RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-231ENST00000510245 TK2O00142 265 aa13.22□□□□□ -0.29
CAST-231ENST00000510245 ZBED2Q9BTP6 218 aa13.22□□□□□ -0.29
CAST-231ENST00000510245 CDHR5Q9HBB8 845 aa13.22□□□□□ -0.29
CAST-231ENST00000510245 PLSCR2Q9NRY7 297 aa13.22□□□□□ -0.29
CAST-231ENST00000510245 TULP1O00294 542 aaPredicted RBP13.21□□□□□ -0.29
CAST-231ENST00000510245 VPS9D1Q9Y2B5 631 aa13.21□□□□□ -0.29
CAST-231ENST00000510245 ZMYM4Q5VZL5 1548 aa13.21□□□□□ -0.29
CAST-231ENST00000510245 RICTORQ6R327 1708 aa13.2□□□□□ -0.3
CAST-231ENST00000510245 TOM1O60784 492 aa13.2□□□□□ -0.3
CAST-231ENST00000510245 MAGI2Q86UL8 1455 aa13.19□□□□□ -0.3
CAST-231ENST00000510245 NUTM2FA1L443 756 aa13.19□□□□□ -0.3
CAST-231ENST00000510245 PROX2Q3B8N5 592 aa13.19□□□□□ -0.3
CAST-231ENST00000510245 STAC3Q96MF2 364 aa13.19□□□□□ -0.3
CAST-231ENST00000510245 RBM26Q5T8P6 1007 aaKnown RBP13.18□□□□□ -0.3
CAST-231ENST00000510245 SLC4A5Q9BY07 1137 aa13.18□□□□□ -0.3
CAST-231ENST00000510245 GOLGA3Q08378 1498 aa13.16□□□□□ -0.3
CAST-231ENST00000510245 FAM9AQ8IZU1 332 aaPredicted RBP13.16□□□□□ -0.3
CAST-231ENST00000510245 ZC3H15Q8WU90 426 aaKnown RBP13.16□□□□□ -0.3
CAST-231ENST00000510245 ATP10BO94823 1461 aa13.16□□□□□ -0.3
CAST-231ENST00000510245 C9orf84Q5VXU9 1444 aa13.14□□□□□ -0.31
CAST-231ENST00000510245 ATP10AO60312 1499 aa13.13□□□□□ -0.31
CAST-231ENST00000510245 RGS17Q9UGC6 210 aaPredicted RBP13.13□□□□□ -0.31
CAST-231ENST00000510245 CAMSAP1Q5T5Y3 1602 aa13.13□□□□□ -0.31
CAST-231ENST00000510245 TRAPPC8Q9Y2L5 1435 aa13.13□□□□□ -0.31
CAST-231ENST00000510245 CFAP74Q9C0B2 1584 aa13.12□□□□□ -0.31
CAST-231ENST00000510245 TRIM6-TRIM34B2RNG4 842 aa13.12□□□□□ -0.31
CAST-231ENST00000510245 HRO43593 1189 aa13.12□□□□□ -0.31
CAST-231ENST00000510245 KIAA1468Q9P260 1216 aa13.12□□□□□ -0.31
CAST-231ENST00000510245 MYT1LQ9UL68 1186 aa13.12□□□□□ -0.31
CAST-231ENST00000510245 HECW1Q76N89 1606 aa13.11□□□□□ -0.31
CAST-231ENST00000510245 PRSS12P56730 875 aa13.11□□□□□ -0.31
CAST-231ENST00000510245 MMRN1Q13201 1228 aa13.11□□□□□ -0.31
CAST-231ENST00000510245 CDCA7LQ96GN5 454 aa13.11□□□□□ -0.31
CAST-231ENST00000510245 ESF1Q9H501 851 aaKnown RBP13.11□□□□□ -0.31
CAST-231ENST00000510245 NPDC1Q9NQX5 325 aaPredicted RBP13.11□□□□□ -0.31
CAST-231ENST00000510245 SETD1BQ9UPS6 1966 aaKnown RBP13.11□□□□□ -0.31
CAST-231ENST00000510245 RABGEF1Q9UJ41 708 aa13.1□□□□□ -0.31
CAST-231ENST00000510245 RAPGEF2Q9Y4G8 1499 aa13.09□□□□□ -0.31
CAST-231ENST00000510245 ONECUT3O60422 494 aaPredicted RBP13.08□□□□□ -0.32
CAST-231ENST00000510245 PTGDRQ13258 359 aa13.08□□□□□ -0.32
CAST-231ENST00000510245 PACS2Q86VP3 889 aa13.08□□□□□ -0.32
CAST-231ENST00000510245 NBPF3Q9H094 633 aa13.08□□□□□ -0.32
CAST-231ENST00000510245 TSKSQ9UJT2 592 aa13.08□□□□□ -0.32
CAST-231ENST00000510245 BHMG1C9JSJ3 638 aaPredicted RBP13.07□□□□□ -0.32
CAST-231ENST00000510245 MRPL50Q8N5N7 158 aaKnown RBP13.07□□□□□ -0.32
CAST-231ENST00000510245 GOLGA8CPA6NN73 597 aa13.06□□□□□ -0.32
CAST-231ENST00000510245 FCHSD2O94868 740 aa13.06□□□□□ -0.32
CAST-231ENST00000510245 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
CAST-231ENST00000510245 GPIHBP1Q8IV16 184 aa13.06□□□□□ -0.32
CAST-231ENST00000510245 C3P01024 1663 aa13.05□□□□□ -0.32
CAST-231ENST00000510245 PTPRKQ15262 1439 aa13.05□□□□□ -0.32
CAST-231ENST00000510245 POTEAQ6S8J7 498 aa13.05□□□□□ -0.32
CAST-231ENST00000510245 RNF166Q96A37 237 aaPredicted RBP13.05□□□□□ -0.32
CAST-231ENST00000510245 FAM198AQ9UFP1 575 aa13.04□□□□□ -0.32
CAST-231ENST00000510245 SEPT9Q9UHD8 586 aaPredicted RBP13.04□□□□□ -0.32
CAST-231ENST00000510245 SLC24A3Q9HC58 644 aa13.03□□□□□ -0.32
CAST-231ENST00000510245 SCAPERQ9BY12 1400 aa13.03□□□□□ -0.32
CAST-231ENST00000510245 CPS1P31327 1500 aa13.03□□□□□ -0.32
CAST-231ENST00000510245 RBM27Q9P2N5 1060 aaKnown RBP13.02□□□□□ -0.33
CAST-231ENST00000510245 PLA2R1Q13018 1463 aa13.02□□□□□ -0.33
CAST-231ENST00000510245 SMAPO00193 183 aa13.01□□□□□ -0.33
CAST-231ENST00000510245 PNMA3Q9UL41 463 aa13.01□□□□□ -0.33
CAST-231ENST00000510245 KCTD12Q96CX2 325 aaKnown RBP13□□□□□ -0.33
CAST-231ENST00000510245 TCOF1Q13428 1488 aaKnown RBP12.99□□□□□ -0.33
CAST-231ENST00000510245 NBPF26B4DH59 902 aa12.99□□□□□ -0.33
CAST-231ENST00000510245 ZMYND10O75800 440 aa12.99□□□□□ -0.33
CAST-231ENST00000510245 HIC1Q14526 733 aa12.99□□□□□ -0.33
CAST-231ENST00000510245 NUDT18Q6ZVK8 323 aa12.99□□□□□ -0.33
CAST-231ENST00000510245 TATDN2Q93075 761 aa12.99□□□□□ -0.33
CAST-231ENST00000510245 SETD1AO15047 1707 aaKnown RBP12.99□□□□□ -0.33
CAST-231ENST00000510245 NPATQ14207 1427 aa12.98□□□□□ -0.33
CAST-231ENST00000510245 CNTLNQ9NXG0 1405 aa12.97□□□□□ -0.33
CAST-231ENST00000510245 LAPTM4BQ86VI4 370 aa12.97□□□□□ -0.33
CAST-231ENST00000510245 TTC13Q8NBP0 860 aa12.97□□□□□ -0.33
CAST-231ENST00000510245 PLEKHD1A6NEE1 506 aa12.96□□□□□ -0.33
CAST-231ENST00000510245 C3orf80F5H4A9 247 aa12.96□□□□□ -0.33
CAST-231ENST00000510245 GNPATO15228 680 aa12.96□□□□□ -0.33
CAST-231ENST00000510245 WNT2BQ93097 391 aa12.96□□□□□ -0.33
CAST-231ENST00000510245 SHANK2Q9UPX8 1470 aa12.96□□□□□ -0.34
CAST-231ENST00000510245 CTTNBP2Q8WZ74 1663 aa12.96□□□□□ -0.34
CAST-231ENST00000510245 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.95□□□□□ -0.34
CAST-231ENST00000510245 FAM98CQ17RN3 349 aaKnown RBP12.95□□□□□ -0.34
CAST-231ENST00000510245 SUPT5HO00267 1087 aaKnown RBP12.94□□□□□ -0.34
CAST-231ENST00000510245 GPR37O15354 613 aa12.94□□□□□ -0.34
CAST-231ENST00000510245 BRPF1P55201 1214 aaPredicted RBP12.94□□□□□ -0.34
CAST-231ENST00000510245 ZFRQ96KR1 1074 aaKnown RBP12.94□□□□□ -0.34
CAST-231ENST00000510245 ALKQ9UM73 1620 aa12.94□□□□□ -0.34
CAST-231ENST00000510245 FECHP22830 423 aa12.93□□□□□ -0.34
CAST-231ENST00000510245 FAM161AQ3B820 660 aa12.93□□□□□ -0.34
CAST-231ENST00000510245 RAPGEF6Q8TEU7 1601 aa12.92□□□□□ -0.34
CAST-231ENST00000510245 BARGINQ6ZT62 677 aa12.92□□□□□ -0.34
CAST-231ENST00000510245 ANKK1Q8NFD2 765 aa12.92□□□□□ -0.34
CAST-231ENST00000510245 AGLP35573 1532 aa12.92□□□□□ -0.34
CAST-231ENST00000510245 ZNF518AQ6AHZ1 1483 aa12.91□□□□□ -0.34
CAST-231ENST00000510245 NUP153P49790 1475 aaKnown RBP12.9□□□□□ -0.34
CAST-231ENST00000510245 REREQ9P2R6 1566 aa12.9□□□□□ -0.35
CAST-231ENST00000510245 CEP170BQ9Y4F5 1589 aaPredicted RBP12.9□□□□□ -0.35
CAST-231ENST00000510245 ZNF142P52746 1687 aaPredicted RBP12.89□□□□□ -0.35
CAST-231ENST00000510245 MYO3AQ8NEV4 1616 aa12.89□□□□□ -0.35
CAST-231ENST00000510245 PTPN5P54829 565 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms