RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 PUS10Q3MIT2 529 aaKnown RBP8.67□□□□□ -1.02
MBD4-209ENST00000511009 SCUBE3Q8IX30 993 aa8.67□□□□□ -1.02
MBD4-209ENST00000511009 THAP11Q96EK4 314 aa8.67□□□□□ -1.02
MBD4-209ENST00000511009 FUT2Q10981 343 aa8.66□□□□□ -1.02
MBD4-209ENST00000511009 SULF1Q8IWU6 871 aa8.66□□□□□ -1.02
MBD4-209ENST00000511009 RDH13Q8NBN7 331 aa8.65□□□□□ -1.02
MBD4-209ENST00000511009 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.65□□□□□ -1.02
MBD4-209ENST00000511009 RSPH4AQ5TD94 716 aa8.64□□□□□ -1.03
MBD4-209ENST00000511009 PROSER2Q86WR7 435 aaPredicted RBP8.64□□□□□ -1.03
MBD4-209ENST00000511009 RNF223E7ERA6 249 aa8.63□□□□□ -1.03
MBD4-209ENST00000511009 NR1I2O75469 434 aa8.63□□□□□ -1.03
MBD4-209ENST00000511009 ADH1BP00325 375 aa8.63□□□□□ -1.03
MBD4-209ENST00000511009 NUTM1Q86Y26 1132 aa8.63□□□□□ -1.03
MBD4-209ENST00000511009 SPDYE5A6NIY4 337 aa8.62□□□□□ -1.03
MBD4-209ENST00000511009 ATP6V1AP38606 617 aa8.62□□□□□ -1.03
MBD4-209ENST00000511009 SLC27A5Q9Y2P5 690 aa8.62□□□□□ -1.03
MBD4-209ENST00000511009 S1PR4O95977 384 aa8.61□□□□□ -1.03
MBD4-209ENST00000511009 RFC5P40937 340 aa8.61□□□□□ -1.03
MBD4-209ENST00000511009 RIC3Q7Z5B4 369 aa8.61□□□□□ -1.03
MBD4-209ENST00000511009 BANK1Q8NDB2 785 aa8.61□□□□□ -1.03
MBD4-209ENST00000511009 SPIRE2Q8WWL2 714 aa8.61□□□□□ -1.03
MBD4-209ENST00000511009 PRKD2Q9BZL6 878 aa8.61□□□□□ -1.03
MBD4-209ENST00000511009 V9GY48 417 aaPredicted RBP8.61□□□□□ -1.03
MBD4-209ENST00000511009 TMEM259Q4ZIN3 620 aa8.6□□□□□ -1.03
MBD4-209ENST00000511009 BRICD5Q6PL45 260 aa8.6□□□□□ -1.03
MBD4-209ENST00000511009 CCDC82Q8N4S0 544 aa8.6□□□□□ -1.03
MBD4-209ENST00000511009 FAM160A2Q8N612 972 aaPredicted RBP8.6□□□□□ -1.03
MBD4-209ENST00000511009 LIMD1Q9UGP4 676 aa8.6□□□□□ -1.03
MBD4-209ENST00000511009 SALL2Q9Y467 1007 aaPredicted RBP8.6□□□□□ -1.03
MBD4-209ENST00000511009 POM121Q96HA1 1249 aa8.59□□□□□ -1.03
MBD4-209ENST00000511009 ZNF777Q9ULD5 760 aaPredicted RBP8.59□□□□□ -1.03
MBD4-209ENST00000511009 PPEF1O14829 653 aaPredicted RBP8.58□□□□□ -1.04
MBD4-209ENST00000511009 CSPP1Q1MSJ5 1256 aa8.58□□□□□ -1.04
MBD4-209ENST00000511009 PLA2G2CQ5R387 149 aa8.58□□□□□ -1.04
MBD4-209ENST00000511009 ANKLE1Q8NAG6 615 aa8.58□□□□□ -1.04
MBD4-209ENST00000511009 HLA-CQ95604 372 aa8.58□□□□□ -1.04
MBD4-209ENST00000511009 SPSB2Q99619 263 aa8.58□□□□□ -1.04
MBD4-209ENST00000511009 IRX2Q9BZI1 471 aaPredicted RBP8.58□□□□□ -1.04
MBD4-209ENST00000511009 KDM4AO75164 1064 aa8.57□□□□□ -1.04
MBD4-209ENST00000511009 RNF19BQ6ZMZ0 732 aa8.57□□□□□ -1.04
MBD4-209ENST00000511009 SPTLC1O15269 473 aa8.56□□□□□ -1.04
MBD4-209ENST00000511009 GGCXP38435 758 aa8.56□□□□□ -1.04
MBD4-209ENST00000511009 PPP2R2DQ66LE6 453 aa8.56□□□□□ -1.04
MBD4-209ENST00000511009 CCDC97Q96F63 343 aaPredicted RBP8.56□□□□□ -1.04
MBD4-209ENST00000511009 SLC6A16Q9GZN6 736 aa8.56□□□□□ -1.04
MBD4-209ENST00000511009 SNRKQ9NRH2 765 aa8.56□□□□□ -1.04
MBD4-209ENST00000511009 COG6Q9Y2V7 657 aa8.56□□□□□ -1.04
MBD4-209ENST00000511009 HOXA2O43364 376 aa8.55□□□□□ -1.04
MBD4-209ENST00000511009 TUSC1Q2TAM9 212 aa8.55□□□□□ -1.04
MBD4-209ENST00000511009 RSBN1LQ6PCB5 846 aaPredicted RBP8.55□□□□□ -1.04
MBD4-209ENST00000511009 LIAT1Q6ZQX7 453 aa8.55□□□□□ -1.04
MBD4-209ENST00000511009 WWC1Q8IX03 1113 aa8.55□□□□□ -1.04
MBD4-209ENST00000511009 PRM3Q9NNZ6 103 aa8.55□□□□□ -1.04
MBD4-209ENST00000511009 PODXL2Q9NZ53 605 aa8.55□□□□□ -1.04
MBD4-209ENST00000511009 MOXD2PA6NHM9 499 aa8.54□□□□□ -1.04
MBD4-209ENST00000511009 LCE2BO14633 110 aa8.54□□□□□ -1.04
MBD4-209ENST00000511009 USP46P62068 366 aa8.54□□□□□ -1.04
MBD4-209ENST00000511009 TRIM67Q6ZTA4 783 aa8.54□□□□□ -1.04
MBD4-209ENST00000511009 PRDM9Q9NQV7 894 aa8.54□□□□□ -1.04
MBD4-209ENST00000511009 NUTM2BA6NNL0 878 aaPredicted RBP8.53□□□□□ -1.04
MBD4-209ENST00000511009 NUTM2EB1AL46 878 aaPredicted RBP8.53□□□□□ -1.04
MBD4-209ENST00000511009 FMNL1O95466 1100 aaPredicted RBP8.53□□□□□ -1.04
MBD4-209ENST00000511009 MSS51Q4VC12 460 aa8.53□□□□□ -1.04
MBD4-209ENST00000511009 NUTM2DQ5VT03 806 aaPredicted RBP8.53□□□□□ -1.04
MBD4-209ENST00000511009 NUTM2AQ8IVF1 878 aaPredicted RBP8.53□□□□□ -1.04
MBD4-209ENST00000511009 FNBP4Q8N3X1 1017 aaPredicted RBP8.53□□□□□ -1.04
MBD4-209ENST00000511009 SERPINA10Q9UK55 444 aa8.53□□□□□ -1.04
MBD4-209ENST00000511009 ZNF330Q9Y3S2 320 aaPredicted RBP8.53□□□□□ -1.04
MBD4-209ENST00000511009 AP1G2O75843 785 aa8.52□□□□□ -1.05
MBD4-209ENST00000511009 NDUFV2P19404 249 aa8.52□□□□□ -1.05
MBD4-209ENST00000511009 FBXO31Q5XUX0 539 aaPredicted RBP8.52□□□□□ -1.05
MBD4-209ENST00000511009 PDIA4P13667 645 aaKnown RBP8.51□□□□□ -1.05
MBD4-209ENST00000511009 GJA5P36382 358 aa8.51□□□□□ -1.05
MBD4-209ENST00000511009 SLC19A1P41440 591 aa8.51□□□□□ -1.05
MBD4-209ENST00000511009 GUCA2AQ02747 115 aa8.51□□□□□ -1.05
MBD4-209ENST00000511009 SPRYD7Q5W111 196 aa8.51□□□□□ -1.05
MBD4-209ENST00000511009 MMP16P51512 607 aa8.5□□□□□ -1.05
MBD4-209ENST00000511009 QPCTQ16769 361 aa8.5□□□□□ -1.05
MBD4-209ENST00000511009 GRIPAP1Q4V328 841 aa8.5□□□□□ -1.05
MBD4-209ENST00000511009 PCDHGC3Q9UN70 934 aa8.5□□□□□ -1.05
MBD4-209ENST00000511009 LILRB3O75022 631 aa8.49□□□□□ -1.05
MBD4-209ENST00000511009 MTMR14Q8NCE2 650 aa8.49□□□□□ -1.05
MBD4-209ENST00000511009 GDPD2Q9HCC8 539 aa8.49□□□□□ -1.05
MBD4-209ENST00000511009 ABL2P42684 1182 aa8.48□□□□□ -1.05
MBD4-209ENST00000511009 TRIM26Q12899 539 aaPredicted RBP8.48□□□□□ -1.05
MBD4-209ENST00000511009 PRPF38BQ5VTL8 546 aaKnown RBP8.48□□□□□ -1.05
MBD4-209ENST00000511009 ZBTB3Q9H5J0 574 aa8.48□□□□□ -1.05
MBD4-209ENST00000511009 PCDHB15Q9Y5E8 787 aa8.48□□□□□ -1.05
MBD4-209ENST00000511009 DXOO77932 396 aaKnown RBP8.47□□□□□ -1.05
MBD4-209ENST00000511009 Q3C1V9 767 aa8.47□□□□□ -1.05
MBD4-209ENST00000511009 RTL5Q5HYW3 569 aaPredicted RBP8.47□□□□□ -1.05
MBD4-209ENST00000511009 CABLES1Q8TDN4 633 aa8.47□□□□□ -1.05
MBD4-209ENST00000511009 FCF1Q9Y324 198 aaKnown RBP8.47□□□□□ -1.05
MBD4-209ENST00000511009 NRG2O14511 850 aaPredicted RBP8.46□□□□□ -1.06
MBD4-209ENST00000511009 SOCS7O14512 581 aa8.46□□□□□ -1.06
MBD4-209ENST00000511009 GFRA3O60609 400 aa8.46□□□□□ -1.06
MBD4-209ENST00000511009 USP17L8P0C7I0 530 aa8.46□□□□□ -1.06
MBD4-209ENST00000511009 FDX1P10109 184 aa8.46□□□□□ -1.06
MBD4-209ENST00000511009 ZNF598Q86UK7 904 aaKnown RBP8.46□□□□□ -1.06
MBD4-209ENST00000511009 SYMPKQ92797 1274 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms