RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 SPATA31D1Q6ZQQ2 1576 aa19.84■□□□□ 0.77
PHF3-209ENST00000509330 B4GALNT3Q6L9W6 998 aa19.83■□□□□ 0.77
PHF3-209ENST00000509330 ALKQ9UM73 1620 aa19.83■□□□□ 0.76
PHF3-209ENST00000509330 PLEKHH1Q9ULM0 1364 aa19.82■□□□□ 0.76
PHF3-209ENST00000509330 TNRQ92752 1358 aa19.82■□□□□ 0.76
PHF3-209ENST00000509330 TXNDC2Q86VQ3 553 aa19.81■□□□□ 0.76
PHF3-209ENST00000509330 PTPRMP28827 1452 aa19.8■□□□□ 0.76
PHF3-209ENST00000509330 CDK19Q9BWU1 502 aa19.8■□□□□ 0.76
PHF3-209ENST00000509330 GGNBP2Q9H3C7 697 aa19.79■□□□□ 0.76
PHF3-209ENST00000509330 BLMP54132 1417 aaPredicted RBP19.78■□□□□ 0.76
PHF3-209ENST00000509330 METP08581 1390 aa19.78■□□□□ 0.76
PHF3-209ENST00000509330 CGNL1Q0VF96 1302 aa19.78■□□□□ 0.76
PHF3-209ENST00000509330 NPC1L1Q9UHC9 1359 aa19.77■□□□□ 0.76
PHF3-209ENST00000509330 A0A1W2PP64 1363 aa19.77■□□□□ 0.76
PHF3-209ENST00000509330 CABP1Q9NZU7 370 aa19.77■□□□□ 0.76
PHF3-209ENST00000509330 APAF1O14727 1248 aa19.76■□□□□ 0.75
PHF3-209ENST00000509330 MTHFSP49914 203 aa19.75■□□□□ 0.75
PHF3-209ENST00000509330 TSHZ2Q9NRE2 1034 aa19.75■□□□□ 0.75
PHF3-209ENST00000509330 NEUROD2Q15784 382 aa19.75■□□□□ 0.75
PHF3-209ENST00000509330 ANKRD36BQ8N2N9 1353 aa19.75■□□□□ 0.75
PHF3-209ENST00000509330 NCKAP5LQ9HCH0 1330 aa19.75■□□□□ 0.75
PHF3-209ENST00000509330 NUTM2FA1L443 756 aa19.74■□□□□ 0.75
PHF3-209ENST00000509330 SLC26A8Q96RN1 970 aa19.74■□□□□ 0.75
PHF3-209ENST00000509330 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.74■□□□□ 0.751e-6■■□□□ 11.8
PHF3-209ENST00000509330 RCAN3Q9UKA8 241 aa19.74■□□□□ 0.75
PHF3-209ENST00000509330 LTKP29376 864 aa19.73■□□□□ 0.75
PHF3-209ENST00000509330 PPP4R2Q9NY27 417 aa19.73■□□□□ 0.75
PHF3-209ENST00000509330 PLIN1O60240 522 aa19.72■□□□□ 0.75
PHF3-209ENST00000509330 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.72■□□□□ 0.75
PHF3-209ENST00000509330 FBLN1P23142 703 aa19.71■□□□□ 0.75
PHF3-209ENST00000509330 RRP7AQ9Y3A4 280 aaKnown RBP19.71■□□□□ 0.75
PHF3-209ENST00000509330 TMEM2Q9UHN6 1383 aa19.69■□□□□ 0.74
PHF3-209ENST00000509330 TERF2IPQ9NYB0 399 aa19.69■□□□□ 0.74
PHF3-209ENST00000509330 PDE3BQ13370 1112 aa19.68■□□□□ 0.74
PHF3-209ENST00000509330 ATAD2Q6PL18 1390 aa19.68■□□□□ 0.74
PHF3-209ENST00000509330 HDGFP51858 240 aaKnown RBP19.67■□□□□ 0.74
PHF3-209ENST00000509330 RRP1P56182 461 aaKnown RBP19.67■□□□□ 0.74
PHF3-209ENST00000509330 HDGFL2Q7Z4V5 671 aaPredicted RBP19.67■□□□□ 0.74
PHF3-209ENST00000509330 PPM1GO15355 546 aaPredicted RBP19.66■□□□□ 0.74
PHF3-209ENST00000509330 SPINK5Q9NQ38 1064 aaPredicted RBP19.66■□□□□ 0.74
PHF3-209ENST00000509330 FYB1O15117 783 aa19.66■□□□□ 0.74
PHF3-209ENST00000509330 DMRT2Q9Y5R5 561 aa19.66■□□□□ 0.74
PHF3-209ENST00000509330 NRXN3Q9Y4C0 1643 aa19.65■□□□□ 0.74
PHF3-209ENST00000509330 PUS7Q96PZ0 661 aaKnown RBP19.65■□□□□ 0.74
PHF3-209ENST00000509330 U2SURPO15042 1029 aaKnown RBP19.64■□□□□ 0.73
PHF3-209ENST00000509330 GOLGA2Q08379 1002 aa19.64■□□□□ 0.73
PHF3-209ENST00000509330 ABCC11Q96J66 1382 aa19.64■□□□□ 0.73
PHF3-209ENST00000509330 RNF123Q5XPI4 1314 aa19.63■□□□□ 0.73
PHF3-209ENST00000509330 U2AF1L5P0DN76 240 aaPredicted RBP19.63■□□□□ 0.73
PHF3-209ENST00000509330 U2AF1Q01081 240 aaKnown RBP eCLIP19.63■□□□□ 0.73
PHF3-209ENST00000509330 CD163L1Q9NR16 1453 aa19.63■□□□□ 0.73
PHF3-209ENST00000509330 WASLO00401 505 aaPredicted RBP19.63■□□□□ 0.73
PHF3-209ENST00000509330 EXOC6Q8TAG9 804 aa19.63■□□□□ 0.73
PHF3-209ENST00000509330 POLR3AO14802 1390 aaPredicted RBP19.63■□□□□ 0.73
PHF3-209ENST00000509330 CFAP53Q96M91 514 aa19.62■□□□□ 0.73
PHF3-209ENST00000509330 CCDC136Q96JN2 1154 aa19.62■□□□□ 0.73
PHF3-209ENST00000509330 ZRANB1Q9UGI0 708 aa19.62■□□□□ 0.73
PHF3-209ENST00000509330 EID1Q9Y6B2 187 aa19.61■□□□□ 0.73
PHF3-209ENST00000509330 SETD1AO15047 1707 aaKnown RBP19.61■□□□□ 0.73
PHF3-209ENST00000509330 UBR1Q8IWV7 1749 aa19.61■□□□□ 0.73
PHF3-209ENST00000509330 ROBO2Q9HCK4 1378 aa19.61■□□□□ 0.73
PHF3-209ENST00000509330 DUSP27Q5VZP5 1158 aa19.6■□□□□ 0.73
PHF3-209ENST00000509330 ERICH6BQ5W0A0 696 aa19.6■□□□□ 0.73
PHF3-209ENST00000509330 NUDT16Q96DE0 195 aaKnown RBP19.6■□□□□ 0.73
PHF3-209ENST00000509330 INSRP06213 1382 aa19.59■□□□□ 0.73
PHF3-209ENST00000509330 ZNF521Q96K83 1311 aa19.58■□□□□ 0.73
PHF3-209ENST00000509330 ADAMTS13Q76LX8 1427 aa19.58■□□□□ 0.72
PHF3-209ENST00000509330 NME9Q86XW9 330 aa19.58■□□□□ 0.72
PHF3-209ENST00000509330 TCP11L2Q8N4U5 519 aa19.58■□□□□ 0.72
PHF3-209ENST00000509330 NINLQ9Y2I6 1382 aa19.58■□□□□ 0.72
PHF3-209ENST00000509330 PPIP5K1Q6PFW1 1433 aa19.58■□□□□ 0.72
PHF3-209ENST00000509330 C20orf194Q5TEA3 1177 aa19.56■□□□□ 0.72
PHF3-209ENST00000509330 C3P01024 1663 aa19.56■□□□□ 0.72
PHF3-209ENST00000509330 SLFN5Q08AF3 891 aa19.56■□□□□ 0.72
PHF3-209ENST00000509330 NSD2O96028 1365 aa19.55■□□□□ 0.72
PHF3-209ENST00000509330 FER1L4A9Z1Z3 1794 aa19.55■□□□□ 0.72
PHF3-209ENST00000509330 AMOTL2Q9Y2J4 779 aa19.55■□□□□ 0.72
PHF3-209ENST00000509330 DLC1Q96QB1 1528 aa19.55■□□□□ 0.72
PHF3-209ENST00000509330 PRR36Q9H6K5 1346 aa19.54■□□□□ 0.72
PHF3-209ENST00000509330 RUNDC1Q96C34 613 aa19.54■□□□□ 0.72
PHF3-209ENST00000509330 RBM33Q96EV2 1170 aaKnown RBP19.54■□□□□ 0.72
PHF3-209ENST00000509330 NLRP1Q9C000 1473 aa19.53■□□□□ 0.72
PHF3-209ENST00000509330 SOX12O15370 315 aa19.53■□□□□ 0.72
PHF3-209ENST00000509330 WWC1Q8IX03 1113 aa19.53■□□□□ 0.72
PHF3-209ENST00000509330 USP32Q8NFA0 1604 aa19.53■□□□□ 0.72
PHF3-209ENST00000509330 CCDC61Q9Y6R9 512 aa19.53■□□□□ 0.72
PHF3-209ENST00000509330 SHPRHQ149N8 1683 aa19.52■□□□□ 0.72
PHF3-209ENST00000509330 THEMISQ8N1K5 641 aaPredicted RBP19.52■□□□□ 0.72
PHF3-209ENST00000509330 PLEKHG1Q9ULL1 1385 aa19.52■□□□□ 0.72
PHF3-209ENST00000509330 CRBNQ96SW2 442 aa19.52■□□□□ 0.71
PHF3-209ENST00000509330 PTPRUQ92729 1446 aa19.51■□□□□ 0.71
PHF3-209ENST00000509330 EMILIN1Q9Y6C2 1016 aa19.51■□□□□ 0.71
PHF3-209ENST00000509330 PMFBP1Q8TBY8 1022 aa19.5■□□□□ 0.71
PHF3-209ENST00000509330 BCAR3O75815 825 aa19.5■□□□□ 0.71
PHF3-209ENST00000509330 RRS1Q15050 365 aaKnown RBP19.5■□□□□ 0.71
PHF3-209ENST00000509330 RBM19Q9Y4C8 960 aaKnown RBP19.48■□□□□ 0.71
PHF3-209ENST00000509330 E9PSI1 815 aa19.47■□□□□ 0.71
PHF3-209ENST00000509330 DIAPH1O60610 1272 aaKnown RBP19.47■□□□□ 0.71
PHF3-209ENST00000509330 POLKQ9UBT6 870 aa19.47■□□□□ 0.71
PHF3-209ENST00000509330 FAM135BQ49AJ0 1406 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms