RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 HSPA2P54652 639 aa14.49□□□□□ -0.09
RFC1-211ENST00000509084 TMF1P82094 1093 aa14.49□□□□□ -0.09
RFC1-211ENST00000509084 HIRIP3Q9BW71 556 aaPredicted RBP14.49□□□□□ -0.09
RFC1-211ENST00000509084 NWD1Q149M9 1564 aa14.48□□□□□ -0.09
RFC1-211ENST00000509084 CDCA8Q53HL2 280 aa14.48□□□□□ -0.09
RFC1-211ENST00000509084 STK26Q9P289 416 aa14.48□□□□□ -0.09
RFC1-211ENST00000509084 STRCQ7RTU9 1775 aa14.47□□□□□ -0.09
RFC1-211ENST00000509084 ILDR1Q86SU0 546 aaPredicted RBP14.47□□□□□ -0.09
RFC1-211ENST00000509084 TESK2Q96S53 571 aa14.47□□□□□ -0.09
RFC1-211ENST00000509084 CHD2O14647 1828 aaKnown RBP14.47□□□□□ -0.09
RFC1-211ENST00000509084 PTPRUQ92729 1446 aa14.47□□□□□ -0.09
RFC1-211ENST00000509084 POGKQ9P215 609 aa14.46□□□□□ -0.09
RFC1-211ENST00000509084 CCDC7Q96M83 1385 aa14.46□□□□□ -0.1
RFC1-211ENST00000509084 PRAM1Q96QH2 718 aa14.45□□□□□ -0.1
RFC1-211ENST00000509084 FOXD4L1Q9NU39 408 aa14.45□□□□□ -0.1
RFC1-211ENST00000509084 AMOTL2Q9Y2J4 779 aa14.45□□□□□ -0.1
RFC1-211ENST00000509084 NKTRP30414 1462 aaKnown RBP14.44□□□□□ -0.1
RFC1-211ENST00000509084 KIF7Q2M1P5 1343 aa14.43□□□□□ -0.1
RFC1-211ENST00000509084 ADGRB2O60241 1585 aa14.43□□□□□ -0.1
RFC1-211ENST00000509084 WASHC2AQ641Q2 1341 aa14.42□□□□□ -0.1
RFC1-211ENST00000509084 EVC2Q86UK5 1308 aa14.42□□□□□ -0.1
RFC1-211ENST00000509084 MYCNP04198 464 aaPredicted RBP14.42□□□□□ -0.1
RFC1-211ENST00000509084 KCNA6P17658 529 aa14.42□□□□□ -0.1
RFC1-211ENST00000509084 PUS7Q96PZ0 661 aaKnown RBP14.42□□□□□ -0.1
RFC1-211ENST00000509084 ROBO2Q9HCK4 1378 aa14.42□□□□□ -0.1
RFC1-211ENST00000509084 DISP3Q9P2K9 1392 aa14.42□□□□□ -0.1
RFC1-211ENST00000509084 TULP4Q9NRJ4 1543 aa14.41□□□□□ -0.1
RFC1-211ENST00000509084 SAMD1Q6SPF0 538 aaPredicted RBP14.4□□□□□ -0.1
RFC1-211ENST00000509084 PLEKHH1Q9ULM0 1364 aa14.39□□□□□ -0.11
RFC1-211ENST00000509084 C11orf95C9JLR9 678 aaPredicted RBP14.39□□□□□ -0.11
RFC1-211ENST00000509084 ATAD2Q6PL18 1390 aa14.38□□□□□ -0.11
RFC1-211ENST00000509084 SAFB2Q14151 953 aaKnown RBP eCLIP14.38□□□□□ -0.11
RFC1-211ENST00000509084 WAPLQ7Z5K2 1190 aa14.38□□□□□ -0.11
RFC1-211ENST00000509084 MINK1Q8N4C8 1332 aaPredicted RBP14.38□□□□□ -0.11
RFC1-211ENST00000509084 CAPN15O75808 1086 aa14.37□□□□□ -0.11
RFC1-211ENST00000509084 NCOA3Q9Y6Q9 1424 aa14.37□□□□□ -0.11
RFC1-211ENST00000509084 NINLQ9Y2I6 1382 aa14.36□□□□□ -0.11
RFC1-211ENST00000509084 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.36□□□□□ -0.11
RFC1-211ENST00000509084 POLR3GLQ9BT43 218 aa14.36□□□□□ -0.11
RFC1-211ENST00000509084 CDC42BPGQ6DT37 1551 aa14.35□□□□□ -0.11
RFC1-211ENST00000509084 ADGRL3Q9HAR2 1447 aa14.35□□□□□ -0.11
RFC1-211ENST00000509084 WASLO00401 505 aaPredicted RBP14.34□□□□□ -0.11
RFC1-211ENST00000509084 DDX10Q13206 875 aaKnown RBP14.34□□□□□ -0.11
RFC1-211ENST00000509084 SPINK5Q9NQ38 1064 aaPredicted RBP14.34□□□□□ -0.11
RFC1-211ENST00000509084 MYOM1P52179 1685 aa14.33□□□□□ -0.11
RFC1-211ENST00000509084 NALCNQ8IZF0 1738 aa14.33□□□□□ -0.12
RFC1-211ENST00000509084 SRPK2P78362 688 aaKnown RBP14.33□□□□□ -0.12
RFC1-211ENST00000509084 DIEXFQ68CQ4 756 aaKnown RBP14.33□□□□□ -0.12
RFC1-211ENST00000509084 STRCP1A6NGW2 1772 aa14.32□□□□□ -0.12
RFC1-211ENST00000509084 CDK19Q9BWU1 502 aa14.32□□□□□ -0.12
RFC1-211ENST00000509084 PROSER2Q86WR7 435 aaPredicted RBP14.31□□□□□ -0.12
RFC1-211ENST00000509084 DCCP43146 1447 aa14.31□□□□□ -0.12
RFC1-211ENST00000509084 ANKARQ7Z5J8 1434 aa14.31□□□□□ -0.12
RFC1-211ENST00000509084 ITSN1Q15811 1721 aa14.3□□□□□ -0.12
RFC1-211ENST00000509084 FMN2Q9NZ56 1722 aa14.3□□□□□ -0.12
RFC1-211ENST00000509084 ATP7BP35670 1465 aa14.3□□□□□ -0.12
RFC1-211ENST00000509084 C14orf37Q86TY3 774 aa14.29□□□□□ -0.12
RFC1-211ENST00000509084 CABP2Q9NPB3 220 aa14.29□□□□□ -0.12
RFC1-211ENST00000509084 TMEM94Q12767 1356 aa14.28□□□□□ -0.12
RFC1-211ENST00000509084 TOPAZ1Q8N9V7 1692 aa14.28□□□□□ -0.12
RFC1-211ENST00000509084 ZNF335Q9H4Z2 1342 aaPredicted RBP14.28□□□□□ -0.12
RFC1-211ENST00000509084 LRRC7Q96NW7 1537 aa14.27□□□□□ -0.12
RFC1-211ENST00000509084 ANKRD36BQ8N2N9 1353 aa14.27□□□□□ -0.12
RFC1-211ENST00000509084 TMC1Q8TDI8 760 aa14.26□□□□□ -0.13
RFC1-211ENST00000509084 C19orf44Q9H6X5 657 aa14.26□□□□□ -0.13
RFC1-211ENST00000509084 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
RFC1-211ENST00000509084 PPIP5K1Q6PFW1 1433 aa14.25□□□□□ -0.13
RFC1-211ENST00000509084 MSH6P52701 1360 aa14.25□□□□□ -0.13
RFC1-211ENST00000509084 ZBTB22O15209 634 aa14.25□□□□□ -0.13
RFC1-211ENST00000509084 NUDT16Q96DE0 195 aaKnown RBP14.25□□□□□ -0.13
RFC1-211ENST00000509084 TERF2IPQ9NYB0 399 aa14.25□□□□□ -0.13
RFC1-211ENST00000509084 USP32Q8NFA0 1604 aa14.25□□□□□ -0.13
RFC1-211ENST00000509084 PANK3Q9H999 370 aa14.24□□□□□ -0.13
RFC1-211ENST00000509084 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
RFC1-211ENST00000509084 PRR36Q9H6K5 1346 aa14.23□□□□□ -0.13
RFC1-211ENST00000509084 XIRP1Q702N8 1843 aaKnown RBP14.23□□□□□ -0.13
RFC1-211ENST00000509084 HDGFL2Q7Z4V5 671 aaPredicted RBP14.23□□□□□ -0.13
RFC1-211ENST00000509084 ANP32CO43423 234 aa14.22□□□□□ -0.13
RFC1-211ENST00000509084 ATF3P18847 181 aa14.22□□□□□ -0.13
RFC1-211ENST00000509084 CADPS2Q86UW7 1296 aa14.22□□□□□ -0.13
RFC1-211ENST00000509084 SLC12A5Q9H2X9 1139 aa14.22□□□□□ -0.13
RFC1-211ENST00000509084 A0A1W2PP64 1363 aa14.22□□□□□ -0.13
RFC1-211ENST00000509084 KTN1Q86UP2 1357 aaKnown RBP14.22□□□□□ -0.13
RFC1-211ENST00000509084 RBM33Q96EV2 1170 aaKnown RBP14.21□□□□□ -0.13
RFC1-211ENST00000509084 CABP1Q9NZU7 370 aa14.21□□□□□ -0.13
RFC1-211ENST00000509084 KNSTRNQ9Y448 316 aa14.21□□□□□ -0.13
RFC1-211ENST00000509084 LTBP4Q8N2S1 1624 aa14.21□□□□□ -0.13
RFC1-211ENST00000509084 AKAP12Q02952 1782 aa14.21□□□□□ -0.13
RFC1-211ENST00000509084 NPC1L1Q9UHC9 1359 aa14.21□□□□□ -0.14
RFC1-211ENST00000509084 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
RFC1-211ENST00000509084 CD163L1Q9NR16 1453 aa14.2□□□□□ -0.14
RFC1-211ENST00000509084 PLEKHG3A1L390 1219 aa14.2□□□□□ -0.14
RFC1-211ENST00000509084 CPSF1Q10570 1443 aaKnown RBP14.2□□□□□ -0.14
RFC1-211ENST00000509084 NSD3Q9BZ95 1437 aa14.2□□□□□ -0.14
RFC1-211ENST00000509084 MON2Q7Z3U7 1717 aa14.2□□□□□ -0.14
RFC1-211ENST00000509084 PER1O15534 1290 aaPredicted RBP14.19□□□□□ -0.14
RFC1-211ENST00000509084 ZNF692Q9BU19 519 aaPredicted RBP14.19□□□□□ -0.14
RFC1-211ENST00000509084 NSD2O96028 1365 aa14.19□□□□□ -0.14
RFC1-211ENST00000509084 MST1RQ04912 1400 aa14.18□□□□□ -0.14
RFC1-211ENST00000509084 EDC4Q6P2E9 1401 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms