RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 ARHGEF28Q8N1W1 1705 aaKnown RBP28.26■■■□□ 2.11
FGFR4-211ENST00000509511 WAPLQ7Z5K2 1190 aa28.25■■■□□ 2.11
FGFR4-211ENST00000509511 PRAM1Q96QH2 718 aa28.23■■■□□ 2.11
FGFR4-211ENST00000509511 HSPA1LP34931 641 aa28.22■■■□□ 2.11
FGFR4-211ENST00000509511 TRAK1Q9UPV9 953 aa28.22■■■□□ 2.11
FGFR4-211ENST00000509511 ADGRB2O60241 1585 aa28.21■■■□□ 2.11
FGFR4-211ENST00000509511 POGKQ9P215 609 aa28.2■■■□□ 2.11
FGFR4-211ENST00000509511 C1orf167Q5SNV9 1468 aa28.18■■■□□ 2.1
FGFR4-211ENST00000509511 CCER1Q8TC90 406 aaPredicted RBP28.18■■■□□ 2.1
FGFR4-211ENST00000509511 FMN2Q9NZ56 1722 aa28.17■■■□□ 2.1
FGFR4-211ENST00000509511 ROCK2O75116 1388 aaKnown RBP28.17■■■□□ 2.1
FGFR4-211ENST00000509511 NBPF1Q3BBV0 1214 aa28.17■■■□□ 2.1
FGFR4-211ENST00000509511 AHDC1Q5TGY3 1603 aaPredicted RBP28.16■■■□□ 2.1
FGFR4-211ENST00000509511 PHLPP1O60346 1717 aa28.16■■■□□ 2.1
FGFR4-211ENST00000509511 SAFB2Q14151 953 aaKnown RBP eCLIP28.16■■■□□ 2.1
FGFR4-211ENST00000509511 RALGAPBQ86X10 1494 aa28.14■■■□□ 2.1
FGFR4-211ENST00000509511 BRINP3Q76B58 766 aa28.14■■■□□ 2.09
FGFR4-211ENST00000509511 NHSL1Q5SYE7 1610 aa28.12■■■□□ 2.09
FGFR4-211ENST00000509511 COL16A1Q07092 1604 aaPredicted RBP28.1■■■□□ 2.09
FGFR4-211ENST00000509511 GPRASP1Q5JY77 1395 aa28.09■■■□□ 2.09
FGFR4-211ENST00000509511 NBPF8Q3BBV2 869 aa28.09■■■□□ 2.09
FGFR4-211ENST00000509511 EIF3AQ14152 1382 aaKnown RBP28.08■■■□□ 2.09
FGFR4-211ENST00000509511 MINK1Q8N4C8 1332 aaPredicted RBP28.07■■■□□ 2.08
FGFR4-211ENST00000509511 QRICH2Q9H0J4 1663 aa28.06■■■□□ 2.08
FGFR4-211ENST00000509511 KIF1AQ12756 1690 aa28.05■■■□□ 2.08
FGFR4-211ENST00000509511 TIMELESSQ9UNS1 1208 aa28.05■■■□□ 2.08
FGFR4-211ENST00000509511 ANKARQ7Z5J8 1434 aa28.04■■■□□ 2.08
FGFR4-211ENST00000509511 HIRIP3Q9BW71 556 aaPredicted RBP28.04■■■□□ 2.08
FGFR4-211ENST00000509511 TULP4Q9NRJ4 1543 aa28.04■■■□□ 2.08
FGFR4-211ENST00000509511 CENPJQ9HC77 1338 aaPredicted RBP28.03■■■□□ 2.08
FGFR4-211ENST00000509511 NUTM2FA1L443 756 aa28.02■■■□□ 2.08
FGFR4-211ENST00000509511 ORAI2Q96SN7 254 aa28.01■■■□□ 2.07
FGFR4-211ENST00000509511 USP32Q8NFA0 1604 aa28■■■□□ 2.07
FGFR4-211ENST00000509511 ESCO1Q5FWF5 840 aa28■■■□□ 2.07
FGFR4-211ENST00000509511 CARD11Q9BXL7 1154 aa27.99■■■□□ 2.07
FGFR4-211ENST00000509511 WASLO00401 505 aaPredicted RBP27.97■■■□□ 2.07
FGFR4-211ENST00000509511 JCADQ9P266 1359 aa27.97■■■□□ 2.07
FGFR4-211ENST00000509511 ITSN1Q15811 1721 aa27.97■■■□□ 2.07
FGFR4-211ENST00000509511 RGPD8O14715 1765 aaPredicted RBP27.96■■■□□ 2.07
FGFR4-211ENST00000509511 SHPRHQ149N8 1683 aa27.96■■■□□ 2.07
FGFR4-211ENST00000509511 MED1Q15648 1581 aaPredicted RBP27.96■■■□□ 2.07
FGFR4-211ENST00000509511 NPHP3Q7Z494 1330 aa27.95■■■□□ 2.07
FGFR4-211ENST00000509511 ATP7BP35670 1465 aa27.94■■■□□ 2.06
FGFR4-211ENST00000509511 DDX17Q92841 729 aaKnown RBP27.92■■■□□ 2.06
FGFR4-211ENST00000509511 PXDNQ92626 1479 aa27.91■■■□□ 2.06
FGFR4-211ENST00000509511 TOPAZ1Q8N9V7 1692 aa27.9■■■□□ 2.06
FGFR4-211ENST00000509511 SOS2Q07890 1332 aaPredicted RBP27.9■■■□□ 2.06
FGFR4-211ENST00000509511 PHF8Q9UPP1 1060 aa27.9■■■□□ 2.06
FGFR4-211ENST00000509511 PRR36Q9H6K5 1346 aa27.89■■■□□ 2.06
FGFR4-211ENST00000509511 LRRC59Q96AG4 307 aaKnown RBP27.88■■■□□ 2.05
FGFR4-211ENST00000509511 CDK19Q9BWU1 502 aa27.88■■■□□ 2.05
FGFR4-211ENST00000509511 SBNO2Q9Y2G9 1366 aa27.87■■■□□ 2.05
FGFR4-211ENST00000509511 FOXO3O43524 673 aa27.87■■■□□ 2.05
FGFR4-211ENST00000509511 SRPK2P78362 688 aaKnown RBP27.85■■■□□ 2.05
FGFR4-211ENST00000509511 SPATA31A6Q5VVP1 1343 aa27.84■■■□□ 2.05
FGFR4-211ENST00000509511 EVC2Q86UK5 1308 aa27.83■■■□□ 2.05
FGFR4-211ENST00000509511 PNPLA6Q8IY17 1366 aa27.83■■■□□ 2.05
FGFR4-211ENST00000509511 NUDT16Q96DE0 195 aaKnown RBP27.83■■■□□ 2.05
FGFR4-211ENST00000509511 XPCQ01831 940 aaPredicted RBP27.81■■■□□ 2.04
FGFR4-211ENST00000509511 USP47Q96K76 1375 aa27.8■■■□□ 2.04
FGFR4-211ENST00000509511 DISP3Q9P2K9 1392 aa27.8■■■□□ 2.04
FGFR4-211ENST00000509511 PMFBP1Q8TBY8 1022 aa27.8■■■□□ 2.04
FGFR4-211ENST00000509511 COL22A1Q8NFW1 1626 aaPredicted RBP27.79■■■□□ 2.04
FGFR4-211ENST00000509511 CCDC61Q9Y6R9 512 aa27.78■■■□□ 2.04
FGFR4-211ENST00000509511 TNS3Q68CZ2 1445 aa27.78■■■□□ 2.04
FGFR4-211ENST00000509511 CABP2Q9NPB3 220 aa27.77■■■□□ 2.04
FGFR4-211ENST00000509511 LRP6O75581 1613 aa27.77■■■□□ 2.04
FGFR4-211ENST00000509511 PPIP5K1Q6PFW1 1433 aa27.77■■■□□ 2.04
FGFR4-211ENST00000509511 PSME1Q06323 249 aa27.76■■■□□ 2.03
FGFR4-211ENST00000509511 KRT28Q7Z3Y7 464 aa27.76■■■□□ 2.03
FGFR4-211ENST00000509511 NGDNQ8NEJ9 315 aaKnown RBP27.75■■■□□ 2.03
FGFR4-211ENST00000509511 SBNO1A3KN83 1393 aa27.75■■■□□ 2.03
FGFR4-211ENST00000509511 TRPM3Q9HCF6 1732 aaPredicted RBP27.75■■■□□ 2.03
FGFR4-211ENST00000509511 PHF23Q9BUL5 403 aaPredicted RBP27.74■■■□□ 2.03
FGFR4-211ENST00000509511 ATAD2Q6PL18 1390 aa27.73■■■□□ 2.03
FGFR4-211ENST00000509511 POLR3AO14802 1390 aaPredicted RBP27.72■■■□□ 2.03
FGFR4-211ENST00000509511 SPATA31A3Q5VYP0 1347 aa27.72■■■□□ 2.03
FGFR4-211ENST00000509511 ST20-MTHFSA0A0A6YYL1 179 aa27.71■■■□□ 2.03
FGFR4-211ENST00000509511 ARHGEF10O15013 1369 aa27.71■■■□□ 2.03
FGFR4-211ENST00000509511 PLEKHG3A1L390 1219 aa27.68■■■□□ 2.02
FGFR4-211ENST00000509511 NUTM2BA6NNL0 878 aaPredicted RBP27.68■■■□□ 2.02
FGFR4-211ENST00000509511 NUTM2EB1AL46 878 aaPredicted RBP27.68■■■□□ 2.02
FGFR4-211ENST00000509511 SLC24A1O60721 1099 aa27.68■■■□□ 2.02
FGFR4-211ENST00000509511 MEX3CQ5U5Q3 659 aaKnown RBP27.68■■■□□ 2.02
FGFR4-211ENST00000509511 NUTM2AQ8IVF1 878 aaPredicted RBP27.68■■■□□ 2.02
FGFR4-211ENST00000509511 ACEP12821 1306 aa27.68■■■□□ 2.02
FGFR4-211ENST00000509511 ALS2Q96Q42 1657 aa27.67■■■□□ 2.02
FGFR4-211ENST00000509511 TESK2Q96S53 571 aa27.67■■■□□ 2.02
FGFR4-211ENST00000509511 ABCA3Q99758 1704 aa27.63■■■□□ 2.01
FGFR4-211ENST00000509511 LMOD2Q6P5Q4 547 aa27.63■■■□□ 2.01
FGFR4-211ENST00000509511 CABP1Q9NZU7 370 aa27.62■■■□□ 2.01
FGFR4-211ENST00000509511 PAK3O75914 559 aaPredicted RBP27.61■■■□□ 2.01
FGFR4-211ENST00000509511 USP6P35125 1406 aa27.59■■■□□ 2.01
FGFR4-211ENST00000509511 AKAP12Q02952 1782 aa27.59■■■□□ 2.01
FGFR4-211ENST00000509511 BRD4O60885 1362 aaPredicted RBP27.59■■■□□ 2.01
FGFR4-211ENST00000509511 TMF1P82094 1093 aa27.59■■■□□ 2.01
FGFR4-211ENST00000509511 PUS7Q96PZ0 661 aaKnown RBP27.58■■■□□ 2.01
FGFR4-211ENST00000509511 MARF1Q9Y4F3 1742 aaKnown RBP27.57■■■□□ 2
FGFR4-211ENST00000509511 NINLQ9Y2I6 1382 aa27.57■■■□□ 2
FGFR4-211ENST00000509511 ADAMTS2O95450 1211 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms