RNA–Protein interactions for RNA: ENST00000510982.5

PDGFC-206, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-206ENST00000510982 NALCNQ8IZF0 1738 aa12.83□□□□□ -0.36
PDGFC-206ENST00000510982 SPATA31E1Q6ZUB1 1445 aa12.83□□□□□ -0.36
PDGFC-206ENST00000510982 NUTM2FA1L443 756 aa12.83□□□□□ -0.36
PDGFC-206ENST00000510982 NHSL1Q5SYE7 1610 aa12.82□□□□□ -0.36
PDGFC-206ENST00000510982 FOXO3O43524 673 aa12.82□□□□□ -0.36
PDGFC-206ENST00000510982 SETD1AO15047 1707 aaKnown RBP12.82□□□□□ -0.36
PDGFC-206ENST00000510982 UPF1Q92900 1129 aaKnown RBP eCLIP12.81□□□□□ -0.36
PDGFC-206ENST00000510982 LRPPRCP42704 1394 aaKnown RBP12.81□□□□□ -0.36
PDGFC-206ENST00000510982 PRAG1Q86YV5 1406 aa12.8□□□□□ -0.36
PDGFC-206ENST00000510982 RBM6P78332 1123 aaKnown RBP12.8□□□□□ -0.36
PDGFC-206ENST00000510982 XPCQ01831 940 aaPredicted RBP12.8□□□□□ -0.36
PDGFC-206ENST00000510982 C14orf93Q9H972 538 aaKnown RBP12.8□□□□□ -0.36
PDGFC-206ENST00000510982 NPHP3Q7Z494 1330 aa12.8□□□□□ -0.36
PDGFC-206ENST00000510982 ABCC11Q96J66 1382 aa12.8□□□□□ -0.36
PDGFC-206ENST00000510982 CFAP70Q5T0N1 1121 aa12.79□□□□□ -0.36
PDGFC-206ENST00000510982 SIRT1Q96EB6 747 aa12.78□□□□□ -0.36
PDGFC-206ENST00000510982 USP21Q9UK80 565 aa12.78□□□□□ -0.36
PDGFC-206ENST00000510982 PLEKHH1Q9ULM0 1364 aa12.78□□□□□ -0.36
PDGFC-206ENST00000510982 DHX57Q6P158 1386 aaKnown RBP12.76□□□□□ -0.37
PDGFC-206ENST00000510982 RAB3GAP2Q9H2M9 1393 aa12.76□□□□□ -0.37
PDGFC-206ENST00000510982 TECPR2O15040 1411 aa12.76□□□□□ -0.37
PDGFC-206ENST00000510982 PIK3C2GO75747 1445 aa12.76□□□□□ -0.37
PDGFC-206ENST00000510982 YTHDC2Q9H6S0 1430 aaKnown RBP12.76□□□□□ -0.37
PDGFC-206ENST00000510982 SAFB2Q14151 953 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDGFC-206ENST00000510982 FNBP4Q8N3X1 1017 aaPredicted RBP12.75□□□□□ -0.37
PDGFC-206ENST00000510982 TRPC5Q9UL62 973 aaPredicted RBP12.75□□□□□ -0.37
PDGFC-206ENST00000510982 KDM2AQ9Y2K7 1162 aa12.75□□□□□ -0.37
PDGFC-206ENST00000510982 CDK12Q9NYV4 1490 aaPredicted RBP12.74□□□□□ -0.37
PDGFC-206ENST00000510982 KRT28Q7Z3Y7 464 aa12.74□□□□□ -0.37
PDGFC-206ENST00000510982 POGKQ9P215 609 aa12.74□□□□□ -0.37
PDGFC-206ENST00000510982 LAMC1P11047 1609 aa12.73□□□□□ -0.37
PDGFC-206ENST00000510982 CDC42BPGQ6DT37 1551 aa12.73□□□□□ -0.37
PDGFC-206ENST00000510982 PRAM1Q96QH2 718 aa12.73□□□□□ -0.37
PDGFC-206ENST00000510982 IFT172Q9UG01 1749 aa12.72□□□□□ -0.37
PDGFC-206ENST00000510982 PSME1Q06323 249 aa12.72□□□□□ -0.37
PDGFC-206ENST00000510982 DCAF11Q8TEB1 546 aa12.72□□□□□ -0.37
PDGFC-206ENST00000510982 PHF8Q9UPP1 1060 aa12.72□□□□□ -0.37
PDGFC-206ENST00000510982 PXDNQ92626 1479 aa12.71□□□□□ -0.38
PDGFC-206ENST00000510982 SPATA31A3Q5VYP0 1347 aa12.7□□□□□ -0.38
PDGFC-206ENST00000510982 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
PDGFC-206ENST00000510982 HRCP23327 699 aa12.7□□□□□ -0.38
PDGFC-206ENST00000510982 TRAK1Q9UPV9 953 aa12.7□□□□□ -0.38
PDGFC-206ENST00000510982 RGS12O14924 1447 aa12.7□□□□□ -0.38
PDGFC-206ENST00000510982 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
PDGFC-206ENST00000510982 LMOD2Q6P5Q4 547 aa12.69□□□□□ -0.38
PDGFC-206ENST00000510982 NRXN1Q9ULB1 1477 aa12.69□□□□□ -0.38
PDGFC-206ENST00000510982 MYOM2P54296 1465 aa12.68□□□□□ -0.38
PDGFC-206ENST00000510982 PMFBP1Q8TBY8 1022 aa12.68□□□□□ -0.38
PDGFC-206ENST00000510982 GJD4Q96KN9 370 aaPredicted RBP12.68□□□□□ -0.38
PDGFC-206ENST00000510982 KNDC1Q76NI1 1749 aa12.68□□□□□ -0.38
PDGFC-206ENST00000510982 CABLES1Q8TDN4 633 aa12.67□□□□□ -0.38
PDGFC-206ENST00000510982 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
PDGFC-206ENST00000510982 HIRIP3Q9BW71 556 aaPredicted RBP12.67□□□□□ -0.38
PDGFC-206ENST00000510982 COL22A1Q8NFW1 1626 aaPredicted RBP12.66□□□□□ -0.38
PDGFC-206ENST00000510982 BCL9LQ86UU0 1499 aa12.66□□□□□ -0.38
PDGFC-206ENST00000510982 ATRNO75882 1429 aa12.66□□□□□ -0.38
PDGFC-206ENST00000510982 UNC5CLQ8IV45 518 aa12.66□□□□□ -0.38
PDGFC-206ENST00000510982 FMN2Q9NZ56 1722 aa12.65□□□□□ -0.38
PDGFC-206ENST00000510982 MINK1Q8N4C8 1332 aaPredicted RBP12.65□□□□□ -0.38
PDGFC-206ENST00000510982 ATAD2Q6PL18 1390 aa12.65□□□□□ -0.38
PDGFC-206ENST00000510982 RGPD8O14715 1765 aaPredicted RBP12.64□□□□□ -0.39
PDGFC-206ENST00000510982 WASLO00401 505 aaPredicted RBP12.63□□□□□ -0.39
PDGFC-206ENST00000510982 SBNO1A3KN83 1393 aa12.63□□□□□ -0.39
PDGFC-206ENST00000510982 KIF1AQ12756 1690 aa12.63□□□□□ -0.39
PDGFC-206ENST00000510982 DLC1Q96QB1 1528 aa12.62□□□□□ -0.39
PDGFC-206ENST00000510982 TNS3Q68CZ2 1445 aa12.62□□□□□ -0.39
PDGFC-206ENST00000510982 ARHGEF10O15013 1369 aa12.61□□□□□ -0.39
PDGFC-206ENST00000510982 GPRASP1Q5JY77 1395 aa12.61□□□□□ -0.39
PDGFC-206ENST00000510982 NGDNQ8NEJ9 315 aaKnown RBP12.61□□□□□ -0.39
PDGFC-206ENST00000510982 CCDC9Q9Y3X0 531 aaKnown RBP12.61□□□□□ -0.39
PDGFC-206ENST00000510982 ANKARQ7Z5J8 1434 aa12.61□□□□□ -0.39
PDGFC-206ENST00000510982 ADGRB1O14514 1584 aa12.6□□□□□ -0.39
PDGFC-206ENST00000510982 FAM83GA6ND36 823 aa12.6□□□□□ -0.39
PDGFC-206ENST00000510982 PAK3O75914 559 aaPredicted RBP12.6□□□□□ -0.39
PDGFC-206ENST00000510982 CCDC125Q86Z20 511 aa12.6□□□□□ -0.39
PDGFC-206ENST00000510982 PRR36Q9H6K5 1346 aa12.6□□□□□ -0.39
PDGFC-206ENST00000510982 MARF1Q9Y4F3 1742 aaKnown RBP12.59□□□□□ -0.39
PDGFC-206ENST00000510982 EIF3AQ14152 1382 aaKnown RBP12.59□□□□□ -0.39
PDGFC-206ENST00000510982 SLIT2O94813 1529 aa12.59□□□□□ -0.39
PDGFC-206ENST00000510982 VPS72Q15906 364 aa12.59□□□□□ -0.39
PDGFC-206ENST00000510982 SEPT12Q8IYM1 358 aa12.58□□□□□ -0.4
PDGFC-206ENST00000510982 NUDT16Q96DE0 195 aaKnown RBP12.58□□□□□ -0.4
PDGFC-206ENST00000510982 RALGAPBQ86X10 1494 aa12.58□□□□□ -0.4
PDGFC-206ENST00000510982 CDK19Q9BWU1 502 aa12.57□□□□□ -0.4
PDGFC-206ENST00000510982 ONECUT3O60422 494 aaPredicted RBP12.56□□□□□ -0.4
PDGFC-206ENST00000510982 BTG4Q9NY30 223 aa12.56□□□□□ -0.4
PDGFC-206ENST00000510982 ZRANB1Q9UGI0 708 aa12.56□□□□□ -0.4
PDGFC-206ENST00000510982 USP32Q8NFA0 1604 aa12.55□□□□□ -0.4
PDGFC-206ENST00000510982 A0A0G2JS52 829 aa12.55□□□□□ -0.4
PDGFC-206ENST00000510982 MYT1Q01538 1121 aa12.55□□□□□ -0.4
PDGFC-206ENST00000510982 NBPF1Q3BBV0 1214 aa12.55□□□□□ -0.4
PDGFC-206ENST00000510982 SF3B2Q13435 895 aaKnown RBP12.54□□□□□ -0.4
PDGFC-206ENST00000510982 KRT27Q7Z3Y8 459 aa12.54□□□□□ -0.4
PDGFC-206ENST00000510982 ADGRB2O60241 1585 aa12.54□□□□□ -0.4
PDGFC-206ENST00000510982 TULP4Q9NRJ4 1543 aa12.53□□□□□ -0.4
PDGFC-206ENST00000510982 GLI3P10071 1580 aa12.53□□□□□ -0.4
PDGFC-206ENST00000510982 PRDM11Q9NQV5 511 aa12.53□□□□□ -0.4
PDGFC-206ENST00000510982 CCDC61Q9Y6R9 512 aa12.53□□□□□ -0.4
PDGFC-206ENST00000510982 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.53□□□□□ -0.4
PDGFC-206ENST00000510982 FAM98CQ17RN3 349 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms