RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 MSS51Q4VC12 460 aa7.85□□□□□ -1.15
SPARCL1-206ENST00000509407 LMOD2Q6P5Q4 547 aa7.85□□□□□ -1.15
SPARCL1-206ENST00000509407 FAM160A2Q8N612 972 aaPredicted RBP7.85□□□□□ -1.15
SPARCL1-206ENST00000509407 TNFRSF10AO00220 468 aa7.84□□□□□ -1.15
SPARCL1-206ENST00000509407 GDF9O60383 454 aa7.84□□□□□ -1.15
SPARCL1-206ENST00000509407 KDM4AO75164 1064 aa7.84□□□□□ -1.15
SPARCL1-206ENST00000509407 CD2BP2O95400 341 aaKnown RBP7.84□□□□□ -1.15
SPARCL1-206ENST00000509407 USP46P62068 366 aa7.84□□□□□ -1.15
SPARCL1-206ENST00000509407 CCDC102AQ96A19 550 aa7.84□□□□□ -1.15
SPARCL1-206ENST00000509407 ZBTB24O43167 697 aaPredicted RBP7.83□□□□□ -1.16
SPARCL1-206ENST00000509407 ZNF787Q6DD87 383 aa7.83□□□□□ -1.16
SPARCL1-206ENST00000509407 RNF19BQ6ZMZ0 732 aa7.83□□□□□ -1.16
SPARCL1-206ENST00000509407 KRI1Q8N9T8 703 aaKnown RBP7.83□□□□□ -1.16
SPARCL1-206ENST00000509407 FAM187AA6NFU0 413 aa7.82□□□□□ -1.16
SPARCL1-206ENST00000509407 CLCN1P35523 988 aa7.82□□□□□ -1.16
SPARCL1-206ENST00000509407 GPCPD1Q9NPB8 672 aa7.82□□□□□ -1.16
SPARCL1-206ENST00000509407 PRDM9Q9NQV7 894 aa7.82□□□□□ -1.16
SPARCL1-206ENST00000509407 FOXC1Q12948 553 aa7.81□□□□□ -1.16
SPARCL1-206ENST00000509407 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.81□□□□□ -1.16
SPARCL1-206ENST00000509407 USB1Q9BQ65 265 aaKnown RBP7.79□□□□□ -1.16
SPARCL1-206ENST00000509407 PKD2L1Q9P0L9 805 aa7.79□□□□□ -1.16
SPARCL1-206ENST00000509407 HOXA2O43364 376 aa7.78□□□□□ -1.16
SPARCL1-206ENST00000509407 MMP16P51512 607 aa7.78□□□□□ -1.16
SPARCL1-206ENST00000509407 FAM217BQ9NTX9 383 aaPredicted RBP7.78□□□□□ -1.16
SPARCL1-206ENST00000509407 NUTM1Q86Y26 1132 aa7.77□□□□□ -1.17
SPARCL1-206ENST00000509407 CYP4X1Q8N118 509 aa7.77□□□□□ -1.17
SPARCL1-206ENST00000509407 DXOO77932 396 aaKnown RBP7.75□□□□□ -1.17
SPARCL1-206ENST00000509407 TRIM32Q13049 653 aa7.74□□□□□ -1.17
SPARCL1-206ENST00000509407 HLA-CQ95604 372 aa7.74□□□□□ -1.17
SPARCL1-206ENST00000509407 TOR4AQ9NXH8 423 aa7.74□□□□□ -1.17
SPARCL1-206ENST00000509407 TTC24A2A3L6 582 aaPredicted RBP7.73□□□□□ -1.17
SPARCL1-206ENST00000509407 CCDC24Q8N4L8 307 aa7.73□□□□□ -1.17
SPARCL1-206ENST00000509407 WNT7AO00755 349 aa7.72□□□□□ -1.17
SPARCL1-206ENST00000509407 ZMYND10O75800 440 aa7.72□□□□□ -1.17
SPARCL1-206ENST00000509407 TTLL12Q14166 644 aaPredicted RBP7.72□□□□□ -1.17
SPARCL1-206ENST00000509407 BARGINQ6ZT62 677 aa7.72□□□□□ -1.17
SPARCL1-206ENST00000509407 AAASQ9NRG9 546 aa7.72□□□□□ -1.17
SPARCL1-206ENST00000509407 ST8SIA5O15466 376 aa7.71□□□□□ -1.18
SPARCL1-206ENST00000509407 JUNDP17535 347 aa7.71□□□□□ -1.18
SPARCL1-206ENST00000509407 SSTR3P32745 418 aaPredicted RBP7.71□□□□□ -1.18
SPARCL1-206ENST00000509407 GUCA2AQ02747 115 aa7.71□□□□□ -1.18
SPARCL1-206ENST00000509407 CRIPAKQ8N1N5 446 aa7.71□□□□□ -1.18
SPARCL1-206ENST00000509407 AVPP01185 164 aa7.7□□□□□ -1.18
SPARCL1-206ENST00000509407 CTC1Q2NKJ3 1217 aa7.7□□□□□ -1.18
SPARCL1-206ENST00000509407 RETREG3Q86VR2 466 aa7.7□□□□□ -1.18
SPARCL1-206ENST00000509407 SNIP1Q8TAD8 396 aaKnown RBP7.7□□□□□ -1.18
SPARCL1-206ENST00000509407 ZC3H15Q8WU90 426 aaKnown RBP7.7□□□□□ -1.18
SPARCL1-206ENST00000509407 REPIN1Q9BWE0 567 aaKnown RBP7.7□□□□□ -1.18
SPARCL1-206ENST00000509407 FDX1P10109 184 aa7.69□□□□□ -1.18
SPARCL1-206ENST00000509407 TRIM26Q12899 539 aaPredicted RBP7.69□□□□□ -1.18
SPARCL1-206ENST00000509407 AMHR2Q16671 573 aa7.69□□□□□ -1.18
SPARCL1-206ENST00000509407 ZNF775Q96BV0 537 aaPredicted RBP7.69□□□□□ -1.18
SPARCL1-206ENST00000509407 C6orf229H3BNL8 230 aa7.68□□□□□ -1.18
SPARCL1-206ENST00000509407 AXIN1O15169 862 aa7.68□□□□□ -1.18
SPARCL1-206ENST00000509407 WNT7BP56706 349 aa7.68□□□□□ -1.18
SPARCL1-206ENST00000509407 SYMPKQ92797 1274 aaKnown RBP7.68□□□□□ -1.18
SPARCL1-206ENST00000509407 MRGPRX2Q96LB1 330 aa7.68□□□□□ -1.18
SPARCL1-206ENST00000509407 GIGYF2Q6Y7W6 1299 aaKnown RBP7.67□□□□□ -1.18
SPARCL1-206ENST00000509407 SPIRE2Q8WWL2 714 aa7.67□□□□□ -1.18
SPARCL1-206ENST00000509407 NUDT12Q9BQG2 462 aa7.67□□□□□ -1.18
SPARCL1-206ENST00000509407 POTECB2RU33 542 aa7.66□□□□□ -1.18
SPARCL1-206ENST00000509407 SUPT5HO00267 1087 aaKnown RBP7.66□□□□□ -1.18
SPARCL1-206ENST00000509407 SMCPP49901 116 aaPredicted RBP7.66□□□□□ -1.18
SPARCL1-206ENST00000509407 RC3H1Q5TC82 1133 aaKnown RBP7.65□□□□□ -1.18
SPARCL1-206ENST00000509407 PCDHGC3Q9UN70 934 aa7.65□□□□□ -1.18
SPARCL1-206ENST00000509407 MS4A1P11836 297 aa7.64□□□□□ -1.19
SPARCL1-206ENST00000509407 SMPD1P17405 629 aa7.64□□□□□ -1.19
SPARCL1-206ENST00000509407 DIXDC1Q155Q3 683 aa7.64□□□□□ -1.19
SPARCL1-206ENST00000509407 MOXD2PA6NHM9 499 aa7.63□□□□□ -1.19
SPARCL1-206ENST00000509407 SPDYE5A6NIY4 337 aa7.63□□□□□ -1.19
SPARCL1-206ENST00000509407 CCNYL3P0C7X3 344 aa7.63□□□□□ -1.19
SPARCL1-206ENST00000509407 NDUFV2P19404 249 aa7.63□□□□□ -1.19
SPARCL1-206ENST00000509407 BEGAINQ9BUH8 593 aa7.63□□□□□ -1.19
SPARCL1-206ENST00000509407 J3QL48 77 aa7.62□□□□□ -1.19
SPARCL1-206ENST00000509407 SKOR1P84550 965 aa7.62□□□□□ -1.19
SPARCL1-206ENST00000509407 MTMR2Q13614 643 aa7.62□□□□□ -1.19
SPARCL1-206ENST00000509407 PTPRNQ16849 979 aa7.62□□□□□ -1.19
SPARCL1-206ENST00000509407 DACH1Q9UI36 760 aa7.62□□□□□ -1.19
SPARCL1-206ENST00000509407 C11orf95C9JLR9 678 aaPredicted RBP7.61□□□□□ -1.19
SPARCL1-206ENST00000509407 GJA5P36382 358 aa7.61□□□□□ -1.19
SPARCL1-206ENST00000509407 PRR7Q8TB68 274 aa7.61□□□□□ -1.19
SPARCL1-206ENST00000509407 AK7Q96M32 723 aa7.61□□□□□ -1.19
SPARCL1-206ENST00000509407 TRIM66O15016 1216 aa7.6□□□□□ -1.19
SPARCL1-206ENST00000509407 DESI1Q6ICB0 168 aa7.6□□□□□ -1.19
SPARCL1-206ENST00000509407 PTCRAQ6ISU1 281 aaPredicted RBP7.6□□□□□ -1.19
SPARCL1-206ENST00000509407 PARP9Q8IXQ6 854 aa7.6□□□□□ -1.19
SPARCL1-206ENST00000509407 EHBP1Q8NDI1 1231 aa7.6□□□□□ -1.19
SPARCL1-206ENST00000509407 TBC1D2Q9BYX2 928 aa7.6□□□□□ -1.19
SPARCL1-206ENST00000509407 GMPR2Q9P2T1 348 aaKnown RBP7.6□□□□□ -1.19
SPARCL1-206ENST00000509407 ALDH1A1P00352 501 aa7.59□□□□□ -1.19
SPARCL1-206ENST00000509407 EVA1BQ9NVM1 165 aa7.59□□□□□ -1.19
SPARCL1-206ENST00000509407 UBTFP17480 764 aaKnown RBP7.58□□□□□ -1.2
SPARCL1-206ENST00000509407 RSBN1LQ6PCB5 846 aaPredicted RBP7.58□□□□□ -1.2
SPARCL1-206ENST00000509407 HPS1Q92902 700 aa7.58□□□□□ -1.2
SPARCL1-206ENST00000509407 UNC93B1Q9H1C4 597 aa7.58□□□□□ -1.2
SPARCL1-206ENST00000509407 KCNH2Q12809 1159 aa7.57□□□□□ -1.2
SPARCL1-206ENST00000509407 SENP2Q9HC62 589 aa7.57□□□□□ -1.2
SPARCL1-206ENST00000509407 ATP13A2Q9NQ11 1180 aa7.57□□□□□ -1.2
SPARCL1-206ENST00000509407 SH3BP2P78314 561 aa7.56□□□□□ -1.2
SPARCL1-206ENST00000509407 ZBTB3Q9H5J0 574 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms