RNA–Protein interactions for RNA: ENST00000509366.5

GABRB1-203, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

TSL 1 (best)

Gene GABRB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-203ENST00000509366 LAMC1P11047 1609 aa21.11■□□□□ 0.97
GABRB1-203ENST00000509366 ABCC11Q96J66 1382 aa21.11■□□□□ 0.97
GABRB1-203ENST00000509366 AFF2P51816 1311 aa21.1■□□□□ 0.97
GABRB1-203ENST00000509366 SOS2Q07890 1332 aaPredicted RBP21.1■□□□□ 0.97
GABRB1-203ENST00000509366 TMEM132EQ6IEE7 984 aa21.1■□□□□ 0.97
GABRB1-203ENST00000509366 RXRBP28702 533 aa21.09■□□□□ 0.97
GABRB1-203ENST00000509366 ESCO1Q5FWF5 840 aa21.09■□□□□ 0.97
GABRB1-203ENST00000509366 C8orf37Q96NL8 207 aa21.09■□□□□ 0.97
GABRB1-203ENST00000509366 KNDC1Q76NI1 1749 aa21.08■□□□□ 0.97
GABRB1-203ENST00000509366 WAPLQ7Z5K2 1190 aa21.08■□□□□ 0.97
GABRB1-203ENST00000509366 YTHDC2Q9H6S0 1430 aaKnown RBP21.08■□□□□ 0.97
GABRB1-203ENST00000509366 NPHP3Q7Z494 1330 aa21.07■□□□□ 0.96
GABRB1-203ENST00000509366 C14orf93Q9H972 538 aaKnown RBP21.06■□□□□ 0.96
GABRB1-203ENST00000509366 MYOM2P54296 1465 aa21.06■□□□□ 0.96
GABRB1-203ENST00000509366 ADAMTS2O95450 1211 aa21.05■□□□□ 0.96
GABRB1-203ENST00000509366 SIRT1Q96EB6 747 aa21.04■□□□□ 0.96
GABRB1-203ENST00000509366 NGLY1Q96IV0 654 aa21.04■□□□□ 0.96
GABRB1-203ENST00000509366 DHX57Q6P158 1386 aaKnown RBP21.04■□□□□ 0.96
GABRB1-203ENST00000509366 NRXN1Q9ULB1 1477 aa21.03■□□□□ 0.96
GABRB1-203ENST00000509366 PLEKHH1Q9ULM0 1364 aa21.03■□□□□ 0.96
GABRB1-203ENST00000509366 NUTM2FA1L443 756 aa21.03■□□□□ 0.96
GABRB1-203ENST00000509366 FOXO3O43524 673 aa21.02■□□□□ 0.96
GABRB1-203ENST00000509366 CDK12Q9NYV4 1490 aaPredicted RBP21.01■□□□□ 0.95
GABRB1-203ENST00000509366 CFAP70Q5T0N1 1121 aa21.01■□□□□ 0.95
GABRB1-203ENST00000509366 QTRT2Q9H974 415 aaKnown RBP21■□□□□ 0.95
GABRB1-203ENST00000509366 RBM6P78332 1123 aaKnown RBP20.99■□□□□ 0.95
GABRB1-203ENST00000509366 FMN2Q9NZ56 1722 aa20.98■□□□□ 0.95
GABRB1-203ENST00000509366 COL22A1Q8NFW1 1626 aaPredicted RBP20.98■□□□□ 0.95
GABRB1-203ENST00000509366 HRCP23327 699 aa20.98■□□□□ 0.95
GABRB1-203ENST00000509366 XPCQ01831 940 aaPredicted RBP20.98■□□□□ 0.95
GABRB1-203ENST00000509366 PXDNQ92626 1479 aa20.98■□□□□ 0.95
GABRB1-203ENST00000509366 POGKQ9P215 609 aa20.96■□□□□ 0.95
GABRB1-203ENST00000509366 KIF1AQ12756 1690 aa20.96■□□□□ 0.95
GABRB1-203ENST00000509366 PRAM1Q96QH2 718 aa20.95■□□□□ 0.94
GABRB1-203ENST00000509366 USP21Q9UK80 565 aa20.95■□□□□ 0.94
GABRB1-203ENST00000509366 UPF1Q92900 1129 aaKnown RBP eCLIP20.94■□□□□ 0.94
GABRB1-203ENST00000509366 STAC3Q96MF2 364 aa20.94■□□□□ 0.94
GABRB1-203ENST00000509366 SAFB2Q14151 953 aaKnown RBP eCLIP20.93■□□□□ 0.94
GABRB1-203ENST00000509366 FNBP4Q8N3X1 1017 aaPredicted RBP20.93■□□□□ 0.94
GABRB1-203ENST00000509366 TRPC5Q9UL62 973 aaPredicted RBP20.93■□□□□ 0.94
GABRB1-203ENST00000509366 DLC1Q96QB1 1528 aa20.93■□□□□ 0.94
GABRB1-203ENST00000509366 DCAF11Q8TEB1 546 aa20.92■□□□□ 0.94
GABRB1-203ENST00000509366 PHF8Q9UPP1 1060 aa20.92■□□□□ 0.94
GABRB1-203ENST00000509366 KDM2AQ9Y2K7 1162 aa20.92■□□□□ 0.94
GABRB1-203ENST00000509366 RGS12O14924 1447 aa20.9■□□□□ 0.94
GABRB1-203ENST00000509366 SPATA31A3Q5VYP0 1347 aa20.9■□□□□ 0.94
GABRB1-203ENST00000509366 KRT28Q7Z3Y7 464 aa20.9■□□□□ 0.94
GABRB1-203ENST00000509366 PSME1Q06323 249 aa20.89■□□□□ 0.93
GABRB1-203ENST00000509366 ADGRB1O14514 1584 aa20.89■□□□□ 0.93
GABRB1-203ENST00000509366 TRAK1Q9UPV9 953 aa20.88■□□□□ 0.93
GABRB1-203ENST00000509366 MARF1Q9Y4F3 1742 aaKnown RBP20.87■□□□□ 0.93
GABRB1-203ENST00000509366 ANKARQ7Z5J8 1434 aa20.87■□□□□ 0.93
GABRB1-203ENST00000509366 RGPD8O14715 1765 aaPredicted RBP20.86■□□□□ 0.93
GABRB1-203ENST00000509366 EIF3AQ14152 1382 aaKnown RBP20.85■□□□□ 0.93
GABRB1-203ENST00000509366 HAP1P54257 671 aaPredicted RBP20.85■□□□□ 0.93
GABRB1-203ENST00000509366 ATRNO75882 1429 aa20.85■□□□□ 0.93
GABRB1-203ENST00000509366 TNS3Q68CZ2 1445 aa20.84■□□□□ 0.93
GABRB1-203ENST00000509366 ADGRB2O60241 1585 aa20.84■□□□□ 0.93
GABRB1-203ENST00000509366 MINK1Q8N4C8 1332 aaPredicted RBP20.82■□□□□ 0.92
GABRB1-203ENST00000509366 LMOD2Q6P5Q4 547 aa20.82■□□□□ 0.92
GABRB1-203ENST00000509366 HIRIP3Q9BW71 556 aaPredicted RBP20.82■□□□□ 0.92
GABRB1-203ENST00000509366 SBNO1A3KN83 1393 aa20.82■□□□□ 0.92
GABRB1-203ENST00000509366 ATAD2Q6PL18 1390 aa20.82■□□□□ 0.92
GABRB1-203ENST00000509366 BCL9LQ86UU0 1499 aa20.81■□□□□ 0.92
GABRB1-203ENST00000509366 ARHGEF10O15013 1369 aa20.81■□□□□ 0.92
GABRB1-203ENST00000509366 PMFBP1Q8TBY8 1022 aa20.8■□□□□ 0.92
GABRB1-203ENST00000509366 USP32Q8NFA0 1604 aa20.78■□□□□ 0.92
GABRB1-203ENST00000509366 GPRASP1Q5JY77 1395 aa20.78■□□□□ 0.92
GABRB1-203ENST00000509366 WASLO00401 505 aaPredicted RBP20.78■□□□□ 0.92
GABRB1-203ENST00000509366 UNC5CLQ8IV45 518 aa20.78■□□□□ 0.92
GABRB1-203ENST00000509366 GJD4Q96KN9 370 aaPredicted RBP20.78■□□□□ 0.92
GABRB1-203ENST00000509366 PLEKHG5O94827 1062 aa20.77■□□□□ 0.92
GABRB1-203ENST00000509366 TULP4Q9NRJ4 1543 aa20.77■□□□□ 0.92
GABRB1-203ENST00000509366 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.76■□□□□ 0.91
GABRB1-203ENST00000509366 CABLES1Q8TDN4 633 aa20.76■□□□□ 0.91
GABRB1-203ENST00000509366 SLIT2O94813 1529 aa20.76■□□□□ 0.91
GABRB1-203ENST00000509366 NGDNQ8NEJ9 315 aaKnown RBP20.73■□□□□ 0.91
GABRB1-203ENST00000509366 PRR36Q9H6K5 1346 aa20.73■□□□□ 0.91
GABRB1-203ENST00000509366 ARHGEF28Q8N1W1 1705 aaKnown RBP20.73■□□□□ 0.91
GABRB1-203ENST00000509366 RALGAPBQ86X10 1494 aa20.71■□□□□ 0.91
GABRB1-203ENST00000509366 KIAA1210Q9ULL0 1709 aa20.7■□□□□ 0.9
GABRB1-203ENST00000509366 ABCA3Q99758 1704 aa20.7■□□□□ 0.9
GABRB1-203ENST00000509366 CCDC9Q9Y3X0 531 aaKnown RBP20.69■□□□□ 0.9
GABRB1-203ENST00000509366 ITSN1Q15811 1721 aa20.69■□□□□ 0.9
GABRB1-203ENST00000509366 TRPM3Q9HCF6 1732 aaPredicted RBP20.69■□□□□ 0.9
GABRB1-203ENST00000509366 NWD2Q9ULI1 1742 aa20.69■□□□□ 0.9
GABRB1-203ENST00000509366 PAK3O75914 559 aaPredicted RBP20.68■□□□□ 0.9
GABRB1-203ENST00000509366 VPS72Q15906 364 aa20.68■□□□□ 0.9
GABRB1-203ENST00000509366 CCDC125Q86Z20 511 aa20.68■□□□□ 0.9
GABRB1-203ENST00000509366 NUDT16Q96DE0 195 aaKnown RBP20.68■□□□□ 0.9
GABRB1-203ENST00000509366 GLI3P10071 1580 aa20.68■□□□□ 0.9
GABRB1-203ENST00000509366 PLCH1Q4KWH8 1693 aa20.67■□□□□ 0.9
GABRB1-203ENST00000509366 CDK19Q9BWU1 502 aa20.66■□□□□ 0.9
GABRB1-203ENST00000509366 ATP7BP35670 1465 aa20.66■□□□□ 0.9
GABRB1-203ENST00000509366 ALS2Q96Q42 1657 aa20.66■□□□□ 0.9
GABRB1-203ENST00000509366 FAM83GA6ND36 823 aa20.65■□□□□ 0.9
GABRB1-203ENST00000509366 NBPF1Q3BBV0 1214 aa20.63■□□□□ 0.89
GABRB1-203ENST00000509366 CCDC61Q9Y6R9 512 aa20.63■□□□□ 0.89
GABRB1-203ENST00000509366 EP400Q96L91 3159 aa20.62■□□□□ 0.89
GABRB1-203ENST00000509366 SEPT12Q8IYM1 358 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms