RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 ROBO1Q9Y6N7 1651 aa15.22■□□□□ 0.03
POLR2J3-213ENST00000508848 WAPLQ7Z5K2 1190 aa15.22■□□□□ 0.03
POLR2J3-213ENST00000508848 HSPA1LP34931 641 aa15.21■□□□□ 0.03
POLR2J3-213ENST00000508848 TRPM1Q7Z4N2 1603 aa15.2■□□□□ 0.02
POLR2J3-213ENST00000508848 TONSLQ96HA7 1378 aa15.2■□□□□ 0.02
POLR2J3-213ENST00000508848 PRAM1Q96QH2 718 aa15.19■□□□□ 0.02
POLR2J3-213ENST00000508848 GPRASP1Q5JY77 1395 aa15.19■□□□□ 0.02
POLR2J3-213ENST00000508848 C1orf167Q5SNV9 1468 aa15.19■□□□□ 0.02
POLR2J3-213ENST00000508848 ADGRB2O60241 1585 aa15.19■□□□□ 0.02
POLR2J3-213ENST00000508848 SCAF1Q9H7N4 1312 aaKnown RBP15.18■□□□□ 0.02
POLR2J3-213ENST00000508848 AHDC1Q5TGY3 1603 aaPredicted RBP15.18■□□□□ 0.02
POLR2J3-213ENST00000508848 NBPF1Q3BBV0 1214 aa15.18■□□□□ 0.02
POLR2J3-213ENST00000508848 BRINP3Q76B58 766 aa15.18■□□□□ 0.02
POLR2J3-213ENST00000508848 POGKQ9P215 609 aa15.18■□□□□ 0.02
POLR2J3-213ENST00000508848 TRAK1Q9UPV9 953 aa15.18■□□□□ 0.02
POLR2J3-213ENST00000508848 ARHGEF28Q8N1W1 1705 aaKnown RBP15.17■□□□□ 0.02
POLR2J3-213ENST00000508848 PLEKHH1Q9ULM0 1364 aa15.17■□□□□ 0.02
POLR2J3-213ENST00000508848 EIF3AQ14152 1382 aaKnown RBP15.16■□□□□ 0.02
POLR2J3-213ENST00000508848 FMN2Q9NZ56 1722 aa15.16■□□□□ 0.02
POLR2J3-213ENST00000508848 ANKARQ7Z5J8 1434 aa15.15■□□□□ 0.02
POLR2J3-213ENST00000508848 NHSL1Q5SYE7 1610 aa15.14■□□□□ 0.01
POLR2J3-213ENST00000508848 ADRA2BP18089 450 aa15.14■□□□□ 0.01
POLR2J3-213ENST00000508848 NBPF8Q3BBV2 869 aa15.14■□□□□ 0.01
POLR2J3-213ENST00000508848 PHLPP1O60346 1717 aa15.14■□□□□ 0.01
POLR2J3-213ENST00000508848 SLC24A1O60721 1099 aa15.13■□□□□ 0.01
POLR2J3-213ENST00000508848 WASLO00401 505 aaPredicted RBP15.12■□□□□ 0.01
POLR2J3-213ENST00000508848 ROCK2O75116 1388 aaKnown RBP15.11■□□□□ 0.01
POLR2J3-213ENST00000508848 COL16A1Q07092 1604 aaPredicted RBP15.11■□□□□ 0.01
POLR2J3-213ENST00000508848 LRRC59Q96AG4 307 aaKnown RBP15.11■□□□□ 0.01
POLR2J3-213ENST00000508848 RALGAPBQ86X10 1494 aa15.11■□□□□ 0.01
POLR2J3-213ENST00000508848 SOS2Q07890 1332 aaPredicted RBP15.11■□□□□ 0.01
POLR2J3-213ENST00000508848 ORAI2Q96SN7 254 aa15.1■□□□□ 0.01
POLR2J3-213ENST00000508848 RGPD8O14715 1765 aaPredicted RBP15.1■□□□□ 0.01
POLR2J3-213ENST00000508848 NPHP3Q7Z494 1330 aa15.1■□□□□ 0.01
POLR2J3-213ENST00000508848 CENPJQ9HC77 1338 aaPredicted RBP15.1■□□□□ 0.01
POLR2J3-213ENST00000508848 JCADQ9P266 1359 aa15.1■□□□□ 0.01
POLR2J3-213ENST00000508848 SBNO2Q9Y2G9 1366 aa15.1■□□□□ 0.01
POLR2J3-213ENST00000508848 KIF1AQ12756 1690 aa15.09■□□□□ 0.01
POLR2J3-213ENST00000508848 ESCO1Q5FWF5 840 aa15.09■□□□□ 0.01
POLR2J3-213ENST00000508848 CCER1Q8TC90 406 aaPredicted RBP15.09■□□□□ 0.01
POLR2J3-213ENST00000508848 SHPRHQ149N8 1683 aa15.08■□□□□ 0
POLR2J3-213ENST00000508848 TULP4Q9NRJ4 1543 aa15.07■□□□□ 0
POLR2J3-213ENST00000508848 PUS7Q96PZ0 661 aaKnown RBP15.07■□□□□ 0
POLR2J3-213ENST00000508848 SPATA31A6Q5VVP1 1343 aa15.07■□□□□ 0
POLR2J3-213ENST00000508848 SAFB2Q14151 953 aaKnown RBP eCLIP15.06■□□□□ 0
POLR2J3-213ENST00000508848 CARD11Q9BXL7 1154 aa15.06■□□□□ 0
POLR2J3-213ENST00000508848 PHF8Q9UPP1 1060 aa15.06■□□□□ 0
POLR2J3-213ENST00000508848 MINK1Q8N4C8 1332 aaPredicted RBP15.06■□□□□ 0
POLR2J3-213ENST00000508848 USP32Q8NFA0 1604 aa15.06■□□□□ 0
POLR2J3-213ENST00000508848 CCDC61Q9Y6R9 512 aa15.05■□□□□ -0
POLR2J3-213ENST00000508848 ITSN1Q15811 1721 aa15.05■□□□□ -0
POLR2J3-213ENST00000508848 QRICH2Q9H0J4 1663 aa15.04■□□□□ -0
POLR2J3-213ENST00000508848 PLEKHG3A1L390 1219 aa15.04■□□□□ -0
POLR2J3-213ENST00000508848 CDK19Q9BWU1 502 aa15.04■□□□□ -0
POLR2J3-213ENST00000508848 FOXO3O43524 673 aa15.03■□□□□ -0
POLR2J3-213ENST00000508848 PSME1Q06323 249 aa15.03■□□□□ -0
POLR2J3-213ENST00000508848 NUDT16Q96DE0 195 aaKnown RBP15.03■□□□□ -0
POLR2J3-213ENST00000508848 PXDNQ92626 1479 aa15.02■□□□□ -0
POLR2J3-213ENST00000508848 EVC2Q86UK5 1308 aa15.02■□□□□ -0
POLR2J3-213ENST00000508848 PRR36Q9H6K5 1346 aa15.02■□□□□ -0
POLR2J3-213ENST00000508848 HIRIP3Q9BW71 556 aaPredicted RBP15.02■□□□□ -0
POLR2J3-213ENST00000508848 SBNO1A3KN83 1393 aa15.01□□□□□ -0.01
POLR2J3-213ENST00000508848 BRD4O60885 1362 aaPredicted RBP15.01□□□□□ -0.01
POLR2J3-213ENST00000508848 ATP7BP35670 1465 aa15.01□□□□□ -0.01
POLR2J3-213ENST00000508848 KRT28Q7Z3Y7 464 aa15□□□□□ -0.01
POLR2J3-213ENST00000508848 POLR3AO14802 1390 aaPredicted RBP14.99□□□□□ -0.01
POLR2J3-213ENST00000508848 COL22A1Q8NFW1 1626 aaPredicted RBP14.99□□□□□ -0.01
POLR2J3-213ENST00000508848 MED1Q15648 1581 aaPredicted RBP14.99□□□□□ -0.01
POLR2J3-213ENST00000508848 NUTM2FA1L443 756 aa14.99□□□□□ -0.01
POLR2J3-213ENST00000508848 TOPAZ1Q8N9V7 1692 aa14.99□□□□□ -0.01
POLR2J3-213ENST00000508848 PNPLA6Q8IY17 1366 aa14.98□□□□□ -0.01
POLR2J3-213ENST00000508848 SPATA31A3Q5VYP0 1347 aa14.98□□□□□ -0.01
POLR2J3-213ENST00000508848 DDX17Q92841 729 aaKnown RBP14.97□□□□□ -0.01
POLR2J3-213ENST00000508848 TESK2Q96S53 571 aa14.96□□□□□ -0.01
POLR2J3-213ENST00000508848 ZNF692Q9BU19 519 aaPredicted RBP14.96□□□□□ -0.01
POLR2J3-213ENST00000508848 ATAD2Q6PL18 1390 aa14.96□□□□□ -0.02
POLR2J3-213ENST00000508848 SRPK2P78362 688 aaKnown RBP14.95□□□□□ -0.02
POLR2J3-213ENST00000508848 NGDNQ8NEJ9 315 aaKnown RBP14.95□□□□□ -0.02
POLR2J3-213ENST00000508848 ARHGEF10O15013 1369 aa14.95□□□□□ -0.02
POLR2J3-213ENST00000508848 TRPM3Q9HCF6 1732 aaPredicted RBP14.95□□□□□ -0.02
POLR2J3-213ENST00000508848 ST20-MTHFSA0A0A6YYL1 179 aa14.94□□□□□ -0.02
POLR2J3-213ENST00000508848 PMFBP1Q8TBY8 1022 aa14.94□□□□□ -0.02
POLR2J3-213ENST00000508848 ACEP12821 1306 aa14.93□□□□□ -0.02
POLR2J3-213ENST00000508848 TNS3Q68CZ2 1445 aa14.92□□□□□ -0.02
POLR2J3-213ENST00000508848 CABP2Q9NPB3 220 aa14.92□□□□□ -0.02
POLR2J3-213ENST00000508848 USP47Q96K76 1375 aa14.92□□□□□ -0.02
POLR2J3-213ENST00000508848 DISP3Q9P2K9 1392 aa14.92□□□□□ -0.02
POLR2J3-213ENST00000508848 ALS2Q96Q42 1657 aa14.92□□□□□ -0.02
POLR2J3-213ENST00000508848 NINLQ9Y2I6 1382 aa14.91□□□□□ -0.02
POLR2J3-213ENST00000508848 CDCA8Q53HL2 280 aa14.91□□□□□ -0.02
POLR2J3-213ENST00000508848 PPIP5K1Q6PFW1 1433 aa14.91□□□□□ -0.02
POLR2J3-213ENST00000508848 MARF1Q9Y4F3 1742 aaKnown RBP14.9□□□□□ -0.02
POLR2J3-213ENST00000508848 CABP1Q9NZU7 370 aa14.9□□□□□ -0.02
POLR2J3-213ENST00000508848 LRP6O75581 1613 aa14.89□□□□□ -0.03
POLR2J3-213ENST00000508848 CPSF1Q10570 1443 aaKnown RBP14.89□□□□□ -0.03
POLR2J3-213ENST00000508848 TMF1P82094 1093 aa14.88□□□□□ -0.03
POLR2J3-213ENST00000508848 XPCQ01831 940 aaPredicted RBP14.88□□□□□ -0.03
POLR2J3-213ENST00000508848 SSH2Q76I76 1423 aa14.88□□□□□ -0.03
POLR2J3-213ENST00000508848 AKAP12Q02952 1782 aa14.88□□□□□ -0.03
POLR2J3-213ENST00000508848 ZNF772Q68DY9 489 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms