RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 XRN1Q8IZH2 1706 aaKnown RBP15.33■□□□□ 0.04
BRCC3P1-201ENST00000508559 NKTRP30414 1462 aaKnown RBP15.33■□□□□ 0.04
BRCC3P1-201ENST00000508559 ADRA2BP18089 450 aa15.32■□□□□ 0.04
BRCC3P1-201ENST00000508559 SRPK2P78362 688 aaKnown RBP15.32■□□□□ 0.04
BRCC3P1-201ENST00000508559 RBM33Q96EV2 1170 aaKnown RBP15.32■□□□□ 0.04
BRCC3P1-201ENST00000508559 TESK2Q96S53 571 aa15.32■□□□□ 0.04
BRCC3P1-201ENST00000508559 NWD1Q149M9 1564 aa15.32■□□□□ 0.04
BRCC3P1-201ENST00000508559 QRICH2Q9H0J4 1663 aa15.32■□□□□ 0.04
BRCC3P1-201ENST00000508559 SBNO2Q9Y2G9 1366 aa15.3■□□□□ 0.04
BRCC3P1-201ENST00000508559 TMEM94Q12767 1356 aa15.29■□□□□ 0.04
BRCC3P1-201ENST00000508559 CDK19Q9BWU1 502 aa15.29■□□□□ 0.04
BRCC3P1-201ENST00000508559 DISP3Q9P2K9 1392 aa15.28■□□□□ 0.04
BRCC3P1-201ENST00000508559 WASLO00401 505 aaPredicted RBP15.28■□□□□ 0.04
BRCC3P1-201ENST00000508559 ATF3P18847 181 aa15.27■□□□□ 0.04
BRCC3P1-201ENST00000508559 CABP2Q9NPB3 220 aa15.27■□□□□ 0.04
BRCC3P1-201ENST00000508559 MSH6P52701 1360 aa15.26■□□□□ 0.03
BRCC3P1-201ENST00000508559 CCDC7Q96M83 1385 aa15.26■□□□□ 0.03
BRCC3P1-201ENST00000508559 KIF7Q2M1P5 1343 aa15.26■□□□□ 0.03
BRCC3P1-201ENST00000508559 TMC1Q8TDI8 760 aa15.26■□□□□ 0.03
BRCC3P1-201ENST00000508559 C19orf44Q9H6X5 657 aa15.26■□□□□ 0.03
BRCC3P1-201ENST00000508559 ADGRL3Q9HAR2 1447 aa15.26■□□□□ 0.03
BRCC3P1-201ENST00000508559 NUTM2FA1L443 756 aa15.25■□□□□ 0.03
BRCC3P1-201ENST00000508559 C11orf95C9JLR9 678 aaPredicted RBP15.25■□□□□ 0.03
BRCC3P1-201ENST00000508559 NCOA3Q9Y6Q9 1424 aa15.25■□□□□ 0.03
BRCC3P1-201ENST00000508559 WASHC2AQ641Q2 1341 aa15.24■□□□□ 0.03
BRCC3P1-201ENST00000508559 STRCP1A6NGW2 1772 aa15.24■□□□□ 0.03
BRCC3P1-201ENST00000508559 LRRC7Q96NW7 1537 aa15.23■□□□□ 0.03
BRCC3P1-201ENST00000508559 PUS7Q96PZ0 661 aaKnown RBP15.23■□□□□ 0.03
BRCC3P1-201ENST00000508559 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.23■□□□□ 0.03
BRCC3P1-201ENST00000508559 ATAD2Q6PL18 1390 aa15.23■□□□□ 0.03
BRCC3P1-201ENST00000508559 DDX10Q13206 875 aaKnown RBP15.22■□□□□ 0.03
BRCC3P1-201ENST00000508559 CADPS2Q86UW7 1296 aa15.22■□□□□ 0.03
BRCC3P1-201ENST00000508559 NUDT16Q96DE0 195 aaKnown RBP15.22■□□□□ 0.03
BRCC3P1-201ENST00000508559 TULP4Q9NRJ4 1543 aa15.22■□□□□ 0.03
BRCC3P1-201ENST00000508559 PIAS4Q8N2W9 510 aaPredicted RBP15.21■□□□□ 0.03
BRCC3P1-201ENST00000508559 ADGRB2O60241 1585 aa15.2■□□□□ 0.02
BRCC3P1-201ENST00000508559 CCDC61Q9Y6R9 512 aa15.19■□□□□ 0.02
BRCC3P1-201ENST00000508559 NALCNQ8IZF0 1738 aa15.19■□□□□ 0.02
BRCC3P1-201ENST00000508559 HDGFL2Q7Z4V5 671 aaPredicted RBP15.18■□□□□ 0.02
BRCC3P1-201ENST00000508559 TERF2IPQ9NYB0 399 aa15.18■□□□□ 0.02
BRCC3P1-201ENST00000508559 CDC42BPGQ6DT37 1551 aa15.18■□□□□ 0.02
BRCC3P1-201ENST00000508559 DCCP43146 1447 aa15.17■□□□□ 0.02
BRCC3P1-201ENST00000508559 ESCO1Q5FWF5 840 aa15.17■□□□□ 0.02
BRCC3P1-201ENST00000508559 CABP1Q9NZU7 370 aa15.17■□□□□ 0.02
BRCC3P1-201ENST00000508559 ANKARQ7Z5J8 1434 aa15.17■□□□□ 0.02
BRCC3P1-201ENST00000508559 NINLQ9Y2I6 1382 aa15.16■□□□□ 0.02
BRCC3P1-201ENST00000508559 NGDNQ8NEJ9 315 aaKnown RBP15.16■□□□□ 0.02
BRCC3P1-201ENST00000508559 SLC12A5Q9H2X9 1139 aa15.16■□□□□ 0.02
BRCC3P1-201ENST00000508559 LTBP4Q8N2S1 1624 aa15.16■□□□□ 0.02
BRCC3P1-201ENST00000508559 PPIP5K1Q6PFW1 1433 aa15.16■□□□□ 0.02
BRCC3P1-201ENST00000508559 PRR36Q9H6K5 1346 aa15.15■□□□□ 0.02
BRCC3P1-201ENST00000508559 PMFBP1Q8TBY8 1022 aa15.14■□□□□ 0.01
BRCC3P1-201ENST00000508559 PANK3Q9H999 370 aa15.14■□□□□ 0.01
BRCC3P1-201ENST00000508559 FMN2Q9NZ56 1722 aa15.14■□□□□ 0.01
BRCC3P1-201ENST00000508559 SLAIN2Q9P270 581 aa15.13■□□□□ 0.01
BRCC3P1-201ENST00000508559 PHF8Q9UPP1 1060 aa15.13■□□□□ 0.01
BRCC3P1-201ENST00000508559 KNSTRNQ9Y448 316 aa15.13■□□□□ 0.01
BRCC3P1-201ENST00000508559 ATP7BP35670 1465 aa15.13■□□□□ 0.01
BRCC3P1-201ENST00000508559 CERKQ8TCT0 537 aa15.12■□□□□ 0.01
BRCC3P1-201ENST00000508559 PLEKHG3A1L390 1219 aa15.11■□□□□ 0.01
BRCC3P1-201ENST00000508559 TOM1O60784 492 aa15.11■□□□□ 0.01
BRCC3P1-201ENST00000508559 DIEXFQ68CQ4 756 aaKnown RBP15.11■□□□□ 0.01
BRCC3P1-201ENST00000508559 ZNF692Q9BU19 519 aaPredicted RBP15.11■□□□□ 0.01
BRCC3P1-201ENST00000508559 C1orf167Q5SNV9 1468 aa15.11■□□□□ 0.01
BRCC3P1-201ENST00000508559 ACEP12821 1306 aa15.11■□□□□ 0.01
BRCC3P1-201ENST00000508559 SCAF1Q9H7N4 1312 aaKnown RBP15.11■□□□□ 0.01
BRCC3P1-201ENST00000508559 XIRP1Q702N8 1843 aaKnown RBP15.1■□□□□ 0.01
BRCC3P1-201ENST00000508559 UBAP1LF5GYI3 381 aa15.1■□□□□ 0.01
BRCC3P1-201ENST00000508559 PSME1Q06323 249 aa15.1■□□□□ 0.01
BRCC3P1-201ENST00000508559 CNGB1Q14028 1251 aaPredicted RBP15.1■□□□□ 0.01
BRCC3P1-201ENST00000508559 ORAI2Q96SN7 254 aa15.1■□□□□ 0.01
BRCC3P1-201ENST00000508559 KTN1Q86UP2 1357 aaKnown RBP15.1■□□□□ 0.01
BRCC3P1-201ENST00000508559 ANKRD36BQ8N2N9 1353 aa15.1■□□□□ 0.01
BRCC3P1-201ENST00000508559 MST1RQ04912 1400 aa15.09■□□□□ 0.01
BRCC3P1-201ENST00000508559 ITSN1Q15811 1721 aa15.09■□□□□ 0.01
BRCC3P1-201ENST00000508559 MSH5O43196 834 aa15.08■□□□□ 0
BRCC3P1-201ENST00000508559 PAK3O75914 559 aaPredicted RBP15.07■□□□□ 0
BRCC3P1-201ENST00000508559 PIP4K2BP78356 416 aa15.07■□□□□ 0
BRCC3P1-201ENST00000508559 A0A1W2PP64 1363 aa15.07■□□□□ 0
BRCC3P1-201ENST00000508559 USP32Q8NFA0 1604 aa15.06■□□□□ 0
BRCC3P1-201ENST00000508559 MYOM1P52179 1685 aa15.06■□□□□ 0
BRCC3P1-201ENST00000508559 FOXO3O43524 673 aa15.06■□□□□ 0
BRCC3P1-201ENST00000508559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.06■□□□□ 0
BRCC3P1-201ENST00000508559 NSD3Q9BZ95 1437 aa15.06■□□□□ 0
BRCC3P1-201ENST00000508559 BRINP3Q76B58 766 aa15.05■□□□□ -0
BRCC3P1-201ENST00000508559 CGNL1Q0VF96 1302 aa15.05■□□□□ -0
BRCC3P1-201ENST00000508559 IQSEC2Q5JU85 1478 aa15.05■□□□□ -0
BRCC3P1-201ENST00000508559 RGPD8O14715 1765 aaPredicted RBP15.05■□□□□ -0
BRCC3P1-201ENST00000508559 TOPAZ1Q8N9V7 1692 aa15.04■□□□□ -0
BRCC3P1-201ENST00000508559 NPHP3Q7Z494 1330 aa15.04■□□□□ -0
BRCC3P1-201ENST00000508559 ANP32CO43423 234 aa15.04■□□□□ -0
BRCC3P1-201ENST00000508559 KRT28Q7Z3Y7 464 aa15.04■□□□□ -0
BRCC3P1-201ENST00000508559 CARD14Q9BXL6 1004 aa15.04■□□□□ -0
BRCC3P1-201ENST00000508559 POLR3AO14802 1390 aaPredicted RBP15.03■□□□□ -0
BRCC3P1-201ENST00000508559 XPCQ01831 940 aaPredicted RBP15.03■□□□□ -0
BRCC3P1-201ENST00000508559 LMOD2Q6P5Q4 547 aa15.03■□□□□ -0
BRCC3P1-201ENST00000508559 KIF1AQ12756 1690 aa15.03■□□□□ -0
BRCC3P1-201ENST00000508559 CPSF1Q10570 1443 aaKnown RBP15.02■□□□□ -0
BRCC3P1-201ENST00000508559 EDC4Q6P2E9 1401 aaKnown RBP15.02■□□□□ -0
BRCC3P1-201ENST00000508559 CC2D1BQ5T0F9 858 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms