RNA–Protein interactions for RNA: ENST00000510721.1

PAPD4-213, Transcript of Poly(A) RNA polymerase GLD2, human

TSL 2

Gene PAPD4, Length 522 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPD4-213	ENST00000510721	RSPH6A	Q9H0K4	717 aa		4.82	□□□□□ -1.64
PAPD4-213	ENST00000510721	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	4.82	□□□□□ -1.64
PAPD4-213	ENST00000510721	PRKCSH	P14314	528 aa	Predicted RBP	4.81	□□□□□ -1.64
PAPD4-213	ENST00000510721	GJA5	P36382	358 aa		4.81	□□□□□ -1.64
PAPD4-213	ENST00000510721	GUCA2A	Q02747	115 aa		4.81	□□□□□ -1.64
PAPD4-213	ENST00000510721	HLA-C	Q95604	372 aa		4.81	□□□□□ -1.64
PAPD4-213	ENST00000510721	SLC6A16	Q9GZN6	736 aa		4.81	□□□□□ -1.64
PAPD4-213	ENST00000510721	NRG2	O14511	850 aa	Predicted RBP	4.8	□□□□□ -1.64
PAPD4-213	ENST00000510721	NDUFV2	P19404	249 aa		4.8	□□□□□ -1.64
PAPD4-213	ENST00000510721	LCE2A	Q5TA79	106 aa	Predicted RBP	4.8	□□□□□ -1.64
PAPD4-213	ENST00000510721	RNF19B	Q6ZMZ0	732 aa		4.8	□□□□□ -1.64
PAPD4-213	ENST00000510721	USB1	Q9BQ65	265 aa	Known RBP	4.8	□□□□□ -1.64
PAPD4-213	ENST00000510721	FAM117A	Q9C073	453 aa		4.8	□□□□□ -1.64
PAPD4-213	ENST00000510721	SPDYE5	A6NIY4	337 aa		4.79	□□□□□ -1.64
PAPD4-213	ENST00000510721	SPTLC1	O15269	473 aa		4.79	□□□□□ -1.64
PAPD4-213	ENST00000510721	S1PR4	O95977	384 aa		4.79	□□□□□ -1.64
PAPD4-213	ENST00000510721	BRPF1	P55201	1214 aa	Predicted RBP	4.79	□□□□□ -1.64
PAPD4-213	ENST00000510721	MSS51	Q4VC12	460 aa		4.79	□□□□□ -1.64
PAPD4-213	ENST00000510721	MYSM1	Q5VVJ2	828 aa		4.79	□□□□□ -1.64
PAPD4-213	ENST00000510721	RSBN1L	Q6PCB5	846 aa	Predicted RBP	4.79	□□□□□ -1.64
PAPD4-213	ENST00000510721	TREML4	Q6UXN2	200 aa		4.79	□□□□□ -1.64
PAPD4-213	ENST00000510721	RIC3	Q7Z5B4	369 aa		4.79	□□□□□ -1.64
PAPD4-213	ENST00000510721	FAM160A2	Q8N612	972 aa	Predicted RBP	4.79	□□□□□ -1.64
PAPD4-213	ENST00000510721	PCDHGC3	Q9UN70	934 aa		4.79	□□□□□ -1.64
PAPD4-213	ENST00000510721	RNF223	E7ERA6	249 aa		4.78	□□□□□ -1.64
PAPD4-213	ENST00000510721	C6orf229	H3BNL8	230 aa		4.78	□□□□□ -1.64
PAPD4-213	ENST00000510721	MTMR2	Q13614	643 aa		4.78	□□□□□ -1.64
PAPD4-213	ENST00000510721	TUSC1	Q2TAM9	212 aa		4.78	□□□□□ -1.64
PAPD4-213	ENST00000510721	RETREG3	Q86VR2	466 aa		4.78	□□□□□ -1.64
PAPD4-213	ENST00000510721	ANKLE1	Q8NAG6	615 aa		4.78	□□□□□ -1.64
PAPD4-213	ENST00000510721	SYMPK	Q92797	1274 aa	Known RBP	4.78	□□□□□ -1.64
PAPD4-213	ENST00000510721	PPEF1	O14829	653 aa	Predicted RBP	4.77	□□□□□ -1.65
PAPD4-213	ENST00000510721	CLK2	P49760	499 aa	Known RBP	4.77	□□□□□ -1.65
PAPD4-213	ENST00000510721	SKIV2L	Q15477	1246 aa	Known RBP	4.77	□□□□□ -1.65
PAPD4-213	ENST00000510721	PRPF38B	Q5VTL8	546 aa	Known RBP	4.77	□□□□□ -1.65
PAPD4-213	ENST00000510721		V9GY48	417 aa	Predicted RBP	4.77	□□□□□ -1.65
PAPD4-213	ENST00000510721	PLEKHG3	A1L390	1219 aa		4.76	□□□□□ -1.65
PAPD4-213	ENST00000510721	MMP16	P51512	607 aa		4.76	□□□□□ -1.65
PAPD4-213	ENST00000510721	SH3D19	Q5HYK7	790 aa		4.76	□□□□□ -1.65
PAPD4-213	ENST00000510721	IL27	Q8NEV9	243 aa		4.76	□□□□□ -1.65
PAPD4-213	ENST00000510721	PRKD2	Q9BZL6	878 aa		4.76	□□□□□ -1.65
PAPD4-213	ENST00000510721	ZBTB3	Q9H5J0	574 aa		4.76	□□□□□ -1.65
PAPD4-213	ENST00000510721	POLR3E	Q9NVU0	708 aa		4.76	□□□□□ -1.65
PAPD4-213	ENST00000510721	LIMD1	Q9UGP4	676 aa		4.76	□□□□□ -1.65
PAPD4-213	ENST00000510721	PCDHB15	Q9Y5E8	787 aa		4.76	□□□□□ -1.65
PAPD4-213	ENST00000510721	NUTM2B	A6NNL0	878 aa	Predicted RBP	4.75	□□□□□ -1.65
PAPD4-213	ENST00000510721	NUTM2E	B1AL46	878 aa	Predicted RBP	4.75	□□□□□ -1.65
PAPD4-213	ENST00000510721	DXO	O77932	396 aa	Known RBP	4.75	□□□□□ -1.65
PAPD4-213	ENST00000510721	HRC	P23327	699 aa		4.75	□□□□□ -1.65
PAPD4-213	ENST00000510721	NUTM2D	Q5VT03	806 aa	Predicted RBP	4.75	□□□□□ -1.65
PAPD4-213	ENST00000510721	NUTM2A	Q8IVF1	878 aa	Predicted RBP	4.75	□□□□□ -1.65
PAPD4-213	ENST00000510721	GOPC	Q9HD26	462 aa		4.75	□□□□□ -1.65
PAPD4-213	ENST00000510721	PRDM9	Q9NQV7	894 aa		4.75	□□□□□ -1.65
PAPD4-213	ENST00000510721	FCF1	Q9Y324	198 aa	Known RBP	4.75	□□□□□ -1.65
PAPD4-213	ENST00000510721	LILRB3	O75022	631 aa		4.74	□□□□□ -1.65
PAPD4-213	ENST00000510721	JUND	P17535	347 aa		4.74	□□□□□ -1.65
PAPD4-213	ENST00000510721	CSPP1	Q1MSJ5	1256 aa		4.74	□□□□□ -1.65
PAPD4-213	ENST00000510721	DESI1	Q6ICB0	168 aa		4.74	□□□□□ -1.65
PAPD4-213	ENST00000510721	PRR7	Q8TB68	274 aa		4.74	□□□□□ -1.65
PAPD4-213	ENST00000510721	ATP1B4	Q9UN42	357 aa	Predicted RBP	4.74	□□□□□ -1.65
PAPD4-213	ENST00000510721	ZBTB24	O43167	697 aa	Predicted RBP	4.73	□□□□□ -1.65
PAPD4-213	ENST00000510721	SLC19A1	P41440	591 aa		4.73	□□□□□ -1.65
PAPD4-213	ENST00000510721	QPCT	Q16769	361 aa		4.73	□□□□□ -1.65
PAPD4-213	ENST00000510721	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	4.73	□□□□□ -1.65
PAPD4-213	ENST00000510721	RPIA	P49247	311 aa		4.72	□□□□□ -1.65
PAPD4-213	ENST00000510721	PLA2G2C	Q5R387	149 aa		4.72	□□□□□ -1.65
PAPD4-213	ENST00000510721	SPRYD7	Q5W111	196 aa		4.72	□□□□□ -1.65
PAPD4-213	ENST00000510721	LIAT1	Q6ZQX7	453 aa		4.72	□□□□□ -1.65
PAPD4-213	ENST00000510721	CCDC24	Q8N4L8	307 aa		4.72	□□□□□ -1.65
PAPD4-213	ENST00000510721	PROCA1	Q8NCQ7	364 aa	Predicted RBP	4.72	□□□□□ -1.65
PAPD4-213	ENST00000510721	CABLES1	Q8TDN4	633 aa		4.72	□□□□□ -1.65
PAPD4-213	ENST00000510721	PCMTD1	Q96MG8	357 aa	Predicted RBP	4.72	□□□□□ -1.65
PAPD4-213	ENST00000510721	NUDT12	Q9BQG2	462 aa		4.72	□□□□□ -1.65
PAPD4-213	ENST00000510721	KRTAP4-8	Q9BYQ9	185 aa		4.72	□□□□□ -1.65
PAPD4-213	ENST00000510721	CFAP99	D6REC4	459 aa		4.71	□□□□□ -1.66
PAPD4-213	ENST00000510721	CD2BP2	O95400	341 aa	Known RBP	4.71	□□□□□ -1.66
PAPD4-213	ENST00000510721	INSM1	Q01101	510 aa	Predicted RBP	4.71	□□□□□ -1.66
PAPD4-213	ENST00000510721	PTPRN	Q16849	979 aa		4.71	□□□□□ -1.66
PAPD4-213	ENST00000510721	RTL5	Q5HYW3	569 aa	Predicted RBP	4.71	□□□□□ -1.66
PAPD4-213	ENST00000510721	PPP2R2D	Q66LE6	453 aa		4.71	□□□□□ -1.66
PAPD4-213	ENST00000510721	LYPD8	Q6UX82	237 aa		4.71	□□□□□ -1.66
PAPD4-213	ENST00000510721	ZNF598	Q86UK7	904 aa	Known RBP	4.71	□□□□□ -1.66
PAPD4-213	ENST00000510721	HELB	Q8NG08	1087 aa	Predicted RBP	4.71	□□□□□ -1.66
PAPD4-213	ENST00000510721	EMID1	Q96A84	441 aa	Predicted RBP	4.71	□□□□□ -1.66
PAPD4-213	ENST00000510721	PDZRN3	Q9UPQ7	1066 aa		4.71	□□□□□ -1.66
PAPD4-213	ENST00000510721	CCNYL3	P0C7X3	344 aa		4.7	□□□□□ -1.66
PAPD4-213	ENST00000510721	TSC1	Q92574	1164 aa		4.7	□□□□□ -1.66
PAPD4-213	ENST00000510721	EVA1B	Q9NVM1	165 aa		4.7	□□□□□ -1.66
PAPD4-213	ENST00000510721	KCNH2	Q12809	1159 aa		4.68	□□□□□ -1.66
PAPD4-213	ENST00000510721	ZNF697	Q5TEC3	545 aa		4.68	□□□□□ -1.66
PAPD4-213	ENST00000510721	CTH	P32929	405 aa		4.67	□□□□□ -1.66
PAPD4-213	ENST00000510721	CTDSPL2	Q05D32	466 aa		4.67	□□□□□ -1.66
PAPD4-213	ENST00000510721	TRIM32	Q13049	653 aa		4.67	□□□□□ -1.66
PAPD4-213	ENST00000510721	TMEM259	Q4ZIN3	620 aa		4.67	□□□□□ -1.66
PAPD4-213	ENST00000510721	FBXO31	Q5XUX0	539 aa	Predicted RBP	4.67	□□□□□ -1.66
PAPD4-213	ENST00000510721	PTCRA	Q6ISU1	281 aa	Predicted RBP	4.67	□□□□□ -1.66
PAPD4-213	ENST00000510721	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.66	□□□□□ -1.66
PAPD4-213	ENST00000510721	PER1	O15534	1290 aa	Predicted RBP	4.66	□□□□□ -1.66
PAPD4-213	ENST00000510721	F12	P00748	615 aa	Predicted RBP	4.66	□□□□□ -1.66
PAPD4-213	ENST00000510721	RFC5	P40937	340 aa		4.66	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms