RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 USP46P62068 366 aa9.96□□□□□ -0.82
PDLIM5-211ENST00000508531 GUCA2AQ02747 115 aa9.96□□□□□ -0.82
PDLIM5-211ENST00000508531 RPIAP49247 311 aa9.94□□□□□ -0.82
PDLIM5-211ENST00000508531 FOXC1Q12948 553 aa9.94□□□□□ -0.82
PDLIM5-211ENST00000508531 PKDCCQ504Y2 493 aa9.93□□□□□ -0.82
PDLIM5-211ENST00000508531 NUTM1Q86Y26 1132 aa9.93□□□□□ -0.82
PDLIM5-211ENST00000508531 USB1Q9BQ65 265 aaKnown RBP9.93□□□□□ -0.82
PDLIM5-211ENST00000508531 TTLL12Q14166 644 aaPredicted RBP9.92□□□□□ -0.82
PDLIM5-211ENST00000508531 PKD2L1Q9P0L9 805 aa9.92□□□□□ -0.82
PDLIM5-211ENST00000508531 FAM187AA6NFU0 413 aa9.91□□□□□ -0.82
PDLIM5-211ENST00000508531 SSTR3P32745 418 aaPredicted RBP9.91□□□□□ -0.82
PDLIM5-211ENST00000508531 MMP16P51512 607 aa9.91□□□□□ -0.82
PDLIM5-211ENST00000508531 ZBTB24O43167 697 aaPredicted RBP9.9□□□□□ -0.82
PDLIM5-211ENST00000508531 DGAT1O75907 488 aa9.9□□□□□ -0.82
PDLIM5-211ENST00000508531 CD2BP2O95400 341 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-211ENST00000508531 SYMPKQ92797 1274 aaKnown RBP9.9□□□□□ -0.82
PDLIM5-211ENST00000508531 DXOO77932 396 aaKnown RBP9.89□□□□□ -0.83
PDLIM5-211ENST00000508531 AMHR2Q16671 573 aa9.89□□□□□ -0.83
PDLIM5-211ENST00000508531 MYT1Q01538 1121 aa9.88□□□□□ -0.83
PDLIM5-211ENST00000508531 GIGYF2Q6Y7W6 1299 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-211ENST00000508531 FDX1P10109 184 aa9.86□□□□□ -0.83
PDLIM5-211ENST00000508531 CCDC24Q8N4L8 307 aa9.86□□□□□ -0.83
PDLIM5-211ENST00000508531 SPIRE2Q8WWL2 714 aa9.86□□□□□ -0.83
PDLIM5-211ENST00000508531 ZNF787Q6DD87 383 aa9.85□□□□□ -0.83
PDLIM5-211ENST00000508531 PCDHGC3Q9UN70 934 aa9.85□□□□□ -0.83
PDLIM5-211ENST00000508531 JUNDP17535 347 aa9.84□□□□□ -0.83
PDLIM5-211ENST00000508531 NDUFV2P19404 249 aa9.84□□□□□ -0.83
PDLIM5-211ENST00000508531 TRIM32Q13049 653 aa9.84□□□□□ -0.83
PDLIM5-211ENST00000508531 C6orf229H3BNL8 230 aa9.83□□□□□ -0.84
PDLIM5-211ENST00000508531 TRIM66O15016 1216 aa9.83□□□□□ -0.84
PDLIM5-211ENST00000508531 RETREG3Q86VR2 466 aa9.83□□□□□ -0.84
PDLIM5-211ENST00000508531 CYP4X1Q8N118 509 aa9.83□□□□□ -0.84
PDLIM5-211ENST00000508531 MOXD2PA6NHM9 499 aa9.82□□□□□ -0.84
PDLIM5-211ENST00000508531 PARP9Q8IXQ6 854 aa9.82□□□□□ -0.84
PDLIM5-211ENST00000508531 BEGAINQ9BUH8 593 aa9.82□□□□□ -0.84
PDLIM5-211ENST00000508531 TOR4AQ9NXH8 423 aa9.82□□□□□ -0.84
PDLIM5-211ENST00000508531 AK7Q96M32 723 aa9.81□□□□□ -0.84
PDLIM5-211ENST00000508531 ST8SIA5O15466 376 aa9.8□□□□□ -0.84
PDLIM5-211ENST00000508531 WNT7AO00755 349 aa9.79□□□□□ -0.84
PDLIM5-211ENST00000508531 MS4A1P11836 297 aa9.79□□□□□ -0.84
PDLIM5-211ENST00000508531 TTC24A2A3L6 582 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-211ENST00000508531 NUDT12Q9BQG2 462 aa9.78□□□□□ -0.84
PDLIM5-211ENST00000508531 AAASQ9NRG9 546 aa9.78□□□□□ -0.84
PDLIM5-211ENST00000508531 MRGPRX2Q96LB1 330 aa9.77□□□□□ -0.85
PDLIM5-211ENST00000508531 TBC1D2Q9BYX2 928 aa9.77□□□□□ -0.85
PDLIM5-211ENST00000508531 POTECB2RU33 542 aa9.75□□□□□ -0.85
PDLIM5-211ENST00000508531 SKOR1P84550 965 aa9.75□□□□□ -0.85
PDLIM5-211ENST00000508531 MTMR2Q13614 643 aa9.75□□□□□ -0.85
PDLIM5-211ENST00000508531 PTCRAQ6ISU1 281 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-211ENST00000508531 SNIP1Q8TAD8 396 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-211ENST00000508531 SLC24A3Q9HC58 644 aa9.75□□□□□ -0.85
PDLIM5-211ENST00000508531 PDE4DQ08499 809 aa9.74□□□□□ -0.85
PDLIM5-211ENST00000508531 PRR7Q8TB68 274 aa9.74□□□□□ -0.85
PDLIM5-211ENST00000508531 AVPP01185 164 aa9.73□□□□□ -0.85
PDLIM5-211ENST00000508531 CCNYL3P0C7X3 344 aa9.73□□□□□ -0.85
PDLIM5-211ENST00000508531 RC3H1Q5TC82 1133 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-211ENST00000508531 RSBN1LQ6PCB5 846 aaPredicted RBP9.73□□□□□ -0.85
PDLIM5-211ENST00000508531 J3QL48 77 aa9.72□□□□□ -0.85
PDLIM5-211ENST00000508531 SMPD1P17405 629 aa9.72□□□□□ -0.85
PDLIM5-211ENST00000508531 WNT7BP56706 349 aa9.72□□□□□ -0.85
PDLIM5-211ENST00000508531 DIXDC1Q155Q3 683 aa9.72□□□□□ -0.85
PDLIM5-211ENST00000508531 DACH1Q9UI36 760 aa9.72□□□□□ -0.85
PDLIM5-211ENST00000508531 AXIN1O15169 862 aa9.71□□□□□ -0.86
PDLIM5-211ENST00000508531 PTPRNQ16849 979 aa9.71□□□□□ -0.86
PDLIM5-211ENST00000508531 CRIPAKQ8N1N5 446 aa9.71□□□□□ -0.86
PDLIM5-211ENST00000508531 PCDHB15Q9Y5E8 787 aa9.71□□□□□ -0.86
PDLIM5-211ENST00000508531 SPDYE5A6NIY4 337 aa9.7□□□□□ -0.86
PDLIM5-211ENST00000508531 SPTLC1O15269 473 aa9.69□□□□□ -0.86
PDLIM5-211ENST00000508531 GJA5P36382 358 aa9.69□□□□□ -0.86
PDLIM5-211ENST00000508531 CTC1Q2NKJ3 1217 aa9.69□□□□□ -0.86
PDLIM5-211ENST00000508531 RIC3Q7Z5B4 369 aa9.69□□□□□ -0.86
PDLIM5-211ENST00000508531 ZNF775Q96BV0 537 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-211ENST00000508531 CSPP1Q1MSJ5 1256 aa9.68□□□□□ -0.86
PDLIM5-211ENST00000508531 UNC93B1Q9H1C4 597 aa9.68□□□□□ -0.86
PDLIM5-211ENST00000508531 EVA1BQ9NVM1 165 aa9.68□□□□□ -0.86
PDLIM5-211ENST00000508531 SMCPP49901 116 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-211ENST00000508531 KCNH2Q12809 1159 aa9.67□□□□□ -0.86
PDLIM5-211ENST00000508531 DESI1Q6ICB0 168 aa9.67□□□□□ -0.86
PDLIM5-211ENST00000508531 CFAP99D6REC4 459 aa9.66□□□□□ -0.86
PDLIM5-211ENST00000508531 HRCP23327 699 aa9.66□□□□□ -0.86
PDLIM5-211ENST00000508531 SH3BP2P78314 561 aa9.66□□□□□ -0.86
PDLIM5-211ENST00000508531 LINC01559Q495D7 138 aa9.66□□□□□ -0.86
PDLIM5-211ENST00000508531 EHBP1Q8NDI1 1231 aa9.66□□□□□ -0.86
PDLIM5-211ENST00000508531 CABLES1Q8TDN4 633 aa9.66□□□□□ -0.86
PDLIM5-211ENST00000508531 HPS1Q92902 700 aa9.66□□□□□ -0.86
PDLIM5-211ENST00000508531 ZBTB3Q9H5J0 574 aa9.66□□□□□ -0.86
PDLIM5-211ENST00000508531 ALDH1A1P00352 501 aa9.65□□□□□ -0.86
PDLIM5-211ENST00000508531 MYSM1Q5VVJ2 828 aa9.65□□□□□ -0.86
PDLIM5-211ENST00000508531 GMPR2Q9P2T1 348 aaKnown RBP9.65□□□□□ -0.86
PDLIM5-211ENST00000508531 BAP1Q92560 729 aa9.64□□□□□ -0.87
PDLIM5-211ENST00000508531 LIMD1Q9UGP4 676 aa9.64□□□□□ -0.87
PDLIM5-211ENST00000508531 SIAH2O43255 324 aa9.63□□□□□ -0.87
PDLIM5-211ENST00000508531 CTHP32929 405 aa9.63□□□□□ -0.87
PDLIM5-211ENST00000508531 LYPD8Q6UX82 237 aa9.63□□□□□ -0.87
PDLIM5-211ENST00000508531 PRPF38BQ5VTL8 546 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-211ENST00000508531 QPCTQ16769 361 aa9.61□□□□□ -0.87
PDLIM5-211ENST00000508531 TSC1Q92574 1164 aa9.61□□□□□ -0.87
PDLIM5-211ENST00000508531 NUTM2BA6NNL0 878 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-211ENST00000508531 NUTM2EB1AL46 878 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-211ENST00000508531 C11orf95C9JLR9 678 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms