RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-208ENST00000510676 PTPN23Q9H3S7 1636 aa17.18■□□□□ 0.34
PTCD2-208ENST00000510676 BAG6P46379 1132 aa17.17■□□□□ 0.34
PTCD2-208ENST00000510676 METP08581 1390 aa17.16■□□□□ 0.34
PTCD2-208ENST00000510676 SEPT12Q8IYM1 358 aa17.16■□□□□ 0.34
PTCD2-208ENST00000510676 ORAI2Q96SN7 254 aa17.16■□□□□ 0.34
PTCD2-208ENST00000510676 DAPK1P53355 1430 aa17.15■□□□□ 0.34
PTCD2-208ENST00000510676 ANKRD30AQ9BXX3 1397 aa17.15■□□□□ 0.34
PTCD2-208ENST00000510676 R3HDM1Q15032 1099 aaKnown RBP17.14■□□□□ 0.33
PTCD2-208ENST00000510676 PXDNQ92626 1479 aa17.12■□□□□ 0.33
PTCD2-208ENST00000510676 CHGAP10645 457 aaKnown RBP17.12■□□□□ 0.33
PTCD2-208ENST00000510676 KRT27Q7Z3Y8 459 aa17.12■□□□□ 0.33
PTCD2-208ENST00000510676 DISP2A7MBM2 1401 aa17.12■□□□□ 0.33
PTCD2-208ENST00000510676 VPS72Q15906 364 aa17.09■□□□□ 0.33
PTCD2-208ENST00000510676 NPHP3Q7Z494 1330 aa17.09■□□□□ 0.33
PTCD2-208ENST00000510676 EN1Q05925 392 aaPredicted RBP17.07■□□□□ 0.32
PTCD2-208ENST00000510676 IQGAP3Q86VI3 1631 aa17.07■□□□□ 0.32
PTCD2-208ENST00000510676 PRAG1Q86YV5 1406 aa17.06■□□□□ 0.32
PTCD2-208ENST00000510676 ADGRL2O95490 1459 aa17.05■□□□□ 0.32
PTCD2-208ENST00000510676 KANK4Q5T7N3 995 aaPredicted RBP17.05■□□□□ 0.32
PTCD2-208ENST00000510676 SENP3-EIF4A1A0A087X0R7 540 aa17.04■□□□□ 0.32
PTCD2-208ENST00000510676 CHIC2Q9UKJ5 165 aa17.03■□□□□ 0.32
PTCD2-208ENST00000510676 RGPD1P0DJD0 1748 aa17.03■□□□□ 0.32
PTCD2-208ENST00000510676 ANKRD50Q9ULJ7 1429 aa17.03■□□□□ 0.32
PTCD2-208ENST00000510676 USP32Q8NFA0 1604 aa17.03■□□□□ 0.32
PTCD2-208ENST00000510676 NINLQ9Y2I6 1382 aa17.02■□□□□ 0.32
PTCD2-208ENST00000510676 E9PCH4 1651 aa17.02■□□□□ 0.32
PTCD2-208ENST00000510676 ZNF784Q8NCA9 323 aaPredicted RBP17.02■□□□□ 0.32
PTCD2-208ENST00000510676 ROBO2Q9HCK4 1378 aa17.02■□□□□ 0.31
PTCD2-208ENST00000510676 NWD2Q9ULI1 1742 aa16.99■□□□□ 0.31
PTCD2-208ENST00000510676 DCAF8L1A6NGE4 600 aa16.99■□□□□ 0.31
PTCD2-208ENST00000510676 FOXO3O43524 673 aa16.98■□□□□ 0.31
PTCD2-208ENST00000510676 C1QTNF8P60827 252 aa16.98■□□□□ 0.31
PTCD2-208ENST00000510676 CAMKK2Q96RR4 588 aa16.98■□□□□ 0.31
PTCD2-208ENST00000510676 LRPPRCP42704 1394 aaKnown RBP16.98■□□□□ 0.31
PTCD2-208ENST00000510676 PARD3Q8TEW0 1356 aa16.98■□□□□ 0.31
PTCD2-208ENST00000510676 TNS1Q9HBL0 1735 aaKnown RBP16.98■□□□□ 0.31
PTCD2-208ENST00000510676 SPATA31A3Q5VYP0 1347 aa16.97■□□□□ 0.31
PTCD2-208ENST00000510676 EZH2Q15910 746 aaKnown RBP16.97■□□□□ 0.31
PTCD2-208ENST00000510676 ESCO1Q5FWF5 840 aa16.97■□□□□ 0.31
PTCD2-208ENST00000510676 HFM1A2PYH4 1435 aa16.96■□□□□ 0.31
PTCD2-208ENST00000510676 XPCQ01831 940 aaPredicted RBP16.96■□□□□ 0.31
PTCD2-208ENST00000510676 CDC42BPGQ6DT37 1551 aa16.96■□□□□ 0.31
PTCD2-208ENST00000510676 VPS8Q8N3P4 1428 aa16.95■□□□□ 0.3
PTCD2-208ENST00000510676 PLCH1Q4KWH8 1693 aa16.94■□□□□ 0.3
PTCD2-208ENST00000510676 CCDC9Q9Y3X0 531 aaKnown RBP16.93■□□□□ 0.3
PTCD2-208ENST00000510676 ADGRB2O60241 1585 aa16.92■□□□□ 0.3
PTCD2-208ENST00000510676 NEXMIFQ5QGS0 1516 aa16.91■□□□□ 0.3
PTCD2-208ENST00000510676 FAM98CQ17RN3 349 aaKnown RBP16.91■□□□□ 0.3
PTCD2-208ENST00000510676 SPON1Q9HCB6 807 aa16.91■□□□□ 0.3
PTCD2-208ENST00000510676 PPP1R1BQ9UD71 204 aaPredicted RBP16.9■□□□□ 0.3
PTCD2-208ENST00000510676 CCDC144AA2RUR9 1427 aa16.89■□□□□ 0.29
PTCD2-208ENST00000510676 CAMTA1Q9Y6Y1 1673 aa16.89■□□□□ 0.29
PTCD2-208ENST00000510676 A0A0G2JS52 829 aa16.88■□□□□ 0.29
PTCD2-208ENST00000510676 KCNQ2O43526 872 aa16.88■□□□□ 0.29
PTCD2-208ENST00000510676 MYT1Q01538 1121 aa16.88■□□□□ 0.29
PTCD2-208ENST00000510676 MAPK8IP2Q13387 824 aaPredicted RBP16.88■□□□□ 0.29
PTCD2-208ENST00000510676 ZNF326Q5BKZ1 582 aaKnown RBP16.88■□□□□ 0.29
PTCD2-208ENST00000510676 FAM182BQ5T319 152 aa16.88■□□□□ 0.29
PTCD2-208ENST00000510676 RREB1Q92766 1687 aa16.88■□□□□ 0.29
PTCD2-208ENST00000510676 THSD7AQ9UPZ6 1657 aa16.87■□□□□ 0.29
PTCD2-208ENST00000510676 NRAPQ86VF7 1730 aa16.87■□□□□ 0.29
PTCD2-208ENST00000510676 FAM83GA6ND36 823 aa16.86■□□□□ 0.29
PTCD2-208ENST00000510676 TNS3Q68CZ2 1445 aa16.86■□□□□ 0.29
PTCD2-208ENST00000510676 NUP188Q5SRE5 1749 aa16.84■□□□□ 0.29
PTCD2-208ENST00000510676 KIF1AQ12756 1690 aa16.83■□□□□ 0.28
PTCD2-208ENST00000510676 NAIPQ13075 1403 aa16.83■□□□□ 0.28
PTCD2-208ENST00000510676 NBPF8Q3BBV2 869 aa16.83■□□□□ 0.28
PTCD2-208ENST00000510676 NBPF14Q5TI25 921 aa16.83■□□□□ 0.28
PTCD2-208ENST00000510676 CABLES1Q8TDN4 633 aa16.83■□□□□ 0.28
PTCD2-208ENST00000510676 ABCA3Q99758 1704 aa16.83■□□□□ 0.28
PTCD2-208ENST00000510676 SPATA31A5Q5VU36 1347 aa16.82■□□□□ 0.28
PTCD2-208ENST00000510676 SPATA31A7Q8IWB4 1347 aa16.82■□□□□ 0.28
PTCD2-208ENST00000510676 TRIM37O94972 964 aa16.82■□□□□ 0.28
PTCD2-208ENST00000510676 HAP1P54257 671 aaPredicted RBP16.82■□□□□ 0.28
PTCD2-208ENST00000510676 FAM196AQ6ZSG2 479 aa16.82■□□□□ 0.28
PTCD2-208ENST00000510676 KRT28Q7Z3Y7 464 aa16.82■□□□□ 0.28
PTCD2-208ENST00000510676 APBA3O96018 575 aa16.81■□□□□ 0.28
PTCD2-208ENST00000510676 SBNO1A3KN83 1393 aa16.8■□□□□ 0.28
PTCD2-208ENST00000510676 GOLGB1Q14789 3259 aaKnown RBP16.8■□□□□ 0.28
PTCD2-208ENST00000510676 BTG4Q9NY30 223 aa16.79■□□□□ 0.28
PTCD2-208ENST00000510676 ARHGEF10O15013 1369 aa16.78■□□□□ 0.28
PTCD2-208ENST00000510676 NUP155O75694 1391 aa16.78■□□□□ 0.28
PTCD2-208ENST00000510676 VGFO15240 615 aaPredicted RBP16.77■□□□□ 0.28
PTCD2-208ENST00000510676 TECPR2O15040 1411 aa16.77■□□□□ 0.27
PTCD2-208ENST00000510676 RRBP1Q9P2E9 1410 aaKnown RBP16.77■□□□□ 0.27
PTCD2-208ENST00000510676 CHD4Q14839 1912 aa16.76■□□□□ 0.27
PTCD2-208ENST00000510676 PSME1Q06323 249 aa16.76■□□□□ 0.27
PTCD2-208ENST00000510676 COL14A1Q05707 1796 aaKnown RBP16.75■□□□□ 0.27
PTCD2-208ENST00000510676 NUTM2FA1L443 756 aa16.75■□□□□ 0.27
PTCD2-208ENST00000510676 CLTCL1P53675 1640 aa16.74■□□□□ 0.27
PTCD2-208ENST00000510676 FMN2Q9NZ56 1722 aa16.74■□□□□ 0.27
PTCD2-208ENST00000510676 NRKQ7Z2Y5 1582 aa16.74■□□□□ 0.27
PTCD2-208ENST00000510676 ROCK1Q13464 1354 aa16.73■□□□□ 0.27
PTCD2-208ENST00000510676 CASZ1Q86V15 1759 aa16.72■□□□□ 0.27
PTCD2-208ENST00000510676 GIGYF1O75420 1035 aaPredicted RBP16.71■□□□□ 0.27
PTCD2-208ENST00000510676 PTGER2P43116 358 aa16.71■□□□□ 0.27
PTCD2-208ENST00000510676 NRXN1Q9ULB1 1477 aa16.71■□□□□ 0.27
PTCD2-208ENST00000510676 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
PTCD2-208ENST00000510676 PHF8Q9UPP1 1060 aa16.7■□□□□ 0.26
PTCD2-208ENST00000510676 WAPLQ7Z5K2 1190 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms