RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 ADGRF5Q8IZF2 1346 aa22.13■■□□□ 1.13
SMAD5-206ENST00000509962 PRAG1Q86YV5 1406 aa22.13■■□□□ 1.13
SMAD5-206ENST00000509962 LAMC1P11047 1609 aa22.09■■□□□ 1.13
SMAD5-206ENST00000509962 WAPLQ7Z5K2 1190 aa22.09■■□□□ 1.13
SMAD5-206ENST00000509962 ANKRD30BQ9BXX2 1392 aa22.09■■□□□ 1.13
SMAD5-206ENST00000509962 NPHP3Q7Z494 1330 aa22.08■■□□□ 1.13
SMAD5-206ENST00000509962 TMEM132EQ6IEE7 984 aa22.08■■□□□ 1.13
SMAD5-206ENST00000509962 USP21Q9UK80 565 aa22.08■■□□□ 1.13
SMAD5-206ENST00000509962 FOXO3O43524 673 aa22.07■■□□□ 1.12
SMAD5-206ENST00000509962 NUTM2FA1L443 756 aa22.06■■□□□ 1.12
SMAD5-206ENST00000509962 ACIN1Q9UKV3 1341 aaKnown RBP22.06■■□□□ 1.12
SMAD5-206ENST00000509962 TRPC5Q9UL62 973 aaPredicted RBP22.05■■□□□ 1.12
SMAD5-206ENST00000509962 SPATA31E1Q6ZUB1 1445 aa22.05■■□□□ 1.12
SMAD5-206ENST00000509962 LRPPRCP42704 1394 aaKnown RBP22.04■■□□□ 1.12
SMAD5-206ENST00000509962 FNBP4Q8N3X1 1017 aaPredicted RBP22.04■■□□□ 1.12
SMAD5-206ENST00000509962 ABCC11Q96J66 1382 aa22.03■■□□□ 1.12
SMAD5-206ENST00000509962 XPCQ01831 940 aaPredicted RBP22.03■■□□□ 1.12
SMAD5-206ENST00000509962 RGS12O14924 1447 aa22.02■■□□□ 1.12
SMAD5-206ENST00000509962 CDC42BPGQ6DT37 1551 aa22.02■■□□□ 1.12
SMAD5-206ENST00000509962 TECPR2O15040 1411 aa22■■□□□ 1.11
SMAD5-206ENST00000509962 SIRT1Q96EB6 747 aa21.99■■□□□ 1.11
SMAD5-206ENST00000509962 IFT172Q9UG01 1749 aa21.98■■□□□ 1.11
SMAD5-206ENST00000509962 C14orf93Q9H972 538 aaKnown RBP21.98■■□□□ 1.11
SMAD5-206ENST00000509962 COL22A1Q8NFW1 1626 aaPredicted RBP21.98■■□□□ 1.11
SMAD5-206ENST00000509962 PLEKHH1Q9ULM0 1364 aa21.98■■□□□ 1.11
SMAD5-206ENST00000509962 PIK3C2GO75747 1445 aa21.97■■□□□ 1.11
SMAD5-206ENST00000509962 YTHDC2Q9H6S0 1430 aaKnown RBP21.97■■□□□ 1.11
SMAD5-206ENST00000509962 PXDNQ92626 1479 aa21.96■■□□□ 1.11
SMAD5-206ENST00000509962 DHX57Q6P158 1386 aaKnown RBP21.95■■□□□ 1.1
SMAD5-206ENST00000509962 CFAP70Q5T0N1 1121 aa21.94■■□□□ 1.1
SMAD5-206ENST00000509962 KRT28Q7Z3Y7 464 aa21.94■■□□□ 1.1
SMAD5-206ENST00000509962 ATAD2Q6PL18 1390 aa21.94■■□□□ 1.1
SMAD5-206ENST00000509962 MYOM2P54296 1465 aa21.94■■□□□ 1.1
SMAD5-206ENST00000509962 ATRNO75882 1429 aa21.93■■□□□ 1.1
SMAD5-206ENST00000509962 KNDC1Q76NI1 1749 aa21.92■■□□□ 1.1
SMAD5-206ENST00000509962 SPATA31A3Q5VYP0 1347 aa21.91■■□□□ 1.1
SMAD5-206ENST00000509962 PSME1Q06323 249 aa21.91■■□□□ 1.1
SMAD5-206ENST00000509962 BCL9LQ86UU0 1499 aa21.9■■□□□ 1.1
SMAD5-206ENST00000509962 GJD4Q96KN9 370 aaPredicted RBP21.9■■□□□ 1.1
SMAD5-206ENST00000509962 PHF8Q9UPP1 1060 aa21.9■■□□□ 1.1
SMAD5-206ENST00000509962 FMN2Q9NZ56 1722 aa21.89■■□□□ 1.1
SMAD5-206ENST00000509962 HAP1P54257 671 aaPredicted RBP21.89■■□□□ 1.09
SMAD5-206ENST00000509962 SAFB2Q14151 953 aaKnown RBP eCLIP21.89■■□□□ 1.09
SMAD5-206ENST00000509962 POGKQ9P215 609 aa21.89■■□□□ 1.09
SMAD5-206ENST00000509962 MARF1Q9Y4F3 1742 aaKnown RBP21.89■■□□□ 1.09
SMAD5-206ENST00000509962 PRAM1Q96QH2 718 aa21.88■■□□□ 1.09
SMAD5-206ENST00000509962 UNC5CLQ8IV45 518 aa21.87■■□□□ 1.09
SMAD5-206ENST00000509962 KIF1AQ12756 1690 aa21.86■■□□□ 1.09
SMAD5-206ENST00000509962 LMOD2Q6P5Q4 547 aa21.85■■□□□ 1.09
SMAD5-206ENST00000509962 CCDC125Q86Z20 511 aa21.85■■□□□ 1.09
SMAD5-206ENST00000509962 NRXN1Q9ULB1 1477 aa21.84■■□□□ 1.09
SMAD5-206ENST00000509962 PLEKHG5O94827 1062 aa21.84■■□□□ 1.09
SMAD5-206ENST00000509962 RGPD8O14715 1765 aaPredicted RBP21.84■■□□□ 1.09
SMAD5-206ENST00000509962 RAB3GAP2Q9H2M9 1393 aa21.83■■□□□ 1.08
SMAD5-206ENST00000509962 CABLES1Q8TDN4 633 aa21.82■■□□□ 1.08
SMAD5-206ENST00000509962 KDM2AQ9Y2K7 1162 aa21.82■■□□□ 1.08
SMAD5-206ENST00000509962 PMFBP1Q8TBY8 1022 aa21.81■■□□□ 1.08
SMAD5-206ENST00000509962 ZRANB1Q9UGI0 708 aa21.8■■□□□ 1.08
SMAD5-206ENST00000509962 TRAK1Q9UPV9 953 aa21.8■■□□□ 1.08
SMAD5-206ENST00000509962 SLIT2O94813 1529 aa21.8■■□□□ 1.08
SMAD5-206ENST00000509962 TNS3Q68CZ2 1445 aa21.8■■□□□ 1.08
SMAD5-206ENST00000509962 DCAF11Q8TEB1 546 aa21.79■■□□□ 1.08
SMAD5-206ENST00000509962 SBNO1A3KN83 1393 aa21.78■■□□□ 1.08
SMAD5-206ENST00000509962 CCDC9Q9Y3X0 531 aaKnown RBP21.77■■□□□ 1.08
SMAD5-206ENST00000509962 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.77■■□□□ 1.08
SMAD5-206ENST00000509962 RALGAPBQ86X10 1494 aa21.77■■□□□ 1.07
SMAD5-206ENST00000509962 ARHGEF10O15013 1369 aa21.76■■□□□ 1.07
SMAD5-206ENST00000509962 STAC3Q96MF2 364 aa21.76■■□□□ 1.07
SMAD5-206ENST00000509962 HIRIP3Q9BW71 556 aaPredicted RBP21.76■■□□□ 1.07
SMAD5-206ENST00000509962 DLC1Q96QB1 1528 aa21.75■■□□□ 1.07
SMAD5-206ENST00000509962 VPS72Q15906 364 aa21.75■■□□□ 1.07
SMAD5-206ENST00000509962 USP32Q8NFA0 1604 aa21.75■■□□□ 1.07
SMAD5-206ENST00000509962 MINK1Q8N4C8 1332 aaPredicted RBP21.75■■□□□ 1.07
SMAD5-206ENST00000509962 ANKARQ7Z5J8 1434 aa21.74■■□□□ 1.07
SMAD5-206ENST00000509962 SEPT12Q8IYM1 358 aa21.73■■□□□ 1.07
SMAD5-206ENST00000509962 FAM83GA6ND36 823 aa21.72■■□□□ 1.07
SMAD5-206ENST00000509962 GLI3P10071 1580 aa21.72■■□□□ 1.07
SMAD5-206ENST00000509962 GPRASP1Q5JY77 1395 aa21.72■■□□□ 1.07
SMAD5-206ENST00000509962 WASLO00401 505 aaPredicted RBP21.71■■□□□ 1.07
SMAD5-206ENST00000509962 HRCP23327 699 aa21.71■■□□□ 1.07
SMAD5-206ENST00000509962 ONECUT3O60422 494 aaPredicted RBP21.7■■□□□ 1.06
SMAD5-206ENST00000509962 SF3B2Q13435 895 aaKnown RBP21.7■■□□□ 1.06
SMAD5-206ENST00000509962 EIF3AQ14152 1382 aaKnown RBP21.7■■□□□ 1.06
SMAD5-206ENST00000509962 ADGRB1O14514 1584 aa21.7■■□□□ 1.06
SMAD5-206ENST00000509962 NGDNQ8NEJ9 315 aaKnown RBP21.69■■□□□ 1.06
SMAD5-206ENST00000509962 ADGRB2O60241 1585 aa21.67■■□□□ 1.06
SMAD5-206ENST00000509962 BLMP54132 1417 aaPredicted RBP21.67■■□□□ 1.06
SMAD5-206ENST00000509962 PAK3O75914 559 aaPredicted RBP21.67■■□□□ 1.06
SMAD5-206ENST00000509962 NWD2Q9ULI1 1742 aa21.66■■□□□ 1.06
SMAD5-206ENST00000509962 PRR36Q9H6K5 1346 aa21.66■■□□□ 1.06
SMAD5-206ENST00000509962 A0A0G2JS52 829 aa21.66■■□□□ 1.06
SMAD5-206ENST00000509962 MYT1Q01538 1121 aa21.66■■□□□ 1.06
SMAD5-206ENST00000509962 KRT27Q7Z3Y8 459 aa21.66■■□□□ 1.06
SMAD5-206ENST00000509962 BTG4Q9NY30 223 aa21.66■■□□□ 1.06
SMAD5-206ENST00000509962 BRWD3Q6RI45 1802 aa21.66■■□□□ 1.06
SMAD5-206ENST00000509962 PLCH1Q4KWH8 1693 aa21.66■■□□□ 1.06
SMAD5-206ENST00000509962 ABCA3Q99758 1704 aa21.63■■□□□ 1.05
SMAD5-206ENST00000509962 TULP4Q9NRJ4 1543 aa21.62■■□□□ 1.05
SMAD5-206ENST00000509962 DEFB132Q7Z7B7 95 aa21.62■■□□□ 1.05
SMAD5-206ENST00000509962 NUDT16Q96DE0 195 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms