RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 NOS1P29475 1434 aa12.02□□□□□ -0.49
PDGFRA-208ENST00000509490 POGZQ7Z3K3 1410 aa12.02□□□□□ -0.49
PDGFRA-208ENST00000509490 ADGRF5Q8IZF2 1346 aa12.02□□□□□ -0.49
PDGFRA-208ENST00000509490 SENP3-EIF4A1A0A087X0R7 540 aa12.02□□□□□ -0.49
PDGFRA-208ENST00000509490 NBR1Q14596 966 aa12.01□□□□□ -0.49
PDGFRA-208ENST00000509490 ABCC3O15438 1527 aa12.01□□□□□ -0.49
PDGFRA-208ENST00000509490 ASXL2Q76L83 1435 aa12.01□□□□□ -0.49
PDGFRA-208ENST00000509490 C14orf93Q9H972 538 aaKnown RBP12.01□□□□□ -0.49
PDGFRA-208ENST00000509490 NPATQ14207 1427 aa12.01□□□□□ -0.49
PDGFRA-208ENST00000509490 ARHGAP31Q2M1Z3 1444 aa12.01□□□□□ -0.49
PDGFRA-208ENST00000509490 KCNA4P22459 653 aa12□□□□□ -0.49
PDGFRA-208ENST00000509490 CFAP70Q5T0N1 1121 aa12□□□□□ -0.49
PDGFRA-208ENST00000509490 GLI2P10070 1586 aa11.99□□□□□ -0.49
PDGFRA-208ENST00000509490 ANKRD26Q9UPS8 1709 aa11.99□□□□□ -0.49
PDGFRA-208ENST00000509490 CENPJQ9HC77 1338 aaPredicted RBP11.99□□□□□ -0.49
PDGFRA-208ENST00000509490 CLTCQ00610 1675 aaKnown RBP11.99□□□□□ -0.49
PDGFRA-208ENST00000509490 NEXMIFQ5QGS0 1516 aa11.99□□□□□ -0.49
PDGFRA-208ENST00000509490 MED14O60244 1454 aa11.99□□□□□ -0.49
PDGFRA-208ENST00000509490 WDR63Q8IWG1 891 aa11.99□□□□□ -0.49
PDGFRA-208ENST00000509490 KIF3BO15066 747 aa11.98□□□□□ -0.49
PDGFRA-208ENST00000509490 SPINK5Q9NQ38 1064 aaPredicted RBP11.98□□□□□ -0.49
PDGFRA-208ENST00000509490 MAPK8IP3Q9UPT6 1336 aa11.98□□□□□ -0.49
PDGFRA-208ENST00000509490 APAF1O14727 1248 aa11.98□□□□□ -0.49
PDGFRA-208ENST00000509490 NSD3Q9BZ95 1437 aa11.97□□□□□ -0.49
PDGFRA-208ENST00000509490 TULP4Q9NRJ4 1543 aa11.97□□□□□ -0.49
PDGFRA-208ENST00000509490 NLRP1Q9C000 1473 aa11.97□□□□□ -0.49
PDGFRA-208ENST00000509490 WWC1Q8IX03 1113 aa11.97□□□□□ -0.49
PDGFRA-208ENST00000509490 SIGLEC1Q9BZZ2 1709 aa11.96□□□□□ -0.49
PDGFRA-208ENST00000509490 NEO1Q92859 1461 aa11.96□□□□□ -0.49
PDGFRA-208ENST00000509490 NEFMP07197 916 aa11.95□□□□□ -0.5
PDGFRA-208ENST00000509490 CT47B1P0C2W7 299 aaPredicted RBP11.95□□□□□ -0.5
PDGFRA-208ENST00000509490 RUNDC1Q96C34 613 aa11.95□□□□□ -0.5
PDGFRA-208ENST00000509490 ANKRD36BQ8N2N9 1353 aa11.95□□□□□ -0.5
PDGFRA-208ENST00000509490 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
PDGFRA-208ENST00000509490 CDC42BPGQ6DT37 1551 aa11.94□□□□□ -0.5
PDGFRA-208ENST00000509490 COL3A1P02461 1466 aaPredicted RBP11.94□□□□□ -0.5
PDGFRA-208ENST00000509490 USP19O94966 1318 aa11.93□□□□□ -0.5
PDGFRA-208ENST00000509490 CLUAP1Q96AJ1 413 aa11.93□□□□□ -0.5
PDGFRA-208ENST00000509490 BCAR3O75815 825 aa11.92□□□□□ -0.5
PDGFRA-208ENST00000509490 DMRT2Q9Y5R5 561 aa11.92□□□□□ -0.5
PDGFRA-208ENST00000509490 DIP2CQ9Y2E4 1556 aa11.92□□□□□ -0.5
PDGFRA-208ENST00000509490 CCDC146Q8IYE0 955 aa11.91□□□□□ -0.5
PDGFRA-208ENST00000509490 RARSP54136 660 aaKnown RBP11.91□□□□□ -0.5
PDGFRA-208ENST00000509490 PMFBP1Q8TBY8 1022 aa11.91□□□□□ -0.5
PDGFRA-208ENST00000509490 ABCC11Q96J66 1382 aa11.91□□□□□ -0.5
PDGFRA-208ENST00000509490 NFKBIBQ15653 356 aa11.9□□□□□ -0.5
PDGFRA-208ENST00000509490 IGHDP01880 384 aa11.9□□□□□ -0.5
PDGFRA-208ENST00000509490 RICTORQ6R327 1708 aa11.89□□□□□ -0.51
PDGFRA-208ENST00000509490 SKAP1Q86WV1 359 aa11.89□□□□□ -0.51
PDGFRA-208ENST00000509490 MORC1Q86VD1 984 aa11.89□□□□□ -0.51
PDGFRA-208ENST00000509490 LAS1LQ9Y4W2 734 aaKnown RBP11.89□□□□□ -0.51
PDGFRA-208ENST00000509490 IL16Q14005 1332 aa11.89□□□□□ -0.51
PDGFRA-208ENST00000509490 GSE1Q14687 1217 aa11.88□□□□□ -0.51
PDGFRA-208ENST00000509490 CD109Q6YHK3 1445 aa11.88□□□□□ -0.51
PDGFRA-208ENST00000509490 TMEM131LA2VDJ0 1609 aa11.88□□□□□ -0.51
PDGFRA-208ENST00000509490 EVC2Q86UK5 1308 aa11.87□□□□□ -0.51
PDGFRA-208ENST00000509490 CFAP53Q96M91 514 aa11.87□□□□□ -0.51
PDGFRA-208ENST00000509490 PTPRMP28827 1452 aa11.87□□□□□ -0.51
PDGFRA-208ENST00000509490 PIAS4Q8N2W9 510 aaPredicted RBP11.87□□□□□ -0.51
PDGFRA-208ENST00000509490 TCP11L2Q8N4U5 519 aa11.87□□□□□ -0.51
PDGFRA-208ENST00000509490 MYH16Q9H6N6 1097 aa11.86□□□□□ -0.51
PDGFRA-208ENST00000509490 PREX1Q8TCU6 1659 aa11.86□□□□□ -0.51
PDGFRA-208ENST00000509490 PNPLA6Q8IY17 1366 aa11.86□□□□□ -0.51
PDGFRA-208ENST00000509490 DLC1Q96QB1 1528 aa11.86□□□□□ -0.51
PDGFRA-208ENST00000509490 REREQ9P2R6 1566 aa11.85□□□□□ -0.51
PDGFRA-208ENST00000509490 VGFO15240 615 aaPredicted RBP11.85□□□□□ -0.51
PDGFRA-208ENST00000509490 CD163L1Q9NR16 1453 aa11.85□□□□□ -0.51
PDGFRA-208ENST00000509490 KIF20BQ96Q89 1820 aa11.85□□□□□ -0.51
PDGFRA-208ENST00000509490 SLC12A5Q9H2X9 1139 aa11.85□□□□□ -0.51
PDGFRA-208ENST00000509490 PPIP5K1Q6PFW1 1433 aa11.85□□□□□ -0.51
PDGFRA-208ENST00000509490 ATAD2Q6PL18 1390 aa11.84□□□□□ -0.51
PDGFRA-208ENST00000509490 PLEKHF1Q96S99 279 aa11.83□□□□□ -0.52
PDGFRA-208ENST00000509490 MTHFSP49914 203 aa11.83□□□□□ -0.52
PDGFRA-208ENST00000509490 BRPF1P55201 1214 aaPredicted RBP11.82□□□□□ -0.52
PDGFRA-208ENST00000509490 HDAC1Q13547 482 aaPredicted RBP11.82□□□□□ -0.52
PDGFRA-208ENST00000509490 KLHL34Q8N239 644 aa11.82□□□□□ -0.52
PDGFRA-208ENST00000509490 SLC52A1Q9NWF4 448 aa11.82□□□□□ -0.52
PDGFRA-208ENST00000509490 PANK1Q8TE04 598 aa11.82□□□□□ -0.52
PDGFRA-208ENST00000509490 TBC1D32Q96NH3 1257 aa11.82□□□□□ -0.52
PDGFRA-208ENST00000509490 RWDD1Q9H446 243 aaPredicted RBP11.82□□□□□ -0.52
PDGFRA-208ENST00000509490 BECN1Q14457 450 aa11.82□□□□□ -0.52
PDGFRA-208ENST00000509490 MVPQ14764 893 aaKnown RBP11.82□□□□□ -0.52
PDGFRA-208ENST00000509490 TRAK1Q9UPV9 953 aa11.82□□□□□ -0.52
PDGFRA-208ENST00000509490 COG6Q9Y2V7 657 aa11.82□□□□□ -0.52
PDGFRA-208ENST00000509490 PCDHB15Q9Y5E8 787 aa11.82□□□□□ -0.52
PDGFRA-208ENST00000509490 RGS3P49796 1198 aa11.81□□□□□ -0.52
PDGFRA-208ENST00000509490 ANTXR1Q9H6X2 564 aa11.81□□□□□ -0.52
PDGFRA-208ENST00000509490 TULP1O00294 542 aaPredicted RBP11.81□□□□□ -0.52
PDGFRA-208ENST00000509490 A0A1W2PP64 1363 aa11.81□□□□□ -0.52
PDGFRA-208ENST00000509490 ARHGEF40Q8TER5 1519 aa11.81□□□□□ -0.52
PDGFRA-208ENST00000509490 SETD1AO15047 1707 aaKnown RBP11.81□□□□□ -0.52
PDGFRA-208ENST00000509490 MYO5BQ9ULV0 1848 aa11.8□□□□□ -0.52
PDGFRA-208ENST00000509490 RLBP1P12271 317 aa11.8□□□□□ -0.52
PDGFRA-208ENST00000509490 ZNF428Q96B54 188 aa11.79□□□□□ -0.52
PDGFRA-208ENST00000509490 ATP7BP35670 1465 aa11.79□□□□□ -0.52
PDGFRA-208ENST00000509490 ZKSCAN2Q63HK3 967 aa11.79□□□□□ -0.52
PDGFRA-208ENST00000509490 CANXP27824 592 aaKnown RBP11.78□□□□□ -0.52
PDGFRA-208ENST00000509490 PDZRN3Q9UPQ7 1066 aa11.78□□□□□ -0.52
PDGFRA-208ENST00000509490 AGLP35573 1532 aa11.78□□□□□ -0.52
PDGFRA-208ENST00000509490 ALKQ9UM73 1620 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms