RNA–Protein interactions for RNA: ENST00000508717.1

TRIO-212, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 859 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-212ENST00000508717 XIRP1Q702N8 1843 aaKnown RBP18.6■□□□□ 0.57
TRIO-212ENST00000508717 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.58■□□□□ 0.57
TRIO-212ENST00000508717 EIF4G2P78344 907 aaKnown RBP eCLIP18.58■□□□□ 0.56
TRIO-212ENST00000508717 ADGRB2O60241 1585 aa18.58■□□□□ 0.56
TRIO-212ENST00000508717 CERKQ8TCT0 537 aa18.57■□□□□ 0.56
TRIO-212ENST00000508717 ST20-MTHFSA0A0A6YYL1 179 aa18.56■□□□□ 0.56
TRIO-212ENST00000508717 TESK2Q96S53 571 aa18.56■□□□□ 0.56
TRIO-212ENST00000508717 MSH6P52701 1360 aa18.55■□□□□ 0.56
TRIO-212ENST00000508717 RBM33Q96EV2 1170 aaKnown RBP18.55■□□□□ 0.56
TRIO-212ENST00000508717 CDC42BPGQ6DT37 1551 aa18.55■□□□□ 0.56
TRIO-212ENST00000508717 NALCNQ8IZF0 1738 aa18.54■□□□□ 0.56
TRIO-212ENST00000508717 CADPS2Q86UW7 1296 aa18.53■□□□□ 0.56
TRIO-212ENST00000508717 QRICH2Q9H0J4 1663 aa18.53■□□□□ 0.56
TRIO-212ENST00000508717 HSPA5P11021 654 aaKnown RBP18.52■□□□□ 0.56
TRIO-212ENST00000508717 SAFB2Q14151 953 aaKnown RBP eCLIP18.52■□□□□ 0.56
TRIO-212ENST00000508717 PUS7Q96PZ0 661 aaKnown RBP18.52■□□□□ 0.56
TRIO-212ENST00000508717 WASLO00401 505 aaPredicted RBP18.51■□□□□ 0.55
TRIO-212ENST00000508717 C14orf37Q86TY3 774 aa18.51■□□□□ 0.55
TRIO-212ENST00000508717 MINK1Q8N4C8 1332 aaPredicted RBP18.5■□□□□ 0.55
TRIO-212ENST00000508717 ATF3P18847 181 aa18.49■□□□□ 0.55
TRIO-212ENST00000508717 EVC2Q86UK5 1308 aa18.49■□□□□ 0.55
TRIO-212ENST00000508717 TULP4Q9NRJ4 1543 aa18.48■□□□□ 0.55
TRIO-212ENST00000508717 ANKARQ7Z5J8 1434 aa18.48■□□□□ 0.55
TRIO-212ENST00000508717 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
TRIO-212ENST00000508717 CDK19Q9BWU1 502 aa18.47■□□□□ 0.55
TRIO-212ENST00000508717 MST1RQ04912 1400 aa18.47■□□□□ 0.55
TRIO-212ENST00000508717 FMN2Q9NZ56 1722 aa18.46■□□□□ 0.55
TRIO-212ENST00000508717 TMF1P82094 1093 aa18.46■□□□□ 0.55
TRIO-212ENST00000508717 TOM1O60784 492 aa18.45■□□□□ 0.54
TRIO-212ENST00000508717 SLAIN2Q9P270 581 aa18.44■□□□□ 0.54
TRIO-212ENST00000508717 C1orf167Q5SNV9 1468 aa18.44■□□□□ 0.54
TRIO-212ENST00000508717 CDCA8Q53HL2 280 aa18.43■□□□□ 0.54
TRIO-212ENST00000508717 ATP7BP35670 1465 aa18.42■□□□□ 0.54
TRIO-212ENST00000508717 PRR36Q9H6K5 1346 aa18.42■□□□□ 0.54
TRIO-212ENST00000508717 ATAD2Q6PL18 1390 aa18.42■□□□□ 0.54
TRIO-212ENST00000508717 DISP3Q9P2K9 1392 aa18.42■□□□□ 0.54
TRIO-212ENST00000508717 CCDC61Q9Y6R9 512 aa18.41■□□□□ 0.54
TRIO-212ENST00000508717 USP32Q8NFA0 1604 aa18.41■□□□□ 0.54
TRIO-212ENST00000508717 NUDT16Q96DE0 195 aaKnown RBP18.4■□□□□ 0.54
TRIO-212ENST00000508717 SRPK2P78362 688 aaKnown RBP18.39■□□□□ 0.53
TRIO-212ENST00000508717 CABP2Q9NPB3 220 aa18.39■□□□□ 0.53
TRIO-212ENST00000508717 PLEKHG3A1L390 1219 aa18.38■□□□□ 0.53
TRIO-212ENST00000508717 UBAP1LF5GYI3 381 aa18.38■□□□□ 0.53
TRIO-212ENST00000508717 NINLQ9Y2I6 1382 aa18.37■□□□□ 0.53
TRIO-212ENST00000508717 C11orf95C9JLR9 678 aaPredicted RBP18.36■□□□□ 0.53
TRIO-212ENST00000508717 BRINP3Q76B58 766 aa18.36■□□□□ 0.53
TRIO-212ENST00000508717 TOPAZ1Q8N9V7 1692 aa18.36■□□□□ 0.53
TRIO-212ENST00000508717 ORAI2Q96SN7 254 aa18.35■□□□□ 0.53
TRIO-212ENST00000508717 ITSN1Q15811 1721 aa18.35■□□□□ 0.53
TRIO-212ENST00000508717 POLR3AO14802 1390 aaPredicted RBP18.34■□□□□ 0.53
TRIO-212ENST00000508717 PHF8Q9UPP1 1060 aa18.34■□□□□ 0.53
TRIO-212ENST00000508717 NUTM2FA1L443 756 aa18.33■□□□□ 0.52
TRIO-212ENST00000508717 ESCO1Q5FWF5 840 aa18.33■□□□□ 0.52
TRIO-212ENST00000508717 PPIP5K1Q6PFW1 1433 aa18.32■□□□□ 0.52
TRIO-212ENST00000508717 RGPD8O14715 1765 aaPredicted RBP18.32■□□□□ 0.52
TRIO-212ENST00000508717 KIF1AQ12756 1690 aa18.32■□□□□ 0.52
TRIO-212ENST00000508717 KIF7Q2M1P5 1343 aa18.32■□□□□ 0.52
TRIO-212ENST00000508717 CABP1Q9NZU7 370 aa18.32■□□□□ 0.52
TRIO-212ENST00000508717 CCDC7Q96M83 1385 aa18.3■□□□□ 0.52
TRIO-212ENST00000508717 WASHC2AQ641Q2 1341 aa18.3■□□□□ 0.52
TRIO-212ENST00000508717 ROBO1Q9Y6N7 1651 aa18.3■□□□□ 0.52
TRIO-212ENST00000508717 CPSF1Q10570 1443 aaKnown RBP18.3■□□□□ 0.52
TRIO-212ENST00000508717 BRD4O60885 1362 aaPredicted RBP18.3■□□□□ 0.52
TRIO-212ENST00000508717 NPHP3Q7Z494 1330 aa18.29■□□□□ 0.52
TRIO-212ENST00000508717 ZNF692Q9BU19 519 aaPredicted RBP18.29■□□□□ 0.52
TRIO-212ENST00000508717 AHDC1Q5TGY3 1603 aaPredicted RBP18.29■□□□□ 0.52
TRIO-212ENST00000508717 CD163L1Q9NR16 1453 aa18.28■□□□□ 0.52
TRIO-212ENST00000508717 FBXO41Q8TF61 875 aa18.28■□□□□ 0.52
TRIO-212ENST00000508717 SLC12A5Q9H2X9 1139 aa18.28■□□□□ 0.52
TRIO-212ENST00000508717 NHSL1Q5SYE7 1610 aa18.27■□□□□ 0.52
TRIO-212ENST00000508717 ACEP12821 1306 aa18.27■□□□□ 0.52
TRIO-212ENST00000508717 SOS2Q07890 1332 aaPredicted RBP18.27■□□□□ 0.52
TRIO-212ENST00000508717 PMFBP1Q8TBY8 1022 aa18.27■□□□□ 0.52
TRIO-212ENST00000508717 FOXO3O43524 673 aa18.26■□□□□ 0.51
TRIO-212ENST00000508717 PIP4K2BP78356 416 aa18.26■□□□□ 0.51
TRIO-212ENST00000508717 TERF2IPQ9NYB0 399 aa18.26■□□□□ 0.51
TRIO-212ENST00000508717 ANKRD36BQ8N2N9 1353 aa18.26■□□□□ 0.51
TRIO-212ENST00000508717 MYOM1P52179 1685 aa18.25■□□□□ 0.51
TRIO-212ENST00000508717 NGDNQ8NEJ9 315 aaKnown RBP18.25■□□□□ 0.51
TRIO-212ENST00000508717 SSH2Q76I76 1423 aa18.24■□□□□ 0.51
TRIO-212ENST00000508717 TMC1Q8TDI8 760 aa18.24■□□□□ 0.51
TRIO-212ENST00000508717 PXDNQ92626 1479 aa18.24■□□□□ 0.51
TRIO-212ENST00000508717 SBNO1A3KN83 1393 aa18.23■□□□□ 0.51
TRIO-212ENST00000508717 USP6P35125 1406 aa18.23■□□□□ 0.51
TRIO-212ENST00000508717 AKAP12Q02952 1782 aa18.22■□□□□ 0.51
TRIO-212ENST00000508717 A0A1W2PP64 1363 aa18.22■□□□□ 0.51
TRIO-212ENST00000508717 ZNF316A6NFI3 1004 aaPredicted RBP18.22■□□□□ 0.51
TRIO-212ENST00000508717 PSME1Q06323 249 aa18.22■□□□□ 0.51
TRIO-212ENST00000508717 KRT28Q7Z3Y7 464 aa18.22■□□□□ 0.51
TRIO-212ENST00000508717 HDGFL2Q7Z4V5 671 aaPredicted RBP18.22■□□□□ 0.51
TRIO-212ENST00000508717 EDC4Q6P2E9 1401 aaKnown RBP18.2■□□□□ 0.5
TRIO-212ENST00000508717 SCAF1Q9H7N4 1312 aaKnown RBP18.2■□□□□ 0.5
TRIO-212ENST00000508717 KTN1Q86UP2 1357 aaKnown RBP18.19■□□□□ 0.5
TRIO-212ENST00000508717 MON2Q7Z3U7 1717 aa18.19■□□□□ 0.5
TRIO-212ENST00000508717 DDX17Q92841 729 aaKnown RBP18.19■□□□□ 0.5
TRIO-212ENST00000508717 LRRC59Q96AG4 307 aaKnown RBP18.19■□□□□ 0.5
TRIO-212ENST00000508717 COL16A1Q07092 1604 aaPredicted RBP18.19■□□□□ 0.5
TRIO-212ENST00000508717 TRPM3Q9HCF6 1732 aaPredicted RBP18.18■□□□□ 0.5
TRIO-212ENST00000508717 POLR3GLQ9BT43 218 aa18.18■□□□□ 0.5
TRIO-212ENST00000508717 SPATA31A3Q5VYP0 1347 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms