-206ENST00000511044 ASXL1Q8IXJ9 1541 aa14.87□□□□□ -0.03
PCDH1-206ENST00000511044 RRP9O43818 475 aaKnown RBP14.87□□□□□ -0.03
PCDH1-206ENST00000511044 KCNG1Q9UIX4 513 aa14.87□□□□□ -0.03
PCDH1-206ENST00000511044 PANK3Q9H999 370 aa14.86□□□□□ -0.03
PCDH1-206ENST00000511044 ADGRB1O14514 1584 aa14.86□□□□□ -0.03
PCDH1-206ENST00000511044 WWC1Q8IX03 1113 aa14.85□□□□□ -0.03
PCDH1-206ENST00000511044 CRBNQ96SW2 442 aa14.85□□□□□ -0.03
PCDH1-206ENST00000511044 TMEM2Q9UHN6 1383 aa14.85□□□□□ -0.03
PCDH1-206ENST00000511044 ZFYVE9O95405 1425 aa14.85□□□□□ -0.03
PCDH1-206ENST00000511044 WAPLQ7Z5K2 1190 aa14.84□□□□□ -0.03
PCDH1-206ENST00000511044 KIAA1210Q9ULL0 1709 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms