RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 LCE2BO14633 110 aa8.54□□□□□ -1.04
CAST-229ENST00000510098 TBC1D2Q9BYX2 928 aa8.54□□□□□ -1.04
CAST-229ENST00000510098 GFRA3O60609 400 aa8.53□□□□□ -1.04
CAST-229ENST00000510098 FDX1P10109 184 aa8.53□□□□□ -1.04
CAST-229ENST00000510098 PCDHGC3Q9UN70 934 aa8.53□□□□□ -1.04
CAST-229ENST00000510098 SYMPKQ92797 1274 aaKnown RBP8.52□□□□□ -1.05
CAST-229ENST00000510098 KDM4CQ9H3R0 1056 aa8.52□□□□□ -1.05
CAST-229ENST00000510098 PRDM9Q9NQV7 894 aa8.52□□□□□ -1.05
CAST-229ENST00000510098 SLC19A1P41440 591 aa8.51□□□□□ -1.05
CAST-229ENST00000510098 Q6ZNB5 142 aa8.51□□□□□ -1.05
CAST-229ENST00000510098 DIXDC1Q155Q3 683 aa8.5□□□□□ -1.05
CAST-229ENST00000510098 MSS51Q4VC12 460 aa8.5□□□□□ -1.05
CAST-229ENST00000510098 TRIM67Q6ZTA4 783 aa8.5□□□□□ -1.05
CAST-229ENST00000510098 USB1Q9BQ65 265 aaKnown RBP8.5□□□□□ -1.05
CAST-229ENST00000510098 SPRYD7Q5W111 196 aa8.49□□□□□ -1.05
CAST-229ENST00000510098 RSBN1LQ6PCB5 846 aaPredicted RBP8.49□□□□□ -1.05
CAST-229ENST00000510098 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
CAST-229ENST00000510098 C6orf229H3BNL8 230 aa8.48□□□□□ -1.05
CAST-229ENST00000510098 PLA2G2CQ5R387 149 aa8.48□□□□□ -1.05
CAST-229ENST00000510098 FAM117AQ9C073 453 aa8.48□□□□□ -1.05
CAST-229ENST00000510098 PCDHB15Q9Y5E8 787 aa8.48□□□□□ -1.05
CAST-229ENST00000510098 SPTLC1O15269 473 aa8.47□□□□□ -1.05
CAST-229ENST00000510098 MYSM1Q5VVJ2 828 aa8.47□□□□□ -1.05
CAST-229ENST00000510098 RIC3Q7Z5B4 369 aa8.47□□□□□ -1.05
CAST-229ENST00000510098 ZNF598Q86UK7 904 aaKnown RBP8.47□□□□□ -1.05
CAST-229ENST00000510098 PDZRN3Q9UPQ7 1066 aa8.47□□□□□ -1.05
CAST-229ENST00000510098 GJA5P36382 358 aa8.46□□□□□ -1.06
CAST-229ENST00000510098 PRR20EP86478 221 aa8.46□□□□□ -1.06
CAST-229ENST00000510098 PRR20CP86479 221 aa8.46□□□□□ -1.06
CAST-229ENST00000510098 PRR20DP86480 221 aa8.46□□□□□ -1.06
CAST-229ENST00000510098 PRR20BP86481 221 aa8.46□□□□□ -1.06
CAST-229ENST00000510098 PRR20AP86496 221 aa8.46□□□□□ -1.06
CAST-229ENST00000510098 FCF1Q9Y324 198 aaKnown RBP8.46□□□□□ -1.06
CAST-229ENST00000510098 MMP16P51512 607 aa8.45□□□□□ -1.06
CAST-229ENST00000510098 NEUROD2Q15784 382 aa8.45□□□□□ -1.06
CAST-229ENST00000510098 TRAF7Q6Q0C0 670 aa8.45□□□□□ -1.06
CAST-229ENST00000510098 RETREG3Q86VR2 466 aa8.45□□□□□ -1.06
CAST-229ENST00000510098 LIMD1Q9UGP4 676 aa8.45□□□□□ -1.06
CAST-229ENST00000510098 DXOO77932 396 aaKnown RBP8.44□□□□□ -1.06
CAST-229ENST00000510098 BRPF1P55201 1214 aaPredicted RBP8.43□□□□□ -1.06
CAST-229ENST00000510098 MTMR2Q13614 643 aa8.43□□□□□ -1.06
CAST-229ENST00000510098 CSPP1Q1MSJ5 1256 aa8.43□□□□□ -1.06
CAST-229ENST00000510098 RSPH6AQ9H0K4 717 aa8.43□□□□□ -1.06
CAST-229ENST00000510098 POLR3EQ9NVU0 708 aa8.43□□□□□ -1.06
CAST-229ENST00000510098 PLEKHG3A1L390 1219 aa8.42□□□□□ -1.06
CAST-229ENST00000510098 GDF9O60383 454 aa8.42□□□□□ -1.06
CAST-229ENST00000510098 CABLES1Q8TDN4 633 aa8.42□□□□□ -1.06
CAST-229ENST00000510098 DDRGK1Q96HY6 314 aa8.42□□□□□ -1.06
CAST-229ENST00000510098 JUNDP17535 347 aa8.41□□□□□ -1.06
CAST-229ENST00000510098 HRCP23327 699 aa8.41□□□□□ -1.06
CAST-229ENST00000510098 RPIAP49247 311 aa8.41□□□□□ -1.06
CAST-229ENST00000510098 PRR7Q8TB68 274 aa8.41□□□□□ -1.06
CAST-229ENST00000510098 SPDYE5A6NIY4 337 aa8.4□□□□□ -1.06
CAST-229ENST00000510098 CLK2P49760 499 aaKnown RBP8.4□□□□□ -1.06
CAST-229ENST00000510098 ZNF697Q5TEC3 545 aa8.4□□□□□ -1.06
CAST-229ENST00000510098 ZBTB3Q9H5J0 574 aa8.4□□□□□ -1.06
CAST-229ENST00000510098 QPCTQ16769 361 aa8.39□□□□□ -1.07
CAST-229ENST00000510098 TUSC1Q2TAM9 212 aa8.39□□□□□ -1.07
CAST-229ENST00000510098 PRPF38BQ5VTL8 546 aaKnown RBP8.39□□□□□ -1.07
CAST-229ENST00000510098 CCDC24Q8N4L8 307 aa8.39□□□□□ -1.07
CAST-229ENST00000510098 CFAP99D6REC4 459 aa8.38□□□□□ -1.07
CAST-229ENST00000510098 LILRB3O75022 631 aa8.38□□□□□ -1.07
CAST-229ENST00000510098 SH3D19Q5HYK7 790 aa8.38□□□□□ -1.07
CAST-229ENST00000510098 NUTM2BA6NNL0 878 aaPredicted RBP8.37□□□□□ -1.07
CAST-229ENST00000510098 NUTM2EB1AL46 878 aaPredicted RBP8.37□□□□□ -1.07
CAST-229ENST00000510098 SKIV2LQ15477 1246 aaKnown RBP8.37□□□□□ -1.07
CAST-229ENST00000510098 NUTM2DQ5VT03 806 aaPredicted RBP8.37□□□□□ -1.07
CAST-229ENST00000510098 NUTM2AQ8IVF1 878 aaPredicted RBP8.37□□□□□ -1.07
CAST-229ENST00000510098 PROCA1Q8NCQ7 364 aaPredicted RBP8.37□□□□□ -1.07
CAST-229ENST00000510098 IL27Q8NEV9 243 aa8.37□□□□□ -1.07
CAST-229ENST00000510098 PKD2L1Q9P0L9 805 aa8.37□□□□□ -1.07
CAST-229ENST00000510098 ZBTB24O43167 697 aaPredicted RBP8.36□□□□□ -1.07
CAST-229ENST00000510098 DGAT1O75907 488 aa8.36□□□□□ -1.07
CAST-229ENST00000510098 NUDT12Q9BQG2 462 aa8.36□□□□□ -1.07
CAST-229ENST00000510098 CD2BP2O95400 341 aaKnown RBP8.35□□□□□ -1.07
CAST-229ENST00000510098 RTL5Q5HYW3 569 aaPredicted RBP8.35□□□□□ -1.07
CAST-229ENST00000510098 DESI1Q6ICB0 168 aa8.35□□□□□ -1.07
CAST-229ENST00000510098 PTPRNQ16849 979 aa8.34□□□□□ -1.07
CAST-229ENST00000510098 PTCRAQ6ISU1 281 aaPredicted RBP8.34□□□□□ -1.07
CAST-229ENST00000510098 ATP1B4Q9UN42 357 aaPredicted RBP8.34□□□□□ -1.07
CAST-229ENST00000510098 CCNYL3P0C7X3 344 aa8.33□□□□□ -1.08
CAST-229ENST00000510098 TRIM32Q13049 653 aa8.33□□□□□ -1.08
CAST-229ENST00000510098 FBXO31Q5XUX0 539 aaPredicted RBP8.33□□□□□ -1.08
CAST-229ENST00000510098 TSC1Q92574 1164 aa8.33□□□□□ -1.08
CAST-229ENST00000510098 MYT1Q01538 1121 aa8.32□□□□□ -1.08
CAST-229ENST00000510098 LYPD8Q6UX82 237 aa8.32□□□□□ -1.08
CAST-229ENST00000510098 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.32□□□□□ -1.08
CAST-229ENST00000510098 EVA1BQ9NVM1 165 aa8.32□□□□□ -1.08
CAST-229ENST00000510098 TNFRSF10AO00220 468 aa8.31□□□□□ -1.08
CAST-229ENST00000510098 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
CAST-229ENST00000510098 FOXC1Q12948 553 aa8.31□□□□□ -1.08
CAST-229ENST00000510098 TOR4AQ9NXH8 423 aa8.31□□□□□ -1.08
CAST-229ENST00000510098 KCNH2Q12809 1159 aa8.29□□□□□ -1.08
CAST-229ENST00000510098 PKDCCQ504Y2 493 aa8.29□□□□□ -1.08
CAST-229ENST00000510098 CTHP32929 405 aa8.29□□□□□ -1.08
CAST-229ENST00000510098 GOPCQ9HD26 462 aa8.29□□□□□ -1.08
CAST-229ENST00000510098 AVPP01185 164 aa8.28□□□□□ -1.08
CAST-229ENST00000510098 SKOR1P84550 965 aa8.28□□□□□ -1.08
CAST-229ENST00000510098 PPP2R2DQ66LE6 453 aa8.28□□□□□ -1.08
CAST-229ENST00000510098 CRIPAKQ8N1N5 446 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms