RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 PIK3C2GO75747 1445 aa26.68■■□□□ 1.86
SKP2-204ENST00000508514 LRPPRCP42704 1394 aaKnown RBP26.68■■□□□ 1.86
SKP2-204ENST00000508514 PLEKHH1Q9ULM0 1364 aa26.68■■□□□ 1.86
SKP2-204ENST00000508514 ABCC11Q96J66 1382 aa26.67■■□□□ 1.86
SKP2-204ENST00000508514 RXRBP28702 533 aa26.66■■□□□ 1.86
SKP2-204ENST00000508514 C8orf37Q96NL8 207 aa26.65■■□□□ 1.86
SKP2-204ENST00000508514 CDC42BPGQ6DT37 1551 aa26.64■■□□□ 1.86
SKP2-204ENST00000508514 RAB3GAP2Q9H2M9 1393 aa26.63■■□□□ 1.85
SKP2-204ENST00000508514 ADAMTS2O95450 1211 aa26.62■■□□□ 1.85
SKP2-204ENST00000508514 ESCO1Q5FWF5 840 aa26.62■■□□□ 1.85
SKP2-204ENST00000508514 C14orf93Q9H972 538 aaKnown RBP26.62■■□□□ 1.85
SKP2-204ENST00000508514 YTHDC2Q9H6S0 1430 aaKnown RBP26.6■■□□□ 1.85
SKP2-204ENST00000508514 NUTM2FA1L443 756 aa26.6■■□□□ 1.85
SKP2-204ENST00000508514 NRXN1Q9ULB1 1477 aa26.6■■□□□ 1.85
SKP2-204ENST00000508514 UPF1Q92900 1129 aaKnown RBP eCLIP26.59■■□□□ 1.85
SKP2-204ENST00000508514 QTRT2Q9H974 415 aaKnown RBP26.59■■□□□ 1.85
SKP2-204ENST00000508514 ACIN1Q9UKV3 1341 aaKnown RBP26.59■■□□□ 1.85
SKP2-204ENST00000508514 FOXO3O43524 673 aa26.58■■□□□ 1.85
SKP2-204ENST00000508514 CFAP70Q5T0N1 1121 aa26.58■■□□□ 1.85
SKP2-204ENST00000508514 PXDNQ92626 1479 aa26.57■■□□□ 1.84
SKP2-204ENST00000508514 CDK12Q9NYV4 1490 aaPredicted RBP26.57■■□□□ 1.84
SKP2-204ENST00000508514 XPCQ01831 940 aaPredicted RBP26.57■■□□□ 1.84
SKP2-204ENST00000508514 KNDC1Q76NI1 1749 aa26.56■■□□□ 1.84
SKP2-204ENST00000508514 SIRT1Q96EB6 747 aa26.56■■□□□ 1.84
SKP2-204ENST00000508514 NGLY1Q96IV0 654 aa26.56■■□□□ 1.84
SKP2-204ENST00000508514 NPHP3Q7Z494 1330 aa26.55■■□□□ 1.84
SKP2-204ENST00000508514 MYOM2P54296 1465 aa26.54■■□□□ 1.84
SKP2-204ENST00000508514 COL22A1Q8NFW1 1626 aaPredicted RBP26.53■■□□□ 1.84
SKP2-204ENST00000508514 RBM6P78332 1123 aaKnown RBP26.52■■□□□ 1.84
SKP2-204ENST00000508514 RGS12O14924 1447 aa26.51■■□□□ 1.83
SKP2-204ENST00000508514 FNBP4Q8N3X1 1017 aaPredicted RBP26.51■■□□□ 1.83
SKP2-204ENST00000508514 FMN2Q9NZ56 1722 aa26.48■■□□□ 1.83
SKP2-204ENST00000508514 USP21Q9UK80 565 aa26.48■■□□□ 1.83
SKP2-204ENST00000508514 DHX57Q6P158 1386 aaKnown RBP26.47■■□□□ 1.83
SKP2-204ENST00000508514 PRAM1Q96QH2 718 aa26.46■■□□□ 1.83
SKP2-204ENST00000508514 SAFB2Q14151 953 aaKnown RBP eCLIP26.44■■□□□ 1.82
SKP2-204ENST00000508514 SPATA31A3Q5VYP0 1347 aa26.43■■□□□ 1.82
SKP2-204ENST00000508514 BCL9LQ86UU0 1499 aa26.42■■□□□ 1.82
SKP2-204ENST00000508514 ADGRB1O14514 1584 aa26.42■■□□□ 1.82
SKP2-204ENST00000508514 ATRNO75882 1429 aa26.41■■□□□ 1.82
SKP2-204ENST00000508514 KRT28Q7Z3Y7 464 aa26.41■■□□□ 1.82
SKP2-204ENST00000508514 TRPC5Q9UL62 973 aaPredicted RBP26.41■■□□□ 1.82
SKP2-204ENST00000508514 HRCP23327 699 aa26.4■■□□□ 1.82
SKP2-204ENST00000508514 RGPD8O14715 1765 aaPredicted RBP26.39■■□□□ 1.82
SKP2-204ENST00000508514 PHF8Q9UPP1 1060 aa26.39■■□□□ 1.82
SKP2-204ENST00000508514 KDM2AQ9Y2K7 1162 aa26.39■■□□□ 1.82
SKP2-204ENST00000508514 DLC1Q96QB1 1528 aa26.39■■□□□ 1.81
SKP2-204ENST00000508514 DCAF11Q8TEB1 546 aa26.38■■□□□ 1.81
SKP2-204ENST00000508514 KIF1AQ12756 1690 aa26.37■■□□□ 1.81
SKP2-204ENST00000508514 TRAK1Q9UPV9 953 aa26.36■■□□□ 1.81
SKP2-204ENST00000508514 POGKQ9P215 609 aa26.35■■□□□ 1.81
SKP2-204ENST00000508514 MARF1Q9Y4F3 1742 aaKnown RBP26.34■■□□□ 1.81
SKP2-204ENST00000508514 USP32Q8NFA0 1604 aa26.33■■□□□ 1.81
SKP2-204ENST00000508514 HIRIP3Q9BW71 556 aaPredicted RBP26.32■■□□□ 1.8
SKP2-204ENST00000508514 PMFBP1Q8TBY8 1022 aa26.31■■□□□ 1.8
SKP2-204ENST00000508514 CABLES1Q8TDN4 633 aa26.31■■□□□ 1.8
SKP2-204ENST00000508514 SLIT2O94813 1529 aa26.3■■□□□ 1.8
SKP2-204ENST00000508514 PRR36Q9H6K5 1346 aa26.3■■□□□ 1.8
SKP2-204ENST00000508514 TNS3Q68CZ2 1445 aa26.3■■□□□ 1.8
SKP2-204ENST00000508514 ADGRB2O60241 1585 aa26.29■■□□□ 1.8
SKP2-204ENST00000508514 GJD4Q96KN9 370 aaPredicted RBP26.29■■□□□ 1.8
SKP2-204ENST00000508514 SBNO1A3KN83 1393 aa26.29■■□□□ 1.8
SKP2-204ENST00000508514 PSME1Q06323 249 aa26.28■■□□□ 1.8
SKP2-204ENST00000508514 MINK1Q8N4C8 1332 aaPredicted RBP26.28■■□□□ 1.8
SKP2-204ENST00000508514 ANKARQ7Z5J8 1434 aa26.28■■□□□ 1.8
SKP2-204ENST00000508514 UNC5CLQ8IV45 518 aa26.27■■□□□ 1.8
SKP2-204ENST00000508514 STAC3Q96MF2 364 aa26.27■■□□□ 1.8
SKP2-204ENST00000508514 PLEKHG5O94827 1062 aa26.25■■□□□ 1.79
SKP2-204ENST00000508514 ATAD2Q6PL18 1390 aa26.24■■□□□ 1.79
SKP2-204ENST00000508514 WASLO00401 505 aaPredicted RBP26.23■■□□□ 1.79
SKP2-204ENST00000508514 RALGAPBQ86X10 1494 aa26.22■■□□□ 1.79
SKP2-204ENST00000508514 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.22■■□□□ 1.79
SKP2-204ENST00000508514 GLI3P10071 1580 aa26.21■■□□□ 1.79
SKP2-204ENST00000508514 LMOD2Q6P5Q4 547 aa26.21■■□□□ 1.79
SKP2-204ENST00000508514 EP400Q96L91 3159 aa26.21■■□□□ 1.79
SKP2-204ENST00000508514 FAM83GA6ND36 823 aa26.19■■□□□ 1.78
SKP2-204ENST00000508514 ARHGEF10O15013 1369 aa26.19■■□□□ 1.78
SKP2-204ENST00000508514 TULP4Q9NRJ4 1543 aa26.19■■□□□ 1.78
SKP2-204ENST00000508514 TRPM3Q9HCF6 1732 aaPredicted RBP26.18■■□□□ 1.78
SKP2-204ENST00000508514 ABCA3Q99758 1704 aa26.17■■□□□ 1.78
SKP2-204ENST00000508514 HAP1P54257 671 aaPredicted RBP26.16■■□□□ 1.78
SKP2-204ENST00000508514 VPS72Q15906 364 aa26.15■■□□□ 1.78
SKP2-204ENST00000508514 ARHGEF28Q8N1W1 1705 aaKnown RBP26.14■■□□□ 1.78
SKP2-204ENST00000508514 EIF3AQ14152 1382 aaKnown RBP26.13■■□□□ 1.77
SKP2-204ENST00000508514 NBPF1Q3BBV0 1214 aa26.13■■□□□ 1.77
SKP2-204ENST00000508514 ALS2Q96Q42 1657 aa26.12■■□□□ 1.77
SKP2-204ENST00000508514 GPRASP1Q5JY77 1395 aa26.12■■□□□ 1.77
SKP2-204ENST00000508514 ONECUT3O60422 494 aaPredicted RBP26.11■■□□□ 1.77
SKP2-204ENST00000508514 NUDT16Q96DE0 195 aaKnown RBP26.11■■□□□ 1.77
SKP2-204ENST00000508514 PLCH1Q4KWH8 1693 aa26.11■■□□□ 1.77
SKP2-204ENST00000508514 ATP7BP35670 1465 aa26.11■■□□□ 1.77
SKP2-204ENST00000508514 SEPT12Q8IYM1 358 aa26.09■■□□□ 1.77
SKP2-204ENST00000508514 NGDNQ8NEJ9 315 aaKnown RBP26.09■■□□□ 1.77
SKP2-204ENST00000508514 CDK19Q9BWU1 502 aa26.09■■□□□ 1.77
SKP2-204ENST00000508514 NWD2Q9ULI1 1742 aa26.08■■□□□ 1.77
SKP2-204ENST00000508514 CCDC125Q86Z20 511 aa26.06■■□□□ 1.76
SKP2-204ENST00000508514 BRWD3Q6RI45 1802 aa26.06■■□□□ 1.76
SKP2-204ENST00000508514 BTG4Q9NY30 223 aa26.05■■□□□ 1.76
SKP2-204ENST00000508514 SRCAPQ6ZRS2 3230 aa26.04■■□□□ 1.76
SKP2-204ENST00000508514 PAK3O75914 559 aaPredicted RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms