RNA–Protein interactions for RNA: ENST00000509227.1

PAPD4-212, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 4

Gene PAPD4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-212ENST00000509227 HPS1Q92902 700 aa10.55□□□□□ -0.72
PAPD4-212ENST00000509227 MRGPRX2Q96LB1 330 aa10.55□□□□□ -0.72
PAPD4-212ENST00000509227 SALL2Q9Y467 1007 aaPredicted RBP10.54□□□□□ -0.72
PAPD4-212ENST00000509227 PRDM9Q9NQV7 894 aa10.53□□□□□ -0.72
PAPD4-212ENST00000509227 MLLT3P42568 568 aaPredicted RBP10.52□□□□□ -0.73
PAPD4-212ENST00000509227 TRIM32Q13049 653 aa10.52□□□□□ -0.73
PAPD4-212ENST00000509227 PXYLP1Q8TE99 480 aa10.52□□□□□ -0.73
PAPD4-212ENST00000509227 OATP04181 439 aa10.51□□□□□ -0.73
PAPD4-212ENST00000509227 REPIN1Q9BWE0 567 aaKnown RBP10.51□□□□□ -0.73
PAPD4-212ENST00000509227 ATP6V1AP38606 617 aa10.5□□□□□ -0.73
PAPD4-212ENST00000509227 MSS51Q4VC12 460 aa10.5□□□□□ -0.73
PAPD4-212ENST00000509227 SLC27A5Q9Y2P5 690 aa10.5□□□□□ -0.73
PAPD4-212ENST00000509227 H3BM21 787 aa10.49□□□□□ -0.73
PAPD4-212ENST00000509227 FUT2Q10981 343 aa10.49□□□□□ -0.73
PAPD4-212ENST00000509227 BRICD5Q6PL45 260 aa10.49□□□□□ -0.73
PAPD4-212ENST00000509227 ERBB4Q15303 1308 aa10.45□□□□□ -0.74
PAPD4-212ENST00000509227 NUTM2FA1L443 756 aa10.44□□□□□ -0.74
PAPD4-212ENST00000509227 SEMA3EO15041 775 aa10.44□□□□□ -0.74
PAPD4-212ENST00000509227 FECHP22830 423 aa10.43□□□□□ -0.74
PAPD4-212ENST00000509227 VEGFBP49765 207 aa10.43□□□□□ -0.74
PAPD4-212ENST00000509227 METTL3Q86U44 580 aaKnown RBP10.43□□□□□ -0.74
PAPD4-212ENST00000509227 RDH13Q8NBN7 331 aa10.43□□□□□ -0.74
PAPD4-212ENST00000509227 FCHSD2O94868 740 aa10.42□□□□□ -0.74
PAPD4-212ENST00000509227 MMP16P51512 607 aa10.41□□□□□ -0.74
PAPD4-212ENST00000509227 KCNMA1Q12791 1236 aa10.41□□□□□ -0.74
PAPD4-212ENST00000509227 RC3H1Q5TC82 1133 aaKnown RBP10.4□□□□□ -0.74
PAPD4-212ENST00000509227 RNF19BQ6ZMZ0 732 aa10.4□□□□□ -0.74
PAPD4-212ENST00000509227 TRIM46Q7Z4K8 759 aa10.4□□□□□ -0.74
PAPD4-212ENST00000509227 DAXXQ9UER7 740 aaPredicted RBP10.4□□□□□ -0.74
PAPD4-212ENST00000509227 GCGRP47871 477 aa10.39□□□□□ -0.75
PAPD4-212ENST00000509227 KCTD17Q8N5Z5 321 aa10.39□□□□□ -0.75
PAPD4-212ENST00000509227 ARHGEF1Q92888 912 aaKnown RBP10.39□□□□□ -0.75
PAPD4-212ENST00000509227 BMP1P13497 986 aa10.38□□□□□ -0.75
PAPD4-212ENST00000509227 GSK3AP49840 483 aa10.37□□□□□ -0.75
PAPD4-212ENST00000509227 WNT7BP56706 349 aa10.37□□□□□ -0.75
PAPD4-212ENST00000509227 SKOR1P84550 965 aa10.36□□□□□ -0.75
PAPD4-212ENST00000509227 DDX11L8A8MPP1 907 aa10.35□□□□□ -0.75
PAPD4-212ENST00000509227 ALDH1A1P00352 501 aa10.35□□□□□ -0.75
PAPD4-212ENST00000509227 CAPN5O15484 640 aaPredicted RBP10.34□□□□□ -0.75
PAPD4-212ENST00000509227 Q3C1V9 767 aa10.33□□□□□ -0.76
PAPD4-212ENST00000509227 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
PAPD4-212ENST00000509227 DXOO77932 396 aaKnown RBP10.32□□□□□ -0.76
PAPD4-212ENST00000509227 VSIG8P0DPA2 414 aa10.32□□□□□ -0.76
PAPD4-212ENST00000509227 VSIG10Q8N0Z9 540 aa10.32□□□□□ -0.76
PAPD4-212ENST00000509227 SULF1Q8IWU6 871 aa10.31□□□□□ -0.76
PAPD4-212ENST00000509227 HIC1Q14526 733 aa10.3□□□□□ -0.76
PAPD4-212ENST00000509227 SIAH2O43255 324 aa10.29□□□□□ -0.76
PAPD4-212ENST00000509227 RBM26Q5T8P6 1007 aaKnown RBP10.29□□□□□ -0.76
PAPD4-212ENST00000509227 TMEM151AQ8N4L1 468 aa10.29□□□□□ -0.76
PAPD4-212ENST00000509227 TESPA1A2RU30 521 aaPredicted RBP10.28□□□□□ -0.76
PAPD4-212ENST00000509227 ZFP42Q96MM3 310 aa10.28□□□□□ -0.76
PAPD4-212ENST00000509227 USB1Q9BQ65 265 aaKnown RBP10.27□□□□□ -0.77
PAPD4-212ENST00000509227 CCDC24Q8N4L8 307 aa10.26□□□□□ -0.77
PAPD4-212ENST00000509227 WASF2Q9Y6W5 498 aa10.26□□□□□ -0.77
PAPD4-212ENST00000509227 GDF11O95390 407 aa10.25□□□□□ -0.77
PAPD4-212ENST00000509227 RASSF7Q02833 373 aa10.24□□□□□ -0.77
PAPD4-212ENST00000509227 GPR37O15354 613 aa10.23□□□□□ -0.77
PAPD4-212ENST00000509227 P3H3Q8IVL6 736 aa10.22□□□□□ -0.77
PAPD4-212ENST00000509227 EHBP1Q8NDI1 1231 aa10.21□□□□□ -0.77
PAPD4-212ENST00000509227 NLRP7Q8WX94 980 aa10.2□□□□□ -0.78
PAPD4-212ENST00000509227 RNF225M0QZC1 329 aaPredicted RBP10.19□□□□□ -0.78
PAPD4-212ENST00000509227 GNPATO15228 680 aa10.18□□□□□ -0.78
PAPD4-212ENST00000509227 MRPL14Q6P1L8 145 aaKnown RBP10.17□□□□□ -0.78
PAPD4-212ENST00000509227 SCARF1Q14162 830 aa10.16□□□□□ -0.78
PAPD4-212ENST00000509227 PHOX2BQ99453 314 aa10.15□□□□□ -0.78
PAPD4-212ENST00000509227 SOBPA7XYQ1 873 aa10.13□□□□□ -0.79
PAPD4-212ENST00000509227 JUNDP17535 347 aa10.13□□□□□ -0.79
PAPD4-212ENST00000509227 PURBQ96QR8 312 aaKnown RBP10.13□□□□□ -0.79
PAPD4-212ENST00000509227 IGHA1P01876 353 aa10.12□□□□□ -0.79
PAPD4-212ENST00000509227 PTCRAQ6ISU1 281 aaPredicted RBP10.12□□□□□ -0.79
PAPD4-212ENST00000509227 ADAMTS8Q9UP79 889 aa10.12□□□□□ -0.79
PAPD4-212ENST00000509227 KDM4AO75164 1064 aa10.11□□□□□ -0.79
PAPD4-212ENST00000509227 CD46P15529 392 aa10.11□□□□□ -0.79
PAPD4-212ENST00000509227 SH3BP2P78314 561 aa10.11□□□□□ -0.79
PAPD4-212ENST00000509227 PPFIA3O75145 1194 aa10.09□□□□□ -0.79
PAPD4-212ENST00000509227 XP32Q5T750 250 aa10.09□□□□□ -0.79
PAPD4-212ENST00000509227 MPNDQ8N594 471 aa10.09□□□□□ -0.79
PAPD4-212ENST00000509227 NUDT12Q9BQG2 462 aa10.09□□□□□ -0.79
PAPD4-212ENST00000509227 DNMT3AQ9Y6K1 912 aaPredicted RBP10.09□□□□□ -0.79
PAPD4-212ENST00000509227 PLEKHG3A1L390 1219 aa10.08□□□□□ -0.8
PAPD4-212ENST00000509227 USP46P62068 366 aa10.08□□□□□ -0.8
PAPD4-212ENST00000509227 NNTQ13423 1086 aa10.08□□□□□ -0.8
PAPD4-212ENST00000509227 TIMP2P16035 220 aa10.07□□□□□ -0.8
PAPD4-212ENST00000509227 GPAT2Q6NUI2 795 aa10.07□□□□□ -0.8
PAPD4-212ENST00000509227 TLL2Q9Y6L7 1015 aa10.07□□□□□ -0.8
PAPD4-212ENST00000509227 ADH1CP00326 375 aa10.06□□□□□ -0.8
PAPD4-212ENST00000509227 HLA-CQ95604 372 aa10.06□□□□□ -0.8
PAPD4-212ENST00000509227 MAN1A2O60476 641 aa10.04□□□□□ -0.8
PAPD4-212ENST00000509227 WDR4P57081 412 aaKnown RBP10.04□□□□□ -0.8
PAPD4-212ENST00000509227 FOXK2Q01167 660 aa10.04□□□□□ -0.8
PAPD4-212ENST00000509227 KRT76Q01546 638 aa10.04□□□□□ -0.8
PAPD4-212ENST00000509227 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.04□□□□□ -0.8
PAPD4-212ENST00000509227 KLF16Q9BXK1 252 aaPredicted RBP10.04□□□□□ -0.8
PAPD4-212ENST00000509227 SLC24A1O60721 1099 aa10.03□□□□□ -0.8
PAPD4-212ENST00000509227 HOXA2O43364 376 aa10.02□□□□□ -0.81
PAPD4-212ENST00000509227 VARSP26640 1264 aaKnown RBP10.01□□□□□ -0.81
PAPD4-212ENST00000509227 RETREG3Q86VR2 466 aa10□□□□□ -0.81
PAPD4-212ENST00000509227 CNTNAP3BQ96NU0 1288 aa10□□□□□ -0.81
PAPD4-212ENST00000509227 CNTNAP3Q9BZ76 1288 aa10□□□□□ -0.81
PAPD4-212ENST00000509227 CCNYL3P0C7X3 344 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms