RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 ABCA9Q8IUA7 1624 aa11.74□□□□□ -0.53
CCSER1-207ENST00000508550 CDC42BPAQ5VT25 1732 aa11.74□□□□□ -0.53
CCSER1-207ENST00000508550 ARHGAP5Q13017 1502 aa11.73□□□□□ -0.53
CCSER1-207ENST00000508550 SPRYD3Q8NCJ5 442 aa11.73□□□□□ -0.53
CCSER1-207ENST00000508550 GCC2Q8IWJ2 1684 aa11.72□□□□□ -0.53
CCSER1-207ENST00000508550 ZNF777Q9ULD5 760 aaPredicted RBP11.72□□□□□ -0.53
CCSER1-207ENST00000508550 TTC37Q6PGP7 1564 aa11.71□□□□□ -0.53
CCSER1-207ENST00000508550 ANKRD50Q9ULJ7 1429 aa11.71□□□□□ -0.53
CCSER1-207ENST00000508550 PHF14O94880 888 aa11.71□□□□□ -0.53
CCSER1-207ENST00000508550 RRP7BPQ9NSQ0 103 aa11.71□□□□□ -0.53
CCSER1-207ENST00000508550 FBXW7Q969H0 707 aa11.7□□□□□ -0.54
CCSER1-207ENST00000508550 RTN4Q9NQC3 1192 aaKnown RBP11.7□□□□□ -0.54
CCSER1-207ENST00000508550 CHIC2Q9UKJ5 165 aa11.7□□□□□ -0.54
CCSER1-207ENST00000508550 SAMD9LQ8IVG5 1584 aa11.7□□□□□ -0.54
CCSER1-207ENST00000508550 HNRNPMP52272 730 aaKnown RBP eCLIP11.69□□□□□ -0.54
CCSER1-207ENST00000508550 KCTD12Q96CX2 325 aaKnown RBP11.69□□□□□ -0.54
CCSER1-207ENST00000508550 NEO1Q92859 1461 aa11.69□□□□□ -0.54
CCSER1-207ENST00000508550 MYO5CQ9NQX4 1742 aa11.69□□□□□ -0.54
CCSER1-207ENST00000508550 KIF15Q9NS87 1388 aa11.68□□□□□ -0.54
CCSER1-207ENST00000508550 GLI2P10070 1586 aa11.68□□□□□ -0.54
CCSER1-207ENST00000508550 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
CCSER1-207ENST00000508550 MPHOSPH9Q99550 1183 aa11.68□□□□□ -0.54
CCSER1-207ENST00000508550 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.68□□□□□ -0.54
CCSER1-207ENST00000508550 ABCC1P33527 1531 aa11.68□□□□□ -0.54
CCSER1-207ENST00000508550 CDC42BPBQ9Y5S2 1711 aa11.68□□□□□ -0.54
CCSER1-207ENST00000508550 FANCAO15360 1455 aa11.68□□□□□ -0.54
CCSER1-207ENST00000508550 CD109Q6YHK3 1445 aa11.68□□□□□ -0.54
CCSER1-207ENST00000508550 ERBINQ96RT1 1412 aa11.68□□□□□ -0.54
CCSER1-207ENST00000508550 KDM5DQ9BY66 1539 aa11.67□□□□□ -0.54
CCSER1-207ENST00000508550 CROCC2H7BZ55 1655 aa11.67□□□□□ -0.54
CCSER1-207ENST00000508550 PPP1R3GB7ZBB8 358 aa11.66□□□□□ -0.54
CCSER1-207ENST00000508550 DPYSL4O14531 572 aa11.66□□□□□ -0.54
CCSER1-207ENST00000508550 PLA2G2EQ9NZK7 142 aa11.66□□□□□ -0.54
CCSER1-207ENST00000508550 PLXNC1O60486 1568 aa11.66□□□□□ -0.54
CCSER1-207ENST00000508550 ADGBQ8N7X0 1667 aa11.65□□□□□ -0.54
CCSER1-207ENST00000508550 CYB5RLQ6IPT4 315 aa11.65□□□□□ -0.54
CCSER1-207ENST00000508550 EPAS1Q99814 870 aa11.65□□□□□ -0.54
CCSER1-207ENST00000508550 CFAP74Q9C0B2 1584 aa11.65□□□□□ -0.54
CCSER1-207ENST00000508550 SYCP2Q9BX26 1530 aa11.65□□□□□ -0.55
CCSER1-207ENST00000508550 DUOX2Q9NRD8 1548 aa11.65□□□□□ -0.55
CCSER1-207ENST00000508550 ARHGEF12Q9NZN5 1544 aa11.64□□□□□ -0.55
CCSER1-207ENST00000508550 RIMBP3CA6NJZ7 1639 aa11.64□□□□□ -0.55
CCSER1-207ENST00000508550 RIMBP3BA6NNM3 1639 aa11.64□□□□□ -0.55
CCSER1-207ENST00000508550 RIMBP3Q9UFD9 1639 aa11.64□□□□□ -0.55
CCSER1-207ENST00000508550 ZNF518AQ6AHZ1 1483 aa11.63□□□□□ -0.55
CCSER1-207ENST00000508550 SPAG9O60271 1321 aaKnown RBP11.63□□□□□ -0.55
CCSER1-207ENST00000508550 COL9A1P20849 921 aa11.63□□□□□ -0.55
CCSER1-207ENST00000508550 MRPL50Q8N5N7 158 aaKnown RBP11.63□□□□□ -0.55
CCSER1-207ENST00000508550 TRIM52Q96A61 297 aa11.63□□□□□ -0.55
CCSER1-207ENST00000508550 ANKRD30BQ9BXX2 1392 aa11.63□□□□□ -0.55
CCSER1-207ENST00000508550 ADGRL1O94910 1474 aa11.62□□□□□ -0.55
CCSER1-207ENST00000508550 MLH3Q9UHC1 1453 aa11.62□□□□□ -0.55
CCSER1-207ENST00000508550 SCAPERQ9BY12 1400 aa11.61□□□□□ -0.55
CCSER1-207ENST00000508550 NBPF3Q9H094 633 aa11.61□□□□□ -0.55
CCSER1-207ENST00000508550 RABGEF1Q9UJ41 708 aa11.61□□□□□ -0.55
CCSER1-207ENST00000508550 TRAPPC8Q9Y2L5 1435 aa11.6□□□□□ -0.55
CCSER1-207ENST00000508550 DHX29Q7Z478 1369 aaKnown RBP11.6□□□□□ -0.55
CCSER1-207ENST00000508550 PPP1R15AO75807 674 aaPredicted RBP11.6□□□□□ -0.55
CCSER1-207ENST00000508550 THSD4Q6ZMP0 1018 aa11.6□□□□□ -0.55
CCSER1-207ENST00000508550 DENND4BO75064 1496 aaPredicted RBP11.59□□□□□ -0.55
CCSER1-207ENST00000508550 PZPP20742 1482 aa11.59□□□□□ -0.55
CCSER1-207ENST00000508550 MAGI2Q86UL8 1455 aa11.59□□□□□ -0.55
CCSER1-207ENST00000508550 NUP155O75694 1391 aa11.59□□□□□ -0.55
CCSER1-207ENST00000508550 ONECUT3O60422 494 aaPredicted RBP11.59□□□□□ -0.55
CCSER1-207ENST00000508550 C6orf132Q5T0Z8 1188 aa11.59□□□□□ -0.55
CCSER1-207ENST00000508550 ARIH1Q9Y4X5 557 aaPredicted RBP11.59□□□□□ -0.55
CCSER1-207ENST00000508550 ATP10AO60312 1499 aa11.58□□□□□ -0.56
CCSER1-207ENST00000508550 POGZQ7Z3K3 1410 aa11.58□□□□□ -0.56
CCSER1-207ENST00000508550 TEX14Q8IWB6 1497 aa11.57□□□□□ -0.56
CCSER1-207ENST00000508550 TONSLQ96HA7 1378 aa11.57□□□□□ -0.56
CCSER1-207ENST00000508550 GOLGA8CPA6NN73 597 aa11.57□□□□□ -0.56
CCSER1-207ENST00000508550 SPDYE16A6NNV3 312 aaPredicted RBP11.57□□□□□ -0.56
CCSER1-207ENST00000508550 PDIA6Q15084 440 aa11.57□□□□□ -0.56
CCSER1-207ENST00000508550 PROX2Q3B8N5 592 aa11.57□□□□□ -0.56
CCSER1-207ENST00000508550 PAXIP1Q6ZW49 1069 aaPredicted RBP11.57□□□□□ -0.56
CCSER1-207ENST00000508550 AFAP1Q8N556 730 aa11.57□□□□□ -0.56
CCSER1-207ENST00000508550 WNT2BQ93097 391 aa11.57□□□□□ -0.56
CCSER1-207ENST00000508550 RPRD2Q5VT52 1461 aaKnown RBP11.57□□□□□ -0.56
CCSER1-207ENST00000508550 ZFYVE16Q7Z3T8 1539 aa11.56□□□□□ -0.56
CCSER1-207ENST00000508550 KDM5CP41229 1560 aa11.56□□□□□ -0.56
CCSER1-207ENST00000508550 PTPN5P54829 565 aa11.56□□□□□ -0.56
CCSER1-207ENST00000508550 E2F4Q16254 413 aa11.55□□□□□ -0.56
CCSER1-207ENST00000508550 KDM6BO15054 1643 aa11.55□□□□□ -0.56
CCSER1-207ENST00000508550 LAPTM4BQ86VI4 370 aa11.54□□□□□ -0.56
CCSER1-207ENST00000508550 CFAP44Q96MT7 982 aa11.54□□□□□ -0.56
CCSER1-207ENST00000508550 SIN3AQ96ST3 1273 aa11.54□□□□□ -0.56
CCSER1-207ENST00000508550 ATP7AQ04656 1500 aa11.54□□□□□ -0.56
CCSER1-207ENST00000508550 UNC13BO14795 1591 aa11.54□□□□□ -0.56
CCSER1-207ENST00000508550 INO80Q9ULG1 1556 aaPredicted RBP11.54□□□□□ -0.56
CCSER1-207ENST00000508550 MAP3K4Q9Y6R4 1608 aa11.53□□□□□ -0.56
CCSER1-207ENST00000508550 IFFO2Q5TF58 517 aa11.53□□□□□ -0.56
CCSER1-207ENST00000508550 DDX12PQ92771 950 aa11.53□□□□□ -0.56
CCSER1-207ENST00000508550 FAM69CQ0P6D2 419 aa11.52□□□□□ -0.57
CCSER1-207ENST00000508550 KIAA1468Q9P260 1216 aa11.52□□□□□ -0.57
CCSER1-207ENST00000508550 EIF2AK4Q9P2K8 1649 aaKnown RBP11.52□□□□□ -0.57
CCSER1-207ENST00000508550 KANK1Q14678 1352 aa11.52□□□□□ -0.57
CCSER1-207ENST00000508550 FAM135AQ9P2D6 1515 aa11.51□□□□□ -0.57
CCSER1-207ENST00000508550 NEUROD1Q13562 356 aa11.51□□□□□ -0.57
CCSER1-207ENST00000508550 DIP2BQ9P265 1576 aa11.5□□□□□ -0.57
CCSER1-207ENST00000508550 EN1Q05925 392 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms