RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 LAS1LQ9Y4W2 734 aaKnown RBP16.47■□□□□ 0.23
LIN54-210ENST00000510877 RIMS1Q86UR5 1692 aaKnown RBP16.46■□□□□ 0.23
LIN54-210ENST00000510877 CGNL1Q0VF96 1302 aa16.46■□□□□ 0.23
LIN54-210ENST00000510877 ARHGEF40Q8TER5 1519 aa16.46■□□□□ 0.23
LIN54-210ENST00000510877 DDX10Q13206 875 aaKnown RBP16.46■□□□□ 0.22
LIN54-210ENST00000510877 C14orf93Q9H972 538 aaKnown RBP16.45■□□□□ 0.22
LIN54-210ENST00000510877 BTG4Q9NY30 223 aa16.44■□□□□ 0.22
LIN54-210ENST00000510877 NEUROD2Q15784 382 aa16.44■□□□□ 0.22
LIN54-210ENST00000510877 SETD1BQ9UPS6 1966 aaKnown RBP16.44■□□□□ 0.22
LIN54-210ENST00000510877 GLIPR1L2Q4G1C9 344 aa16.44■□□□□ 0.22
LIN54-210ENST00000510877 SHANK2Q9UPX8 1470 aa16.43■□□□□ 0.22
LIN54-210ENST00000510877 TTC5Q8N0Z6 440 aa16.43■□□□□ 0.22
LIN54-210ENST00000510877 JCADQ9P266 1359 aa16.43■□□□□ 0.22
LIN54-210ENST00000510877 PZPP20742 1482 aa16.43■□□□□ 0.22
LIN54-210ENST00000510877 SALL2Q9Y467 1007 aaPredicted RBP16.43■□□□□ 0.22
LIN54-210ENST00000510877 NAIPQ13075 1403 aa16.42■□□□□ 0.22
LIN54-210ENST00000510877 TEFQ10587 303 aa16.42■□□□□ 0.22
LIN54-210ENST00000510877 NBPF1Q3BBV0 1214 aa16.42■□□□□ 0.22
LIN54-210ENST00000510877 MBD5Q9P267 1494 aa16.42■□□□□ 0.22
LIN54-210ENST00000510877 EFCAB6Q5THR3 1501 aa16.41■□□□□ 0.22
LIN54-210ENST00000510877 RBM6P78332 1123 aaKnown RBP16.41■□□□□ 0.22
LIN54-210ENST00000510877 DDB1Q16531 1140 aa16.41■□□□□ 0.22
LIN54-210ENST00000510877 GGNBP2Q9H3C7 697 aa16.41■□□□□ 0.22
LIN54-210ENST00000510877 PLEKHG1Q9ULL1 1385 aa16.41■□□□□ 0.22
LIN54-210ENST00000510877 CFAP65Q6ZU64 1925 aaKnown RBP16.4■□□□□ 0.22
LIN54-210ENST00000510877 AFF2P51816 1311 aa16.4■□□□□ 0.22
LIN54-210ENST00000510877 ARHGEF12Q9NZN5 1544 aa16.4■□□□□ 0.22
LIN54-210ENST00000510877 U2AF1L5P0DN76 240 aaPredicted RBP16.4■□□□□ 0.22
LIN54-210ENST00000510877 U2AF1Q01081 240 aaKnown RBP eCLIP16.4■□□□□ 0.22
LIN54-210ENST00000510877 FAM98CQ17RN3 349 aaKnown RBP16.4■□□□□ 0.22
LIN54-210ENST00000510877 SMG6Q86US8 1419 aaKnown RBP16.39■□□□□ 0.22
LIN54-210ENST00000510877 ERVK-7P63135 1459 aa16.39■□□□□ 0.21
LIN54-210ENST00000510877 KTN1Q86UP2 1357 aaKnown RBP16.39■□□□□ 0.21
LIN54-210ENST00000510877 ATAD2Q6PL18 1390 aa16.39■□□□□ 0.21
LIN54-210ENST00000510877 RBM42Q9BTD8 480 aaKnown RBP16.38■□□□□ 0.21
LIN54-210ENST00000510877 MADDQ8WXG6 1647 aa16.38■□□□□ 0.21
LIN54-210ENST00000510877 PTPRTO14522 1441 aa16.37■□□□□ 0.21
LIN54-210ENST00000510877 CAMSAP1Q5T5Y3 1602 aa16.37■□□□□ 0.21
LIN54-210ENST00000510877 G3V3G9 751 aa16.37■□□□□ 0.21
LIN54-210ENST00000510877 HSPA5P11021 654 aaKnown RBP16.37■□□□□ 0.21
LIN54-210ENST00000510877 DCAF8Q5TAQ9 597 aa16.37■□□□□ 0.21
LIN54-210ENST00000510877 ACEP12821 1306 aa16.36■□□□□ 0.21
LIN54-210ENST00000510877 PREX2Q70Z35 1606 aa16.36■□□□□ 0.21
LIN54-210ENST00000510877 AGLP35573 1532 aa16.35■□□□□ 0.21
LIN54-210ENST00000510877 BRINP3Q76B58 766 aa16.35■□□□□ 0.21
LIN54-210ENST00000510877 SPATA31A6Q5VVP1 1343 aa16.35■□□□□ 0.21
LIN54-210ENST00000510877 ARHGEF10O15013 1369 aa16.35■□□□□ 0.21
LIN54-210ENST00000510877 APBA3O96018 575 aa16.35■□□□□ 0.21
LIN54-210ENST00000510877 SLC12A5Q9H2X9 1139 aa16.35■□□□□ 0.21
LIN54-210ENST00000510877 SPG7Q9UQ90 795 aa16.34■□□□□ 0.21
LIN54-210ENST00000510877 WASHC2AQ641Q2 1341 aa16.34■□□□□ 0.21
LIN54-210ENST00000510877 POLD1P28340 1107 aa16.34■□□□□ 0.21
LIN54-210ENST00000510877 STK32BQ9NY57 414 aa16.33■□□□□ 0.2
LIN54-210ENST00000510877 RPRD2Q5VT52 1461 aaKnown RBP16.33■□□□□ 0.2
LIN54-210ENST00000510877 PIK3R4Q99570 1358 aa16.32■□□□□ 0.2
LIN54-210ENST00000510877 MAP3K4Q9Y6R4 1608 aa16.32■□□□□ 0.2
LIN54-210ENST00000510877 PLEKHO1Q53GL0 409 aaPredicted RBP16.32■□□□□ 0.2
LIN54-210ENST00000510877 CHMP4AQ9BY43 222 aa16.3■□□□□ 0.2
LIN54-210ENST00000510877 KRT27Q7Z3Y8 459 aa16.29■□□□□ 0.2
LIN54-210ENST00000510877 ZNF316A6NFI3 1004 aaPredicted RBP16.29■□□□□ 0.2
LIN54-210ENST00000510877 FAM9BQ8IZU0 186 aa16.28■□□□□ 0.2
LIN54-210ENST00000510877 PANK3Q9H999 370 aa16.28■□□□□ 0.2
LIN54-210ENST00000510877 C11orf95C9JLR9 678 aaPredicted RBP16.28■□□□□ 0.2
LIN54-210ENST00000510877 ARHGEF5Q12774 1597 aa16.28■□□□□ 0.2
LIN54-210ENST00000510877 DIP2CQ9Y2E4 1556 aa16.27■□□□□ 0.2
LIN54-210ENST00000510877 CDCA7Q9BWT1 371 aaPredicted RBP16.27■□□□□ 0.2
LIN54-210ENST00000510877 MRS2Q9HD23 443 aa16.27■□□□□ 0.2
LIN54-210ENST00000510877 USP47Q96K76 1375 aa16.27■□□□□ 0.19
LIN54-210ENST00000510877 TCOF1Q13428 1488 aaKnown RBP16.27■□□□□ 0.19
LIN54-210ENST00000510877 HSP90AB1P08238 724 aaKnown RBP16.26■□□□□ 0.19
LIN54-210ENST00000510877 GCP02774 474 aa16.26■□□□□ 0.19
LIN54-210ENST00000510877 CABP4P57796 275 aa16.26■□□□□ 0.19
LIN54-210ENST00000510877 UNC5CLQ8IV45 518 aa16.26■□□□□ 0.19
LIN54-210ENST00000510877 ACSBG1Q96GR2 724 aa16.25■□□□□ 0.19
LIN54-210ENST00000510877 SEPT12Q8IYM1 358 aa16.25■□□□□ 0.19
LIN54-210ENST00000510877 TCP11L2Q8N4U5 519 aa16.24■□□□□ 0.19
LIN54-210ENST00000510877 AK7Q96M32 723 aa16.24■□□□□ 0.19
LIN54-210ENST00000510877 ABCC3O15438 1527 aa16.24■□□□□ 0.19
LIN54-210ENST00000510877 MPRIPQ6WCQ1 1025 aa16.24■□□□□ 0.19
LIN54-210ENST00000510877 TFCP2L1Q9NZI6 479 aa16.24■□□□□ 0.19
LIN54-210ENST00000510877 ARHGAP31Q2M1Z3 1444 aa16.24■□□□□ 0.19
LIN54-210ENST00000510877 FAM196AQ6ZSG2 479 aa16.23■□□□□ 0.19
LIN54-210ENST00000510877 DIAPH1O60610 1272 aaKnown RBP16.22■□□□□ 0.19
LIN54-210ENST00000510877 TMOD3Q9NYL9 352 aa16.22■□□□□ 0.19
LIN54-210ENST00000510877 ZNF530Q6P9A1 599 aaPredicted RBP16.22■□□□□ 0.19
LIN54-210ENST00000510877 ZMYM4Q5VZL5 1548 aa16.22■□□□□ 0.19
LIN54-210ENST00000510877 GOLGA2Q08379 1002 aa16.22■□□□□ 0.19
LIN54-210ENST00000510877 YTHDC2Q9H6S0 1430 aaKnown RBP16.22■□□□□ 0.19
LIN54-210ENST00000510877 NME9Q86XW9 330 aa16.21■□□□□ 0.19
LIN54-210ENST00000510877 ANKRD24Q8TF21 1146 aa16.21■□□□□ 0.19
LIN54-210ENST00000510877 NGEFQ8N5V2 710 aa16.21■□□□□ 0.19
LIN54-210ENST00000510877 RRS1Q15050 365 aaKnown RBP16.2■□□□□ 0.18
LIN54-210ENST00000510877 METP08581 1390 aa16.2■□□□□ 0.18
LIN54-210ENST00000510877 KAT6BQ8WYB5 2073 aa16.19■□□□□ 0.18
LIN54-210ENST00000510877 EIF5BO60841 1220 aaKnown RBP16.19■□□□□ 0.18
LIN54-210ENST00000510877 LMOD3Q0VAK6 560 aa16.19■□□□□ 0.18
LIN54-210ENST00000510877 TTC21AQ8NDW8 1320 aa16.19■□□□□ 0.18
LIN54-210ENST00000510877 TRPM2O94759 1503 aa16.19■□□□□ 0.18
LIN54-210ENST00000510877 IL2RBP14784 551 aa16.18■□□□□ 0.18
LIN54-210ENST00000510877 MTHFSP49914 203 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms