RNA–Protein interactions for RNA: ENST00000508566.2

RAF1P1-201, Transcript of RAF1 pseudogene 1, humanhuman

BASIC

Gene RAF1P1, Length 1,696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P1-201ENST00000508566 ATAD2Q6PL18 1390 aa13.11□□□□□ -0.31
RAF1P1-201ENST00000508566 PTPRUQ92729 1446 aa13.1□□□□□ -0.31
RAF1P1-201ENST00000508566 ROBO2Q9HCK4 1378 aa13.1□□□□□ -0.31
RAF1P1-201ENST00000508566 NINLQ9Y2I6 1382 aa13.1□□□□□ -0.31
RAF1P1-201ENST00000508566 SRPK2P78362 688 aaKnown RBP13.1□□□□□ -0.31
RAF1P1-201ENST00000508566 MINK1Q8N4C8 1332 aaPredicted RBP13.1□□□□□ -0.31
RAF1P1-201ENST00000508566 NWD1Q149M9 1564 aa13.09□□□□□ -0.31
RAF1P1-201ENST00000508566 DIEXFQ68CQ4 756 aaKnown RBP13.09□□□□□ -0.31
RAF1P1-201ENST00000508566 WAPLQ7Z5K2 1190 aa13.09□□□□□ -0.31
RAF1P1-201ENST00000508566 DISP3Q9P2K9 1392 aa13.09□□□□□ -0.31
RAF1P1-201ENST00000508566 C14orf37Q86TY3 774 aa13.08□□□□□ -0.31
RAF1P1-201ENST00000508566 STRCQ7RTU9 1775 aa13.08□□□□□ -0.31
RAF1P1-201ENST00000508566 NCOA3Q9Y6Q9 1424 aa13.08□□□□□ -0.32
RAF1P1-201ENST00000508566 WASLO00401 505 aaPredicted RBP13.07□□□□□ -0.32
RAF1P1-201ENST00000508566 DDX10Q13206 875 aaKnown RBP13.07□□□□□ -0.32
RAF1P1-201ENST00000508566 PROSER2Q86WR7 435 aaPredicted RBP13.07□□□□□ -0.32
RAF1P1-201ENST00000508566 ADGRB2O60241 1585 aa13.06□□□□□ -0.32
RAF1P1-201ENST00000508566 PLEKHH1Q9ULM0 1364 aa13.06□□□□□ -0.32
RAF1P1-201ENST00000508566 C11orf95C9JLR9 678 aaPredicted RBP13.05□□□□□ -0.32
RAF1P1-201ENST00000508566 CDK19Q9BWU1 502 aa13.05□□□□□ -0.32
RAF1P1-201ENST00000508566 TMC1Q8TDI8 760 aa13.04□□□□□ -0.32
RAF1P1-201ENST00000508566 ADGRL3Q9HAR2 1447 aa13.04□□□□□ -0.32
RAF1P1-201ENST00000508566 TULP4Q9NRJ4 1543 aa13.03□□□□□ -0.32
RAF1P1-201ENST00000508566 CABP2Q9NPB3 220 aa13.02□□□□□ -0.32
RAF1P1-201ENST00000508566 TERF2IPQ9NYB0 399 aa13.02□□□□□ -0.32
RAF1P1-201ENST00000508566 ANP32CO43423 234 aa13.02□□□□□ -0.33
RAF1P1-201ENST00000508566 HDGFL2Q7Z4V5 671 aaPredicted RBP13.02□□□□□ -0.33
RAF1P1-201ENST00000508566 C19orf44Q9H6X5 657 aa13.02□□□□□ -0.33
RAF1P1-201ENST00000508566 CCDC61Q9Y6R9 512 aa13.02□□□□□ -0.33
RAF1P1-201ENST00000508566 ANKARQ7Z5J8 1434 aa13.02□□□□□ -0.33
RAF1P1-201ENST00000508566 MSH6P52701 1360 aa13.01□□□□□ -0.33
RAF1P1-201ENST00000508566 DCCP43146 1447 aa13.01□□□□□ -0.33
RAF1P1-201ENST00000508566 CDC42BPGQ6DT37 1551 aa13.01□□□□□ -0.33
RAF1P1-201ENST00000508566 ATF3P18847 181 aa13□□□□□ -0.33
RAF1P1-201ENST00000508566 KNSTRNQ9Y448 316 aa13□□□□□ -0.33
RAF1P1-201ENST00000508566 TMEM94Q12767 1356 aa12.99□□□□□ -0.33
RAF1P1-201ENST00000508566 CADPS2Q86UW7 1296 aa12.99□□□□□ -0.33
RAF1P1-201ENST00000508566 NUDT16Q96DE0 195 aaKnown RBP12.99□□□□□ -0.33
RAF1P1-201ENST00000508566 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
RAF1P1-201ENST00000508566 ANKRD36BQ8N2N9 1353 aa12.99□□□□□ -0.33
RAF1P1-201ENST00000508566 PANK3Q9H999 370 aa12.99□□□□□ -0.33
RAF1P1-201ENST00000508566 ZNF335Q9H4Z2 1342 aaPredicted RBP12.98□□□□□ -0.33
RAF1P1-201ENST00000508566 ZNF692Q9BU19 519 aaPredicted RBP12.98□□□□□ -0.33
RAF1P1-201ENST00000508566 ATP7BP35670 1465 aa12.98□□□□□ -0.33
RAF1P1-201ENST00000508566 KTN1Q86UP2 1357 aaKnown RBP12.97□□□□□ -0.33
RAF1P1-201ENST00000508566 ITSN1Q15811 1721 aa12.97□□□□□ -0.33
RAF1P1-201ENST00000508566 PPIP5K1Q6PFW1 1433 aa12.97□□□□□ -0.33
RAF1P1-201ENST00000508566 NALCNQ8IZF0 1738 aa12.96□□□□□ -0.33
RAF1P1-201ENST00000508566 SLC12A5Q9H2X9 1139 aa12.96□□□□□ -0.34
RAF1P1-201ENST00000508566 CABP1Q9NZU7 370 aa12.96□□□□□ -0.34
RAF1P1-201ENST00000508566 FMN2Q9NZ56 1722 aa12.95□□□□□ -0.34
RAF1P1-201ENST00000508566 LRRC7Q96NW7 1537 aa12.94□□□□□ -0.34
RAF1P1-201ENST00000508566 MYOM1P52179 1685 aa12.94□□□□□ -0.34
RAF1P1-201ENST00000508566 CGNL1Q0VF96 1302 aa12.94□□□□□ -0.34
RAF1P1-201ENST00000508566 PLEKHG3A1L390 1219 aa12.93□□□□□ -0.34
RAF1P1-201ENST00000508566 NGDNQ8NEJ9 315 aaKnown RBP12.93□□□□□ -0.34
RAF1P1-201ENST00000508566 STRCP1A6NGW2 1772 aa12.93□□□□□ -0.34
RAF1P1-201ENST00000508566 RBM33Q96EV2 1170 aaKnown RBP12.93□□□□□ -0.34
RAF1P1-201ENST00000508566 BRD4O60885 1362 aaPredicted RBP12.92□□□□□ -0.34
RAF1P1-201ENST00000508566 NSD2O96028 1365 aa12.92□□□□□ -0.34
RAF1P1-201ENST00000508566 NPC1L1Q9UHC9 1359 aa12.92□□□□□ -0.34
RAF1P1-201ENST00000508566 NUTM2FA1L443 756 aa12.92□□□□□ -0.34
RAF1P1-201ENST00000508566 RALBP1Q15311 655 aa12.92□□□□□ -0.34
RAF1P1-201ENST00000508566 A0A1W2PP64 1363 aa12.92□□□□□ -0.34
RAF1P1-201ENST00000508566 ESCO1Q5FWF5 840 aa12.91□□□□□ -0.34
RAF1P1-201ENST00000508566 EDC4Q6P2E9 1401 aaKnown RBP12.91□□□□□ -0.34
RAF1P1-201ENST00000508566 NSD3Q9BZ95 1437 aa12.91□□□□□ -0.34
RAF1P1-201ENST00000508566 PRR36Q9H6K5 1346 aa12.91□□□□□ -0.34
RAF1P1-201ENST00000508566 TOPAZ1Q8N9V7 1692 aa12.9□□□□□ -0.34
RAF1P1-201ENST00000508566 PER1O15534 1290 aaPredicted RBP12.9□□□□□ -0.34
RAF1P1-201ENST00000508566 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.34
RAF1P1-201ENST00000508566 CPSF1Q10570 1443 aaKnown RBP12.89□□□□□ -0.35
RAF1P1-201ENST00000508566 ACEP12821 1306 aa12.89□□□□□ -0.35
RAF1P1-201ENST00000508566 POLR3AO14802 1390 aaPredicted RBP12.89□□□□□ -0.35
RAF1P1-201ENST00000508566 USP32Q8NFA0 1604 aa12.89□□□□□ -0.35
RAF1P1-201ENST00000508566 KIF1AQ12756 1690 aa12.89□□□□□ -0.35
RAF1P1-201ENST00000508566 C1orf167Q5SNV9 1468 aa12.88□□□□□ -0.35
RAF1P1-201ENST00000508566 TTC21AQ8NDW8 1320 aa12.88□□□□□ -0.35
RAF1P1-201ENST00000508566 MST1RQ04912 1400 aa12.87□□□□□ -0.35
RAF1P1-201ENST00000508566 PSME1Q06323 249 aa12.87□□□□□ -0.35
RAF1P1-201ENST00000508566 PMFBP1Q8TBY8 1022 aa12.87□□□□□ -0.35
RAF1P1-201ENST00000508566 PRKRIP1Q9H875 184 aaPredicted RBP12.87□□□□□ -0.35
RAF1P1-201ENST00000508566 CD163L1Q9NR16 1453 aa12.86□□□□□ -0.35
RAF1P1-201ENST00000508566 LTBP4Q8N2S1 1624 aa12.86□□□□□ -0.35
RAF1P1-201ENST00000508566 USP6P35125 1406 aa12.86□□□□□ -0.35
RAF1P1-201ENST00000508566 IQSEC2Q5JU85 1478 aa12.86□□□□□ -0.35
RAF1P1-201ENST00000508566 CCER2I3L3R5 266 aa12.86□□□□□ -0.35
RAF1P1-201ENST00000508566 ADRA2BP18089 450 aa12.86□□□□□ -0.35
RAF1P1-201ENST00000508566 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
RAF1P1-201ENST00000508566 CC2D1BQ5T0F9 858 aaKnown RBP12.86□□□□□ -0.35
RAF1P1-201ENST00000508566 CARD14Q9BXL6 1004 aa12.86□□□□□ -0.35
RAF1P1-201ENST00000508566 SLAIN2Q9P270 581 aa12.86□□□□□ -0.35
RAF1P1-201ENST00000508566 NPHP3Q7Z494 1330 aa12.85□□□□□ -0.35
RAF1P1-201ENST00000508566 AKAP12Q02952 1782 aa12.85□□□□□ -0.35
RAF1P1-201ENST00000508566 MORC1Q86VD1 984 aa12.85□□□□□ -0.35
RAF1P1-201ENST00000508566 MYBBP1AQ9BQG0 1328 aaKnown RBP12.85□□□□□ -0.35
RAF1P1-201ENST00000508566 TOM1O60784 492 aa12.84□□□□□ -0.35
RAF1P1-201ENST00000508566 MON2Q7Z3U7 1717 aa12.84□□□□□ -0.35
RAF1P1-201ENST00000508566 XIRP1Q702N8 1843 aaKnown RBP12.84□□□□□ -0.35
RAF1P1-201ENST00000508566 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms