RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 C8orf34Q49A92 452 aa24.68■■□□□ 1.54
LIN54-209ENST00000510557 SPINK5Q9NQ38 1064 aaPredicted RBP24.67■■□□□ 1.54
LIN54-209ENST00000510557 MORC1Q86VD1 984 aa24.66■■□□□ 1.54
LIN54-209ENST00000510557 CGNL1Q0VF96 1302 aa24.66■■□□□ 1.54
LIN54-209ENST00000510557 PPLO60437 1756 aa24.66■■□□□ 1.54
LIN54-209ENST00000510557 CHGAP10645 457 aaKnown RBP24.65■■□□□ 1.54
LIN54-209ENST00000510557 NPM1P06748 294 aaKnown RBP eCLIP24.65■■□□□ 1.54
LIN54-209ENST00000510557 PUS7Q96PZ0 661 aaKnown RBP24.65■■□□□ 1.54
LIN54-209ENST00000510557 MLH3Q9UHC1 1453 aa24.64■■□□□ 1.54
LIN54-209ENST00000510557 NSD3Q9BZ95 1437 aa24.64■■□□□ 1.54
LIN54-209ENST00000510557 ZC3H13Q5T200 1668 aaKnown RBP24.64■■□□□ 1.54
LIN54-209ENST00000510557 WWC1Q8IX03 1113 aa24.64■■□□□ 1.53
LIN54-209ENST00000510557 QRICH2Q9H0J4 1663 aa24.63■■□□□ 1.53
LIN54-209ENST00000510557 NPATQ14207 1427 aa24.63■■□□□ 1.53
LIN54-209ENST00000510557 USP32Q8NFA0 1604 aa24.63■■□□□ 1.53
LIN54-209ENST00000510557 BCAR3O75815 825 aa24.63■■□□□ 1.53
LIN54-209ENST00000510557 RUNDC1Q96C34 613 aa24.62■■□□□ 1.53
LIN54-209ENST00000510557 TRAK1Q9UPV9 953 aa24.62■■□□□ 1.53
LIN54-209ENST00000510557 POGZQ7Z3K3 1410 aa24.62■■□□□ 1.53
LIN54-209ENST00000510557 AAMPQ13685 434 aa24.61■■□□□ 1.53
LIN54-209ENST00000510557 ADGRB1O14514 1584 aa24.61■■□□□ 1.53
LIN54-209ENST00000510557 NCBP3Q53F19 620 aaKnown RBP24.59■■□□□ 1.53
LIN54-209ENST00000510557 CFAP53Q96M91 514 aa24.59■■□□□ 1.53
LIN54-209ENST00000510557 L1TD1Q5T7N2 865 aaKnown RBP24.59■■□□□ 1.53
LIN54-209ENST00000510557 CANXP27824 592 aaKnown RBP24.58■■□□□ 1.53
LIN54-209ENST00000510557 SHPRHQ149N8 1683 aa24.58■■□□□ 1.53
LIN54-209ENST00000510557 HECW2Q9P2P5 1572 aa24.58■■□□□ 1.52
LIN54-209ENST00000510557 RRAGDQ9NQL2 400 aaPredicted RBP24.58■■□□□ 1.52
LIN54-209ENST00000510557 CD109Q6YHK3 1445 aa24.57■■□□□ 1.52
LIN54-209ENST00000510557 WDR63Q8IWG1 891 aa24.57■■□□□ 1.52
LIN54-209ENST00000510557 SLC12A5Q9H2X9 1139 aa24.56■■□□□ 1.52
LIN54-209ENST00000510557 NSD2O96028 1365 aa24.56■■□□□ 1.52
LIN54-209ENST00000510557 GGT6Q6P531 493 aa24.56■■□□□ 1.52
LIN54-209ENST00000510557 FRMPD1Q5SYB0 1578 aa24.55■■□□□ 1.52
LIN54-209ENST00000510557 DMRT2Q9Y5R5 561 aa24.55■■□□□ 1.52
LIN54-209ENST00000510557 VIRMAQ69YN4 1812 aaKnown RBP24.55■■□□□ 1.52
LIN54-209ENST00000510557 EVC2Q86UK5 1308 aa24.54■■□□□ 1.52
LIN54-209ENST00000510557 RGS3P49796 1198 aa24.54■■□□□ 1.52
LIN54-209ENST00000510557 CCDC27Q2M243 656 aa24.54■■□□□ 1.52
LIN54-209ENST00000510557 POGKQ9P215 609 aa24.54■■□□□ 1.52
LIN54-209ENST00000510557 VGFO15240 615 aaPredicted RBP24.54■■□□□ 1.52
LIN54-209ENST00000510557 CLUAP1Q96AJ1 413 aa24.54■■□□□ 1.52
LIN54-209ENST00000510557 ABCC3O15438 1527 aa24.53■■□□□ 1.52
LIN54-209ENST00000510557 PHF23Q9BUL5 403 aaPredicted RBP24.53■■□□□ 1.52
LIN54-209ENST00000510557 MAPK8IP3Q9UPT6 1336 aa24.53■■□□□ 1.52
LIN54-209ENST00000510557 IQSEC2Q5JU85 1478 aa24.52■■□□□ 1.52
LIN54-209ENST00000510557 TCP11L2Q8N4U5 519 aa24.51■■□□□ 1.51
LIN54-209ENST00000510557 TMEM132EQ6IEE7 984 aa24.5■■□□□ 1.51
LIN54-209ENST00000510557 ANKRD36BQ8N2N9 1353 aa24.5■■□□□ 1.51
LIN54-209ENST00000510557 CAMSAP1Q5T5Y3 1602 aa24.49■■□□□ 1.51
LIN54-209ENST00000510557 MTHFSP49914 203 aa24.49■■□□□ 1.51
LIN54-209ENST00000510557 GLI2P10070 1586 aa24.49■■□□□ 1.51
LIN54-209ENST00000510557 TNNT2P45379 298 aaPredicted RBP24.49■■□□□ 1.51
LIN54-209ENST00000510557 PMFBP1Q8TBY8 1022 aa24.49■■□□□ 1.51
LIN54-209ENST00000510557 IGHDP01880 384 aa24.48■■□□□ 1.51
LIN54-209ENST00000510557 RARSP54136 660 aaKnown RBP24.48■■□□□ 1.51
LIN54-209ENST00000510557 CFAP65Q6ZU64 1925 aaKnown RBP24.47■■□□□ 1.51
LIN54-209ENST00000510557 PIK3C2BO00750 1634 aa24.47■■□□□ 1.51
LIN54-209ENST00000510557 NEUROD2Q15784 382 aa24.46■■□□□ 1.51
LIN54-209ENST00000510557 MYH16Q9H6N6 1097 aa24.46■■□□□ 1.51
LIN54-209ENST00000510557 COG6Q9Y2V7 657 aa24.46■■□□□ 1.51
LIN54-209ENST00000510557 BECN1Q14457 450 aa24.45■■□□□ 1.5
LIN54-209ENST00000510557 PANK1Q8TE04 598 aa24.45■■□□□ 1.5
LIN54-209ENST00000510557 NEO1Q92859 1461 aa24.44■■□□□ 1.5
LIN54-209ENST00000510557 ARHGEF28Q8N1W1 1705 aaKnown RBP24.44■■□□□ 1.5
LIN54-209ENST00000510557 NEXMIFQ5QGS0 1516 aa24.43■■□□□ 1.5
LIN54-209ENST00000510557 ARHGAP31Q2M1Z3 1444 aa24.43■■□□□ 1.5
LIN54-209ENST00000510557 ZMYM3Q14202 1370 aa24.43■■□□□ 1.5
LIN54-209ENST00000510557 NAP1L5Q96NT1 182 aaPredicted RBP24.42■■□□□ 1.5
LIN54-209ENST00000510557 RRP7AQ9Y3A4 280 aaKnown RBP24.42■■□□□ 1.5
LIN54-209ENST00000510557 ZFYVE9O95405 1425 aa24.42■■□□□ 1.5
LIN54-209ENST00000510557 TULP4Q9NRJ4 1543 aa24.42■■□□□ 1.5
LIN54-209ENST00000510557 CT47B1P0C2W7 299 aaPredicted RBP24.41■■□□□ 1.5
LIN54-209ENST00000510557 VSIG10Q8N0Z9 540 aa24.41■■□□□ 1.5
LIN54-209ENST00000510557 PNNQ9H307 717 aaKnown RBP24.41■■□□□ 1.5
LIN54-209ENST00000510557 USP19O94966 1318 aa24.39■■□□□ 1.49
LIN54-209ENST00000510557 SIGLEC1Q9BZZ2 1709 aa24.39■■□□□ 1.49
LIN54-209ENST00000510557 RRP9O43818 475 aaKnown RBP24.38■■□□□ 1.49
LIN54-209ENST00000510557 SLC52A1Q9NWF4 448 aa24.38■■□□□ 1.49
LIN54-209ENST00000510557 U2AF1L5P0DN76 240 aaPredicted RBP24.38■■□□□ 1.49
LIN54-209ENST00000510557 U2AF1Q01081 240 aaKnown RBP eCLIP24.38■■□□□ 1.49
LIN54-209ENST00000510557 HSP90AA2PQ14568 343 aaPredicted RBP24.38■■□□□ 1.49
LIN54-209ENST00000510557 ZMYND15Q9H091 742 aa24.38■■□□□ 1.49
LIN54-209ENST00000510557 HSP90AA1P07900 732 aaKnown RBP24.37■■□□□ 1.49
LIN54-209ENST00000510557 CLCN1P35523 988 aa24.37■■□□□ 1.49
LIN54-209ENST00000510557 OSCARQ8IYS5 282 aa24.36■■□□□ 1.49
LIN54-209ENST00000510557 RWDD1Q9H446 243 aaPredicted RBP24.36■■□□□ 1.49
LIN54-209ENST00000510557 ADGRB2O60241 1585 aa24.36■■□□□ 1.49
LIN54-209ENST00000510557 ABCC11Q96J66 1382 aa24.35■■□□□ 1.49
LIN54-209ENST00000510557 SLKQ9H2G2 1235 aaPredicted RBP24.35■■□□□ 1.49
LIN54-209ENST00000510557 CABP2Q9NPB3 220 aa24.34■■□□□ 1.49
LIN54-209ENST00000510557 GOLGA6L3A6NEY3 463 aa24.33■■□□□ 1.49
LIN54-209ENST00000510557 DIP2CQ9Y2E4 1556 aa24.33■■□□□ 1.49
LIN54-209ENST00000510557 ATAD2Q6PL18 1390 aa24.32■■□□□ 1.48
LIN54-209ENST00000510557 XRCC6P12956 609 aaKnown RBP eCLIP24.32■■□□□ 1.48
LIN54-209ENST00000510557 UPF2Q9HAU5 1272 aaKnown RBP24.31■■□□□ 1.48
LIN54-209ENST00000510557 TERF2IPQ9NYB0 399 aa24.31■■□□□ 1.48
LIN54-209ENST00000510557 IDI1Q13907 227 aa24.31■■□□□ 1.48
LIN54-209ENST00000510557 ZKSCAN2Q63HK3 967 aa24.31■■□□□ 1.48
LIN54-209ENST00000510557 NUTM2DQ5VT03 806 aaPredicted RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms