RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 DDX54Q8TDD1 881 aaKnown RBP8.85□□□□□ -0.99
KDM3B-207ENST00000510866 FAM177BA6PVY3 158 aa8.84□□□□□ -0.99
KDM3B-207ENST00000510866 KIF6Q6ZMV9 814 aa8.84□□□□□ -0.99
KDM3B-207ENST00000510866 CNTLNQ9NXG0 1405 aa8.84□□□□□ -0.99
KDM3B-207ENST00000510866 CRBNQ96SW2 442 aa8.84□□□□□ -0.99
KDM3B-207ENST00000510866 SLC12A5Q9H2X9 1139 aa8.84□□□□□ -0.99
KDM3B-207ENST00000510866 DIAPH3Q9NSV4 1193 aa8.84□□□□□ -0.99
KDM3B-207ENST00000510866 DDX19BQ9UMR2 479 aa8.84□□□□□ -0.99
KDM3B-207ENST00000510866 CTDP1Q9Y5B0 961 aaPredicted RBP8.84□□□□□ -0.99
KDM3B-207ENST00000510866 PEG3Q9GZU2 1588 aa8.84□□□□□ -0.99
KDM3B-207ENST00000510866 CEBPAP49715 358 aaPredicted RBP8.84□□□□□ -1
KDM3B-207ENST00000510866 DZIP1LQ8IYY4 767 aaKnown RBP8.84□□□□□ -1
KDM3B-207ENST00000510866 PRDM11Q9NQV5 511 aa8.84□□□□□ -1
KDM3B-207ENST00000510866 DENND4BO75064 1496 aaPredicted RBP8.83□□□□□ -1
KDM3B-207ENST00000510866 AKNAQ7Z591 1439 aa8.83□□□□□ -1
KDM3B-207ENST00000510866 KIF16BQ96L93 1317 aa8.83□□□□□ -1
KDM3B-207ENST00000510866 RRP1P56182 461 aaKnown RBP8.83□□□□□ -1
KDM3B-207ENST00000510866 FOXD4L1Q9NU39 408 aa8.83□□□□□ -1
KDM3B-207ENST00000510866 GBP4Q96PP9 640 aa8.83□□□□□ -1
KDM3B-207ENST00000510866 ANKRD30BQ9BXX2 1392 aa8.83□□□□□ -1
KDM3B-207ENST00000510866 APPP05067 770 aa8.83□□□□□ -1
KDM3B-207ENST00000510866 CABP4P57796 275 aa8.83□□□□□ -1
KDM3B-207ENST00000510866 PPP1R1BQ9UD71 204 aaPredicted RBP8.83□□□□□ -1
KDM3B-207ENST00000510866 ZBED9Q6R2W3 1325 aa8.83□□□□□ -1
KDM3B-207ENST00000510866 PRKAR2BP31323 418 aa8.83□□□□□ -1
KDM3B-207ENST00000510866 SLKQ9H2G2 1235 aaPredicted RBP8.83□□□□□ -1
KDM3B-207ENST00000510866 FANCAO15360 1455 aa8.82□□□□□ -1
KDM3B-207ENST00000510866 PTPN23Q9H3S7 1636 aa8.82□□□□□ -1
KDM3B-207ENST00000510866 WASHC2AQ641Q2 1341 aa8.82□□□□□ -1
KDM3B-207ENST00000510866 SPG7Q9UQ90 795 aa8.82□□□□□ -1
KDM3B-207ENST00000510866 ST18O60284 1047 aa8.82□□□□□ -1
KDM3B-207ENST00000510866 AKAP17AQ02040 695 aaKnown RBP8.82□□□□□ -1
KDM3B-207ENST00000510866 CENPQQ7L2Z9 268 aaPredicted RBP8.82□□□□□ -1
KDM3B-207ENST00000510866 SYNE3Q6ZMZ3 975 aa8.81□□□□□ -1
KDM3B-207ENST00000510866 PPP2R1AP30153 589 aa8.81□□□□□ -1
KDM3B-207ENST00000510866 FBXO31Q5XUX0 539 aaPredicted RBP8.81□□□□□ -1
KDM3B-207ENST00000510866 EXOC6Q8TAG9 804 aa8.81□□□□□ -1
KDM3B-207ENST00000510866 CCDC30Q5VVM6 783 aa8.81□□□□□ -1
KDM3B-207ENST00000510866 SULT6B1Q6IMI4 303 aa8.81□□□□□ -1
KDM3B-207ENST00000510866 CCDC34Q96HJ3 373 aa8.81□□□□□ -1
KDM3B-207ENST00000510866 BIVM-ERCC5R4GMW8 1640 aa8.81□□□□□ -1
KDM3B-207ENST00000510866 RUFY2Q8WXA3 655 aa8.81□□□□□ -1
KDM3B-207ENST00000510866 NEUROD6Q96NK8 337 aa8.81□□□□□ -1
KDM3B-207ENST00000510866 KIF3AQ9Y496 699 aa8.8□□□□□ -1
KDM3B-207ENST00000510866 PTMSP20962 102 aa8.8□□□□□ -1
KDM3B-207ENST00000510866 NUDT16Q96DE0 195 aaKnown RBP8.8□□□□□ -1
KDM3B-207ENST00000510866 ZC3H6P61129 1189 aaKnown RBP8.8□□□□□ -1
KDM3B-207ENST00000510866 ZNF530Q6P9A1 599 aaPredicted RBP8.8□□□□□ -1
KDM3B-207ENST00000510866 ADAMTS8Q9UP79 889 aa8.8□□□□□ -1
KDM3B-207ENST00000510866 UBTFL1P0CB47 393 aaPredicted RBP8.8□□□□□ -1
KDM3B-207ENST00000510866 WAPLQ7Z5K2 1190 aa8.8□□□□□ -1
KDM3B-207ENST00000510866 ARID3AQ99856 593 aa8.79□□□□□ -1
KDM3B-207ENST00000510866 ATAD2Q6PL18 1390 aa8.79□□□□□ -1
KDM3B-207ENST00000510866 H3BQV1 296 aa8.79□□□□□ -1
KDM3B-207ENST00000510866 RRS1Q15050 365 aaKnown RBP8.79□□□□□ -1
KDM3B-207ENST00000510866 IFFO2Q5TF58 517 aa8.79□□□□□ -1
KDM3B-207ENST00000510866 HSP90AB4PQ58FF6 505 aa8.79□□□□□ -1
KDM3B-207ENST00000510866 CWC22Q9HCG8 908 aaKnown RBP8.79□□□□□ -1
KDM3B-207ENST00000510866 CSPP1Q1MSJ5 1256 aa8.79□□□□□ -1
KDM3B-207ENST00000510866 CCDC27Q2M243 656 aa8.79□□□□□ -1
KDM3B-207ENST00000510866 NBPF8Q3BBV2 869 aa8.79□□□□□ -1
KDM3B-207ENST00000510866 TCP11L2Q8N4U5 519 aa8.79□□□□□ -1
KDM3B-207ENST00000510866 FAM184AQ8NB25 1140 aa8.79□□□□□ -1
KDM3B-207ENST00000510866 FYB1O15117 783 aa8.78□□□□□ -1
KDM3B-207ENST00000510866 DHX16O60231 1041 aaKnown RBP8.78□□□□□ -1
KDM3B-207ENST00000510866 TNNT3P45378 269 aaPredicted RBP8.78□□□□□ -1
KDM3B-207ENST00000510866 FOXD4L5Q5VV16 416 aaPredicted RBP8.78□□□□□ -1
KDM3B-207ENST00000510866 FOXD4L4Q8WXT5 416 aaPredicted RBP8.78□□□□□ -1
KDM3B-207ENST00000510866 FAM135AQ9P2D6 1515 aa8.78□□□□□ -1
KDM3B-207ENST00000510866 KIAA2012Q0VF49 1180 aa8.78□□□□□ -1
KDM3B-207ENST00000510866 BRD4O60885 1362 aaPredicted RBP8.78□□□□□ -1
KDM3B-207ENST00000510866 TPM4P67936 248 aa8.78□□□□□ -1
KDM3B-207ENST00000510866 ANO2Q9NQ90 1003 aa8.78□□□□□ -1
KDM3B-207ENST00000510866 ABCC5O15440 1437 aa8.78□□□□□ -1
KDM3B-207ENST00000510866 SF3A1Q15459 793 aaKnown RBP8.78□□□□□ -1
KDM3B-207ENST00000510866 SYAP1Q96A49 352 aaPredicted RBP8.78□□□□□ -1
KDM3B-207ENST00000510866 TCEAL9Q9UHQ7 104 aa8.78□□□□□ -1
KDM3B-207ENST00000510866 CREBRFQ8IUR6 639 aa8.77□□□□□ -1.01
KDM3B-207ENST00000510866 AMOTL2Q9Y2J4 779 aa8.77□□□□□ -1.01
KDM3B-207ENST00000510866 DMRT2Q9Y5R5 561 aa8.77□□□□□ -1.01
KDM3B-207ENST00000510866 TEX14Q8IWB6 1497 aa8.77□□□□□ -1.01
KDM3B-207ENST00000510866 PPP6R1Q9UPN7 881 aa8.77□□□□□ -1.01
KDM3B-207ENST00000510866 ADAMTS2O95450 1211 aa8.77□□□□□ -1.01
KDM3B-207ENST00000510866 SAMD1Q6SPF0 538 aaPredicted RBP8.77□□□□□ -1.01
KDM3B-207ENST00000510866 ASXL2Q76L83 1435 aa8.77□□□□□ -1.01
KDM3B-207ENST00000510866 CHAF1AQ13111 956 aaPredicted RBP8.77□□□□□ -1.01
KDM3B-207ENST00000510866 ERC2O15083 957 aa8.76□□□□□ -1.01
KDM3B-207ENST00000510866 TRDNQ13061 729 aa8.76□□□□□ -1.01
KDM3B-207ENST00000510866 CHMP4CQ96CF2 233 aa8.76□□□□□ -1.01
KDM3B-207ENST00000510866 RBM19Q9Y4C8 960 aaKnown RBP8.76□□□□□ -1.01
KDM3B-207ENST00000510866 KCNH5Q8NCM2 988 aa8.76□□□□□ -1.01
KDM3B-207ENST00000510866 PNISRQ8TF01 805 aaKnown RBP8.76□□□□□ -1.01
KDM3B-207ENST00000510866 GZF1Q9H116 711 aaPredicted RBP8.76□□□□□ -1.01
KDM3B-207ENST00000510866 RAPGEF6Q8TEU7 1601 aa8.76□□□□□ -1.01
KDM3B-207ENST00000510866 ZKSCAN1P17029 563 aaPredicted RBP8.76□□□□□ -1.01
KDM3B-207ENST00000510866 WASHC4Q2M389 1173 aa8.76□□□□□ -1.01
KDM3B-207ENST00000510866 NFXL1Q6ZNB6 911 aa8.76□□□□□ -1.01
KDM3B-207ENST00000510866 ERICH2A1L162 156 aa8.76□□□□□ -1.01
KDM3B-207ENST00000510866 CCDC61Q9Y6R9 512 aa8.76□□□□□ -1.01
KDM3B-207ENST00000510866 TWISTNBQ3B726 338 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms