RNA–Protein interactions for RNA: ENST00000508836.1

C4orf46-203, Transcript of chromosome 4 open reading frame 46, humanhuman

TSL 1 (best)

Gene C4orf46, Length 1,103 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-203ENST00000508836 FNBP4Q8N3X1 1017 aaPredicted RBP17■□□□□ 0.31
C4orf46-203ENST00000508836 PTCH1Q13635 1447 aa16.99■□□□□ 0.31
C4orf46-203ENST00000508836 CAPN15O75808 1086 aa16.99■□□□□ 0.31
C4orf46-203ENST00000508836 NRXN3Q9Y4C0 1643 aa16.99■□□□□ 0.31
C4orf46-203ENST00000508836 NALCNQ8IZF0 1738 aa16.99■□□□□ 0.31
C4orf46-203ENST00000508836 E9PCH4 1651 aa16.98■□□□□ 0.31
C4orf46-203ENST00000508836 SOS2Q07890 1332 aaPredicted RBP16.96■□□□□ 0.31
C4orf46-203ENST00000508836 C1orf167Q5SNV9 1468 aa16.96■□□□□ 0.31
C4orf46-203ENST00000508836 LAMC1P11047 1609 aa16.96■□□□□ 0.3
C4orf46-203ENST00000508836 METP08581 1390 aa16.95■□□□□ 0.3
C4orf46-203ENST00000508836 LRP5O75197 1615 aa16.94■□□□□ 0.3
C4orf46-203ENST00000508836 ATF5Q9Y2D1 282 aaPredicted RBP16.93■□□□□ 0.3
C4orf46-203ENST00000508836 BLMP54132 1417 aaPredicted RBP16.93■□□□□ 0.3
C4orf46-203ENST00000508836 ORAI2Q96SN7 254 aa16.92■□□□□ 0.3
C4orf46-203ENST00000508836 BCL9LQ86UU0 1499 aa16.92■□□□□ 0.3
C4orf46-203ENST00000508836 COL22A1Q8NFW1 1626 aaPredicted RBP16.92■□□□□ 0.3
C4orf46-203ENST00000508836 DEFB132Q7Z7B7 95 aa16.91■□□□□ 0.3
C4orf46-203ENST00000508836 GJD4Q96KN9 370 aaPredicted RBP16.91■□□□□ 0.3
C4orf46-203ENST00000508836 IQGAP3Q86VI3 1631 aa16.9■□□□□ 0.3
C4orf46-203ENST00000508836 MARF1Q9Y4F3 1742 aaKnown RBP16.9■□□□□ 0.3
C4orf46-203ENST00000508836 MYOM2P54296 1465 aa16.89■□□□□ 0.29
C4orf46-203ENST00000508836 FAM50AQ14320 339 aaKnown RBP16.88■□□□□ 0.29
C4orf46-203ENST00000508836 ZNF326Q5BKZ1 582 aaKnown RBP16.88■□□□□ 0.29
C4orf46-203ENST00000508836 SF3B2Q13435 895 aaKnown RBP16.87■□□□□ 0.29
C4orf46-203ENST00000508836 BRWD3Q6RI45 1802 aa16.86■□□□□ 0.29
C4orf46-203ENST00000508836 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.85■□□□□ 0.29
C4orf46-203ENST00000508836 ATXN8OSP0DMR3 200 aa16.85■□□□□ 0.29
C4orf46-203ENST00000508836 GLI3P10071 1580 aa16.85■□□□□ 0.29
C4orf46-203ENST00000508836 ZNF219Q9P2Y4 722 aaPredicted RBP16.84■□□□□ 0.29
C4orf46-203ENST00000508836 RALGAPBQ86X10 1494 aa16.84■□□□□ 0.29
C4orf46-203ENST00000508836 PSDA5PKW4 1024 aaPredicted RBP16.83■□□□□ 0.28
C4orf46-203ENST00000508836 SPHKAPQ2M3C7 1700 aa16.82■□□□□ 0.28
C4orf46-203ENST00000508836 NPHP3Q7Z494 1330 aa16.82■□□□□ 0.28
C4orf46-203ENST00000508836 NUP155O75694 1391 aa16.81■□□□□ 0.28
C4orf46-203ENST00000508836 ROBO2Q9HCK4 1378 aa16.81■□□□□ 0.28
C4orf46-203ENST00000508836 LOC105371045A0A1W2PR82 267 aa16.81■□□□□ 0.28
C4orf46-203ENST00000508836 UNC5CLQ8IV45 518 aa16.81■□□□□ 0.28
C4orf46-203ENST00000508836 XPCQ01831 940 aaPredicted RBP16.8■□□□□ 0.28
C4orf46-203ENST00000508836 NEXMIFQ5QGS0 1516 aa16.8■□□□□ 0.28
C4orf46-203ENST00000508836 PXDNQ92626 1479 aa16.8■□□□□ 0.28
C4orf46-203ENST00000508836 HRCP23327 699 aa16.79■□□□□ 0.28
C4orf46-203ENST00000508836 DSG3P32926 999 aa16.79■□□□□ 0.28
C4orf46-203ENST00000508836 ESCO1Q5FWF5 840 aa16.79■□□□□ 0.28
C4orf46-203ENST00000508836 SLIT2O94813 1529 aa16.79■□□□□ 0.28
C4orf46-203ENST00000508836 SEPT12Q8IYM1 358 aa16.78■□□□□ 0.28
C4orf46-203ENST00000508836 FOXO3O43524 673 aa16.76■□□□□ 0.27
C4orf46-203ENST00000508836 BAG6P46379 1132 aa16.75■□□□□ 0.27
C4orf46-203ENST00000508836 HFM1A2PYH4 1435 aa16.74■□□□□ 0.27
C4orf46-203ENST00000508836 KRT27Q7Z3Y8 459 aa16.74■□□□□ 0.27
C4orf46-203ENST00000508836 CDC42BPGQ6DT37 1551 aa16.73■□□□□ 0.27
C4orf46-203ENST00000508836 PRAG1Q86YV5 1406 aa16.73■□□□□ 0.27
C4orf46-203ENST00000508836 LRPPRCP42704 1394 aaKnown RBP16.73■□□□□ 0.27
C4orf46-203ENST00000508836 CLTCL1P53675 1640 aa16.73■□□□□ 0.27
C4orf46-203ENST00000508836 USP32Q8NFA0 1604 aa16.72■□□□□ 0.27
C4orf46-203ENST00000508836 ROCK1Q13464 1354 aa16.72■□□□□ 0.27
C4orf46-203ENST00000508836 KIF1BO60333 1816 aa16.72■□□□□ 0.27
C4orf46-203ENST00000508836 VPS72Q15906 364 aa16.71■□□□□ 0.27
C4orf46-203ENST00000508836 CCDC9Q9Y3X0 531 aaKnown RBP16.71■□□□□ 0.27
C4orf46-203ENST00000508836 A0A0G2JS52 829 aa16.69■□□□□ 0.26
C4orf46-203ENST00000508836 NUTM2FA1L443 756 aa16.69■□□□□ 0.26
C4orf46-203ENST00000508836 HAP1P54257 671 aaPredicted RBP16.69■□□□□ 0.26
C4orf46-203ENST00000508836 MYT1Q01538 1121 aa16.69■□□□□ 0.26
C4orf46-203ENST00000508836 R3HDM1Q15032 1099 aaKnown RBP16.69■□□□□ 0.26
C4orf46-203ENST00000508836 SPATA31A3Q5VYP0 1347 aa16.69■□□□□ 0.26
C4orf46-203ENST00000508836 VGFO15240 615 aaPredicted RBP16.68■□□□□ 0.26
C4orf46-203ENST00000508836 ONECUT3O60422 494 aaPredicted RBP16.68■□□□□ 0.26
C4orf46-203ENST00000508836 ABCB7O75027 752 aa16.68■□□□□ 0.26
C4orf46-203ENST00000508836 YY1P25490 414 aa16.68■□□□□ 0.26
C4orf46-203ENST00000508836 PLCH1Q4KWH8 1693 aa16.68■□□□□ 0.26
C4orf46-203ENST00000508836 EN1Q05925 392 aaPredicted RBP16.67■□□□□ 0.26
C4orf46-203ENST00000508836 NWD2Q9ULI1 1742 aa16.67■□□□□ 0.26
C4orf46-203ENST00000508836 NAIPQ13075 1403 aa16.66■□□□□ 0.26
C4orf46-203ENST00000508836 RGPD1P0DJD0 1748 aa16.65■□□□□ 0.26
C4orf46-203ENST00000508836 CCDC144AA2RUR9 1427 aa16.64■□□□□ 0.25
C4orf46-203ENST00000508836 PLEKHG5O94827 1062 aa16.64■□□□□ 0.25
C4orf46-203ENST00000508836 KRT28Q7Z3Y7 464 aa16.63■□□□□ 0.25
C4orf46-203ENST00000508836 CABLES1Q8TDN4 633 aa16.63■□□□□ 0.25
C4orf46-203ENST00000508836 KIF1AQ12756 1690 aa16.62■□□□□ 0.25
C4orf46-203ENST00000508836 ITGAEP38570 1179 aa16.62■□□□□ 0.25
C4orf46-203ENST00000508836 FAM98CQ17RN3 349 aaKnown RBP16.61■□□□□ 0.25
C4orf46-203ENST00000508836 TNS3Q68CZ2 1445 aa16.61■□□□□ 0.25
C4orf46-203ENST00000508836 FMN2Q9NZ56 1722 aa16.6■□□□□ 0.25
C4orf46-203ENST00000508836 ABCA3Q99758 1704 aa16.59■□□□□ 0.25
C4orf46-203ENST00000508836 PPLO60437 1756 aa16.59■□□□□ 0.25
C4orf46-203ENST00000508836 POLA2Q14181 598 aa16.59■□□□□ 0.25
C4orf46-203ENST00000508836 FAM182BQ5T319 152 aa16.59■□□□□ 0.25
C4orf46-203ENST00000508836 WAPLQ7Z5K2 1190 aa16.59■□□□□ 0.25
C4orf46-203ENST00000508836 STK26Q9P289 416 aa16.58■□□□□ 0.24
C4orf46-203ENST00000508836 RPGRIP1LQ68CZ1 1315 aa16.58■□□□□ 0.24
C4orf46-203ENST00000508836 DISP2A7MBM2 1401 aa16.58■□□□□ 0.24
C4orf46-203ENST00000508836 NRAPQ86VF7 1730 aa16.57■□□□□ 0.24
C4orf46-203ENST00000508836 TNS1Q9HBL0 1735 aaKnown RBP16.57■□□□□ 0.24
C4orf46-203ENST00000508836 EZH2Q15910 746 aaKnown RBP16.57■□□□□ 0.24
C4orf46-203ENST00000508836 LMOD2Q6P5Q4 547 aa16.57■□□□□ 0.24
C4orf46-203ENST00000508836 FAM83GA6ND36 823 aa16.56■□□□□ 0.24
C4orf46-203ENST00000508836 PSME1Q06323 249 aa16.56■□□□□ 0.24
C4orf46-203ENST00000508836 TECPR2O15040 1411 aa16.55■□□□□ 0.24
C4orf46-203ENST00000508836 PLEKHH1Q9ULM0 1364 aa16.55■□□□□ 0.24
C4orf46-203ENST00000508836 RGPD8O14715 1765 aaPredicted RBP16.55■□□□□ 0.24
C4orf46-203ENST00000508836 ADGRB2O60241 1585 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms