RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 PROSER2Q86WR7 435 aaPredicted RBP19.37■□□□□ 0.69
CYSTM1-204ENST00000509789 ZNF316A6NFI3 1004 aaPredicted RBP19.36■□□□□ 0.69
CYSTM1-204ENST00000509789 TESK2Q96S53 571 aa19.36■□□□□ 0.69
CYSTM1-204ENST00000509789 KNDC1Q76NI1 1749 aa19.36■□□□□ 0.69
CYSTM1-204ENST00000509789 XRN1Q8IZH2 1706 aaKnown RBP19.36■□□□□ 0.69
CYSTM1-204ENST00000509789 CPS1P31327 1500 aa19.35■□□□□ 0.69
CYSTM1-204ENST00000509789 ZNF335Q9H4Z2 1342 aaPredicted RBP19.35■□□□□ 0.69
CYSTM1-204ENST00000509789 ARHGEF28Q8N1W1 1705 aaKnown RBP19.35■□□□□ 0.69
CYSTM1-204ENST00000509789 TMF1P82094 1093 aa19.35■□□□□ 0.69
CYSTM1-204ENST00000509789 PLEKHH1Q9ULM0 1364 aa19.34■□□□□ 0.69
CYSTM1-204ENST00000509789 MINK1Q8N4C8 1332 aaPredicted RBP19.34■□□□□ 0.69
CYSTM1-204ENST00000509789 SBNO2Q9Y2G9 1366 aa19.33■□□□□ 0.69
CYSTM1-204ENST00000509789 NWD1Q149M9 1564 aa19.33■□□□□ 0.69
CYSTM1-204ENST00000509789 NKTRP30414 1462 aaKnown RBP19.33■□□□□ 0.68
CYSTM1-204ENST00000509789 C1QBPQ07021 282 aaKnown RBP19.31■□□□□ 0.68
CYSTM1-204ENST00000509789 CDCA8Q53HL2 280 aa19.31■□□□□ 0.68
CYSTM1-204ENST00000509789 C14orf37Q86TY3 774 aa19.31■□□□□ 0.68
CYSTM1-204ENST00000509789 EVC2Q86UK5 1308 aa19.3■□□□□ 0.68
CYSTM1-204ENST00000509789 RBM33Q96EV2 1170 aaKnown RBP19.29■□□□□ 0.68
CYSTM1-204ENST00000509789 QRICH2Q9H0J4 1663 aa19.29■□□□□ 0.68
CYSTM1-204ENST00000509789 C11orf95C9JLR9 678 aaPredicted RBP19.27■□□□□ 0.68
CYSTM1-204ENST00000509789 CDK19Q9BWU1 502 aa19.27■□□□□ 0.68
CYSTM1-204ENST00000509789 TMEM94Q12767 1356 aa19.27■□□□□ 0.68
CYSTM1-204ENST00000509789 NCOA3Q9Y6Q9 1424 aa19.26■□□□□ 0.67
CYSTM1-204ENST00000509789 WASLO00401 505 aaPredicted RBP19.26■□□□□ 0.67
CYSTM1-204ENST00000509789 STRCP1A6NGW2 1772 aa19.26■□□□□ 0.67
CYSTM1-204ENST00000509789 DISP3Q9P2K9 1392 aa19.25■□□□□ 0.67
CYSTM1-204ENST00000509789 SRPK2P78362 688 aaKnown RBP19.25■□□□□ 0.67
CYSTM1-204ENST00000509789 PUS7Q96PZ0 661 aaKnown RBP19.25■□□□□ 0.67
CYSTM1-204ENST00000509789 POLR3GLQ9BT43 218 aa19.25■□□□□ 0.67
CYSTM1-204ENST00000509789 C19orf44Q9H6X5 657 aa19.24■□□□□ 0.67
CYSTM1-204ENST00000509789 KIF7Q2M1P5 1343 aa19.24■□□□□ 0.67
CYSTM1-204ENST00000509789 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.23■□□□□ 0.67
CYSTM1-204ENST00000509789 CCDC7Q96M83 1385 aa19.23■□□□□ 0.67
CYSTM1-204ENST00000509789 ADGRL3Q9HAR2 1447 aa19.23■□□□□ 0.67
CYSTM1-204ENST00000509789 LRRC7Q96NW7 1537 aa19.22■□□□□ 0.67
CYSTM1-204ENST00000509789 CABP2Q9NPB3 220 aa19.22■□□□□ 0.67
CYSTM1-204ENST00000509789 WASHC2AQ641Q2 1341 aa19.22■□□□□ 0.67
CYSTM1-204ENST00000509789 TULP4Q9NRJ4 1543 aa19.2■□□□□ 0.66
CYSTM1-204ENST00000509789 MSH6P52701 1360 aa19.19■□□□□ 0.66
CYSTM1-204ENST00000509789 ATF3P18847 181 aa19.19■□□□□ 0.66
CYSTM1-204ENST00000509789 ADGRB2O60241 1585 aa19.19■□□□□ 0.66
CYSTM1-204ENST00000509789 CADPS2Q86UW7 1296 aa19.17■□□□□ 0.66
CYSTM1-204ENST00000509789 NUDT16Q96DE0 195 aaKnown RBP19.17■□□□□ 0.66
CYSTM1-204ENST00000509789 LTBP4Q8N2S1 1624 aa19.17■□□□□ 0.66
CYSTM1-204ENST00000509789 ATAD2Q6PL18 1390 aa19.17■□□□□ 0.66
CYSTM1-204ENST00000509789 NUTM2FA1L443 756 aa19.16■□□□□ 0.66
CYSTM1-204ENST00000509789 NCBP3Q53F19 620 aaKnown RBP19.15■□□□□ 0.66
CYSTM1-204ENST00000509789 TMC1Q8TDI8 760 aa19.15■□□□□ 0.66
CYSTM1-204ENST00000509789 DCCP43146 1447 aa19.15■□□□□ 0.66
CYSTM1-204ENST00000509789 CDC42BPGQ6DT37 1551 aa19.15■□□□□ 0.66
CYSTM1-204ENST00000509789 NALCNQ8IZF0 1738 aa19.14■□□□□ 0.66
CYSTM1-204ENST00000509789 CCDC61Q9Y6R9 512 aa19.14■□□□□ 0.65
CYSTM1-204ENST00000509789 DDX10Q13206 875 aaKnown RBP19.13■□□□□ 0.65
CYSTM1-204ENST00000509789 ANKARQ7Z5J8 1434 aa19.12■□□□□ 0.65
CYSTM1-204ENST00000509789 PRR36Q9H6K5 1346 aa19.12■□□□□ 0.65
CYSTM1-204ENST00000509789 SLC12A5Q9H2X9 1139 aa19.12■□□□□ 0.65
CYSTM1-204ENST00000509789 NINLQ9Y2I6 1382 aa19.11■□□□□ 0.65
CYSTM1-204ENST00000509789 CABP1Q9NZU7 370 aa19.11■□□□□ 0.65
CYSTM1-204ENST00000509789 XIRP1Q702N8 1843 aaKnown RBP19.11■□□□□ 0.65
CYSTM1-204ENST00000509789 FMN2Q9NZ56 1722 aa19.08■□□□□ 0.65
CYSTM1-204ENST00000509789 PLEKHG3A1L390 1219 aa19.08■□□□□ 0.64
CYSTM1-204ENST00000509789 ESCO1Q5FWF5 840 aa19.08■□□□□ 0.64
CYSTM1-204ENST00000509789 TERF2IPQ9NYB0 399 aa19.08■□□□□ 0.64
CYSTM1-204ENST00000509789 ATP7BP35670 1465 aa19.08■□□□□ 0.64
CYSTM1-204ENST00000509789 PPIP5K1Q6PFW1 1433 aa19.08■□□□□ 0.64
CYSTM1-204ENST00000509789 PANK3Q9H999 370 aa19.07■□□□□ 0.64
CYSTM1-204ENST00000509789 SLAIN2Q9P270 581 aa19.07■□□□□ 0.64
CYSTM1-204ENST00000509789 C1orf167Q5SNV9 1468 aa19.06■□□□□ 0.64
CYSTM1-204ENST00000509789 HDGFL2Q7Z4V5 671 aaPredicted RBP19.06■□□□□ 0.64
CYSTM1-204ENST00000509789 CERKQ8TCT0 537 aa19.06■□□□□ 0.64
CYSTM1-204ENST00000509789 NPM3O75607 178 aaKnown RBP19.05■□□□□ 0.64
CYSTM1-204ENST00000509789 NGDNQ8NEJ9 315 aaKnown RBP19.05■□□□□ 0.64
CYSTM1-204ENST00000509789 PMFBP1Q8TBY8 1022 aa19.05■□□□□ 0.64
CYSTM1-204ENST00000509789 PHF8Q9UPP1 1060 aa19.05■□□□□ 0.64
CYSTM1-204ENST00000509789 MST1RQ04912 1400 aa19.05■□□□□ 0.64
CYSTM1-204ENST00000509789 ORAI2Q96SN7 254 aa19.04■□□□□ 0.64
CYSTM1-204ENST00000509789 ZNF692Q9BU19 519 aaPredicted RBP19.04■□□□□ 0.64
CYSTM1-204ENST00000509789 USP32Q8NFA0 1604 aa19.03■□□□□ 0.64
CYSTM1-204ENST00000509789 ACEP12821 1306 aa19.02■□□□□ 0.64
CYSTM1-204ENST00000509789 TOM1O60784 492 aa19.02■□□□□ 0.64
CYSTM1-204ENST00000509789 ANKRD36BQ8N2N9 1353 aa19.02■□□□□ 0.64
CYSTM1-204ENST00000509789 IQSEC2Q5JU85 1478 aa19.01■□□□□ 0.63
CYSTM1-204ENST00000509789 KNSTRNQ9Y448 316 aa19■□□□□ 0.63
CYSTM1-204ENST00000509789 MYOM1P52179 1685 aa19■□□□□ 0.63
CYSTM1-204ENST00000509789 RGPD8O14715 1765 aaPredicted RBP19■□□□□ 0.63
CYSTM1-204ENST00000509789 ITSN1Q15811 1721 aa19■□□□□ 0.63
CYSTM1-204ENST00000509789 KTN1Q86UP2 1357 aaKnown RBP18.99■□□□□ 0.63
CYSTM1-204ENST00000509789 CARD14Q9BXL6 1004 aa18.99■□□□□ 0.63
CYSTM1-204ENST00000509789 TOPAZ1Q8N9V7 1692 aa18.98■□□□□ 0.63
CYSTM1-204ENST00000509789 A0A1W2PP64 1363 aa18.98■□□□□ 0.63
CYSTM1-204ENST00000509789 POLR3AO14802 1390 aaPredicted RBP18.98■□□□□ 0.63
CYSTM1-204ENST00000509789 PSME1Q06323 249 aa18.98■□□□□ 0.63
CYSTM1-204ENST00000509789 BRINP3Q76B58 766 aa18.98■□□□□ 0.63
CYSTM1-204ENST00000509789 CPSF1Q10570 1443 aaKnown RBP18.98■□□□□ 0.63
CYSTM1-204ENST00000509789 CD163L1Q9NR16 1453 aa18.97■□□□□ 0.63
CYSTM1-204ENST00000509789 UBAP1LF5GYI3 381 aa18.97■□□□□ 0.63
CYSTM1-204ENST00000509789 FOXO3O43524 673 aa18.97■□□□□ 0.63
CYSTM1-204ENST00000509789 DIEXFQ68CQ4 756 aaKnown RBP18.97■□□□□ 0.63
CYSTM1-204ENST00000509789 PER1O15534 1290 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms