RNA–Protein interactions for RNA: ENST00000508804.5

LDB2-210, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 515 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-210ENST00000508804 UHRF1BP1Q6BDS2 1440 aa7.52□□□□□ -1.21
LDB2-210ENST00000508804 KIF7Q2M1P5 1343 aa7.52□□□□□ -1.21
LDB2-210ENST00000508804 NLRP13Q86W25 1043 aa7.51□□□□□ -1.21
LDB2-210ENST00000508804 CFDP1Q9UEE9 299 aaPredicted RBP7.51□□□□□ -1.21
LDB2-210ENST00000508804 KDM5BQ9UGL1 1544 aa7.51□□□□□ -1.21
LDB2-210ENST00000508804 AAMPQ13685 434 aa7.5□□□□□ -1.21
LDB2-210ENST00000508804 ZSWIM6Q9HCJ5 1215 aa7.5□□□□□ -1.21
LDB2-210ENST00000508804 CHIC2Q9UKJ5 165 aa7.5□□□□□ -1.21
LDB2-210ENST00000508804 TEX14Q8IWB6 1497 aa7.49□□□□□ -1.21
LDB2-210ENST00000508804 SHANK2Q9UPX8 1470 aa7.49□□□□□ -1.21
LDB2-210ENST00000508804 KIF14Q15058 1648 aa7.49□□□□□ -1.21
LDB2-210ENST00000508804 TDRD9Q8NDG6 1382 aaKnown RBP7.49□□□□□ -1.21
LDB2-210ENST00000508804 USP47Q96K76 1375 aa7.49□□□□□ -1.21
LDB2-210ENST00000508804 WDR62O43379 1518 aa7.49□□□□□ -1.21
LDB2-210ENST00000508804 DEKP35659 375 aaKnown RBP7.49□□□□□ -1.21
LDB2-210ENST00000508804 VARS2Q5ST30 1063 aaKnown RBP7.49□□□□□ -1.21
LDB2-210ENST00000508804 TROQ12816 1431 aaPredicted RBP7.49□□□□□ -1.21
LDB2-210ENST00000508804 IFT140Q96RY7 1462 aa7.49□□□□□ -1.21
LDB2-210ENST00000508804 URB2Q14146 1524 aaKnown RBP7.48□□□□□ -1.21
LDB2-210ENST00000508804 ADGBQ8N7X0 1667 aa7.48□□□□□ -1.21
LDB2-210ENST00000508804 PLEKHD1A6NEE1 506 aa7.48□□□□□ -1.21
LDB2-210ENST00000508804 ABCC5O15440 1437 aa7.48□□□□□ -1.21
LDB2-210ENST00000508804 PDE4DQ08499 809 aa7.48□□□□□ -1.21
LDB2-210ENST00000508804 CCDC82Q8N4S0 544 aa7.48□□□□□ -1.21
LDB2-210ENST00000508804 CARD11Q9BXL7 1154 aa7.48□□□□□ -1.21
LDB2-210ENST00000508804 RALGAPBQ86X10 1494 aa7.48□□□□□ -1.21
LDB2-210ENST00000508804 TRIM66O15016 1216 aa7.47□□□□□ -1.21
LDB2-210ENST00000508804 FLIIQ13045 1269 aa7.47□□□□□ -1.21
LDB2-210ENST00000508804 B4GALNT3Q6L9W6 998 aa7.47□□□□□ -1.21
LDB2-210ENST00000508804 GPIHBP1Q8IV16 184 aa7.47□□□□□ -1.21
LDB2-210ENST00000508804 KCTD17Q8N5Z5 321 aa7.47□□□□□ -1.21
LDB2-210ENST00000508804 PNISRQ8TF01 805 aaKnown RBP7.47□□□□□ -1.21
LDB2-210ENST00000508804 EIF3AQ14152 1382 aaKnown RBP7.46□□□□□ -1.21
LDB2-210ENST00000508804 NUDT7P0C024 238 aa7.46□□□□□ -1.22
LDB2-210ENST00000508804 PLPP6Q8IY26 295 aa7.46□□□□□ -1.22
LDB2-210ENST00000508804 GPHNQ9NQX3 736 aaPredicted RBP7.46□□□□□ -1.22
LDB2-210ENST00000508804 RCAN3Q9UKA8 241 aa7.46□□□□□ -1.22
LDB2-210ENST00000508804 ADAMTS12P58397 1594 aa7.46□□□□□ -1.22
LDB2-210ENST00000508804 LRPPRCP42704 1394 aaKnown RBP7.46□□□□□ -1.22
LDB2-210ENST00000508804 TARBP1Q13395 1621 aaKnown RBP7.45□□□□□ -1.22
LDB2-210ENST00000508804 RAPGEF6Q8TEU7 1601 aa7.45□□□□□ -1.22
LDB2-210ENST00000508804 ANKRD50Q9ULJ7 1429 aa7.45□□□□□ -1.22
LDB2-210ENST00000508804 PBRM1Q86U86 1689 aa7.45□□□□□ -1.22
LDB2-210ENST00000508804 EIF5BO60841 1220 aaKnown RBP7.45□□□□□ -1.22
LDB2-210ENST00000508804 RRP1P56182 461 aaKnown RBP7.45□□□□□ -1.22
LDB2-210ENST00000508804 DSG2Q14126 1118 aa7.45□□□□□ -1.22
LDB2-210ENST00000508804 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
LDB2-210ENST00000508804 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
LDB2-210ENST00000508804 PCDHGA4Q9Y5G9 962 aa7.45□□□□□ -1.22
LDB2-210ENST00000508804 KDM5DQ9BY66 1539 aa7.45□□□□□ -1.22
LDB2-210ENST00000508804 MBD5Q9P267 1494 aa7.44□□□□□ -1.22
LDB2-210ENST00000508804 MRC2Q9UBG0 1479 aa7.44□□□□□ -1.22
LDB2-210ENST00000508804 RBM26Q5T8P6 1007 aaKnown RBP7.44□□□□□ -1.22
LDB2-210ENST00000508804 FAM117AQ9C073 453 aa7.44□□□□□ -1.22
LDB2-210ENST00000508804 ADCY10Q96PN6 1610 aa7.44□□□□□ -1.22
LDB2-210ENST00000508804 MAGI1Q96QZ7 1491 aaPredicted RBP7.43□□□□□ -1.22
LDB2-210ENST00000508804 KIAA0556O60303 1618 aa7.43□□□□□ -1.22
LDB2-210ENST00000508804 IRX6P78412 446 aaPredicted RBP7.43□□□□□ -1.22
LDB2-210ENST00000508804 TMF1P82094 1093 aa7.43□□□□□ -1.22
LDB2-210ENST00000508804 FOXK1P85037 733 aa7.43□□□□□ -1.22
LDB2-210ENST00000508804 SPNS2Q8IVW8 549 aa7.43□□□□□ -1.22
LDB2-210ENST00000508804 LRRIQ1Q96JM4 1722 aa7.43□□□□□ -1.22
LDB2-210ENST00000508804 DHX29Q7Z478 1369 aaKnown RBP7.43□□□□□ -1.22
LDB2-210ENST00000508804 NINLQ9Y2I6 1382 aa7.43□□□□□ -1.22
LDB2-210ENST00000508804 NUP160Q12769 1436 aa7.43□□□□□ -1.22
LDB2-210ENST00000508804 CAMSAP2Q08AD1 1489 aa7.43□□□□□ -1.22
LDB2-210ENST00000508804 EIF2AK4Q9P2K8 1649 aaKnown RBP7.42□□□□□ -1.22
LDB2-210ENST00000508804 RAD21O60216 631 aa7.42□□□□□ -1.22
LDB2-210ENST00000508804 SLC34A2O95436 690 aa7.42□□□□□ -1.22
LDB2-210ENST00000508804 NBPF8Q3BBV2 869 aa7.42□□□□□ -1.22
LDB2-210ENST00000508804 CENPQQ7L2Z9 268 aaPredicted RBP7.42□□□□□ -1.22
LDB2-210ENST00000508804 NUP155O75694 1391 aa7.42□□□□□ -1.22
LDB2-210ENST00000508804 DENND4BO75064 1496 aaPredicted RBP7.42□□□□□ -1.22
LDB2-210ENST00000508804 MAGI3Q5TCQ9 1506 aa7.42□□□□□ -1.22
LDB2-210ENST00000508804 KDM5CP41229 1560 aa7.42□□□□□ -1.22
LDB2-210ENST00000508804 LHX6Q9UPM6 363 aa7.41□□□□□ -1.22
LDB2-210ENST00000508804 LAMC1P11047 1609 aa7.41□□□□□ -1.22
LDB2-210ENST00000508804 C11orf95C9JLR9 678 aaPredicted RBP7.4□□□□□ -1.22
LDB2-210ENST00000508804 TRAK2O60296 914 aa7.4□□□□□ -1.22
LDB2-210ENST00000508804 PDE4AP27815 886 aa7.4□□□□□ -1.22
LDB2-210ENST00000508804 BECN1Q14457 450 aa7.4□□□□□ -1.22
LDB2-210ENST00000508804 ZNF687Q8N1G0 1237 aa7.4□□□□□ -1.22
LDB2-210ENST00000508804 POLR3GLQ9BT43 218 aa7.4□□□□□ -1.22
LDB2-210ENST00000508804 TRAIPQ9BWF2 469 aa7.4□□□□□ -1.22
LDB2-210ENST00000508804 BACH2Q9BYV9 841 aa7.4□□□□□ -1.22
LDB2-210ENST00000508804 UPF2Q9HAU5 1272 aaKnown RBP7.4□□□□□ -1.22
LDB2-210ENST00000508804 CCDC144AA2RUR9 1427 aa7.4□□□□□ -1.22
LDB2-210ENST00000508804 PZPP20742 1482 aa7.4□□□□□ -1.22
LDB2-210ENST00000508804 NUP153P49790 1475 aaKnown RBP7.4□□□□□ -1.22
LDB2-210ENST00000508804 GPATCH8Q9UKJ3 1502 aaKnown RBP7.4□□□□□ -1.22
LDB2-210ENST00000508804 ARHGEF5Q12774 1597 aa7.4□□□□□ -1.22
LDB2-210ENST00000508804 CROCC2H7BZ55 1655 aa7.39□□□□□ -1.23
LDB2-210ENST00000508804 SCAPERQ9BY12 1400 aa7.39□□□□□ -1.23
LDB2-210ENST00000508804 PARD3Q8TEW0 1356 aa7.39□□□□□ -1.23
LDB2-210ENST00000508804 NCKAP5LQ9HCH0 1330 aa7.39□□□□□ -1.23
LDB2-210ENST00000508804 A6NJR5 290 aa7.39□□□□□ -1.23
LDB2-210ENST00000508804 MMRN1Q13201 1228 aa7.39□□□□□ -1.23
LDB2-210ENST00000508804 WDR43Q15061 677 aaKnown RBP eCLIP7.39□□□□□ -1.23
LDB2-210ENST00000508804 UPF1Q92900 1129 aaKnown RBP eCLIP7.39□□□□□ -1.23
LDB2-210ENST00000508804 CLUAP1Q96AJ1 413 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms