RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 IDI1Q13907 227 aa14.26□□□□□ -0.13
LIN54-207ENST00000508171 SAFB2Q14151 953 aaKnown RBP eCLIP14.26□□□□□ -0.13
LIN54-207ENST00000508171 WWC1Q8IX03 1113 aa14.26□□□□□ -0.13
LIN54-207ENST00000508171 RRP7AQ9Y3A4 280 aaKnown RBP14.26□□□□□ -0.13
LIN54-207ENST00000508171 VGFO15240 615 aaPredicted RBP14.25□□□□□ -0.13
LIN54-207ENST00000508171 MTHFSP49914 203 aa14.25□□□□□ -0.13
LIN54-207ENST00000508171 SHPRHQ149N8 1683 aa14.24□□□□□ -0.13
LIN54-207ENST00000508171 CENPQQ7L2Z9 268 aaPredicted RBP14.24□□□□□ -0.13
LIN54-207ENST00000508171 GLI2P10070 1586 aa14.24□□□□□ -0.13
LIN54-207ENST00000508171 CABP2Q9NPB3 220 aa14.24□□□□□ -0.13
LIN54-207ENST00000508171 PIK3C2BO00750 1634 aa14.23□□□□□ -0.13
LIN54-207ENST00000508171 STK26Q9P289 416 aa14.23□□□□□ -0.13
LIN54-207ENST00000508171 DIP2CQ9Y2E4 1556 aa14.23□□□□□ -0.13
LIN54-207ENST00000508171 NEO1Q92859 1461 aa14.22□□□□□ -0.13
LIN54-207ENST00000508171 NEXMIFQ5QGS0 1516 aa14.22□□□□□ -0.13
LIN54-207ENST00000508171 ARHGEF28Q8N1W1 1705 aaKnown RBP14.22□□□□□ -0.13
LIN54-207ENST00000508171 CGNL1Q0VF96 1302 aa14.22□□□□□ -0.13
LIN54-207ENST00000508171 EVC2Q86UK5 1308 aa14.22□□□□□ -0.13
LIN54-207ENST00000508171 TCP11L2Q8N4U5 519 aa14.22□□□□□ -0.13
LIN54-207ENST00000508171 NGEFQ8N5V2 710 aa14.21□□□□□ -0.13
LIN54-207ENST00000508171 RUNDC1Q96C34 613 aa14.21□□□□□ -0.13
LIN54-207ENST00000508171 TULP4Q9NRJ4 1543 aa14.21□□□□□ -0.13
LIN54-207ENST00000508171 YEATS2Q9ULM3 1422 aa14.21□□□□□ -0.13
LIN54-207ENST00000508171 MYO5BQ9ULV0 1848 aa14.21□□□□□ -0.14
LIN54-207ENST00000508171 RICTORQ6R327 1708 aa14.19□□□□□ -0.14
LIN54-207ENST00000508171 RGS3P49796 1198 aa14.18□□□□□ -0.14
LIN54-207ENST00000508171 PANK1Q8TE04 598 aa14.18□□□□□ -0.14
LIN54-207ENST00000508171 DEKP35659 375 aaKnown RBP14.18□□□□□ -0.14
LIN54-207ENST00000508171 ANKRD36BQ8N2N9 1353 aa14.18□□□□□ -0.14
LIN54-207ENST00000508171 IGHDP01880 384 aa14.18□□□□□ -0.14
LIN54-207ENST00000508171 USP32Q8NFA0 1604 aa14.17□□□□□ -0.14
LIN54-207ENST00000508171 ARHGAP31Q2M1Z3 1444 aa14.17□□□□□ -0.14
LIN54-207ENST00000508171 SRPK2P78362 688 aaKnown RBP14.17□□□□□ -0.14
LIN54-207ENST00000508171 FBXO31Q5XUX0 539 aaPredicted RBP14.17□□□□□ -0.14
LIN54-207ENST00000508171 FRAT1Q92837 279 aaPredicted RBP14.17□□□□□ -0.14
LIN54-207ENST00000508171 PUS7Q96PZ0 661 aaKnown RBP14.17□□□□□ -0.14
LIN54-207ENST00000508171 PHF23Q9BUL5 403 aaPredicted RBP14.17□□□□□ -0.14
LIN54-207ENST00000508171 SLC52A1Q9NWF4 448 aa14.17□□□□□ -0.14
LIN54-207ENST00000508171 COG6Q9Y2V7 657 aa14.17□□□□□ -0.14
LIN54-207ENST00000508171 CFAP53Q96M91 514 aa14.16□□□□□ -0.14
LIN54-207ENST00000508171 PDE3AQ14432 1141 aa14.16□□□□□ -0.14
LIN54-207ENST00000508171 C8orf34Q49A92 452 aa14.16□□□□□ -0.14
LIN54-207ENST00000508171 U2AF1L5P0DN76 240 aaPredicted RBP14.15□□□□□ -0.14
LIN54-207ENST00000508171 CANXP27824 592 aaKnown RBP14.15□□□□□ -0.14
LIN54-207ENST00000508171 U2AF1Q01081 240 aaKnown RBP eCLIP14.15□□□□□ -0.14
LIN54-207ENST00000508171 LAS1LQ9Y4W2 734 aaKnown RBP14.15□□□□□ -0.14
LIN54-207ENST00000508171 IQSEC2Q5JU85 1478 aa14.15□□□□□ -0.14
LIN54-207ENST00000508171 CYB5RLQ6IPT4 315 aa14.15□□□□□ -0.14
LIN54-207ENST00000508171 MINK1Q8N4C8 1332 aaPredicted RBP14.14□□□□□ -0.15
LIN54-207ENST00000508171 RARSP54136 660 aaKnown RBP14.14□□□□□ -0.15
LIN54-207ENST00000508171 FAM161AQ3B820 660 aa14.14□□□□□ -0.15
LIN54-207ENST00000508171 BCL2L13Q9BXK5 485 aa14.14□□□□□ -0.15
LIN54-207ENST00000508171 BCL11AQ9H165 835 aa14.14□□□□□ -0.15
LIN54-207ENST00000508171 GGNBP2Q9H3C7 697 aa14.14□□□□□ -0.15
LIN54-207ENST00000508171 A0A1W2PP64 1363 aa14.14□□□□□ -0.15
LIN54-207ENST00000508171 TNNQ9UQP3 1299 aa14.14□□□□□ -0.15
LIN54-207ENST00000508171 WDR63Q8IWG1 891 aa14.13□□□□□ -0.15
LIN54-207ENST00000508171 PRAM1Q96QH2 718 aa14.13□□□□□ -0.15
LIN54-207ENST00000508171 ZFYVE9O95405 1425 aa14.13□□□□□ -0.15
LIN54-207ENST00000508171 TMEM131LA2VDJ0 1609 aa14.13□□□□□ -0.15
LIN54-207ENST00000508171 PREX1Q8TCU6 1659 aa14.12□□□□□ -0.15
LIN54-207ENST00000508171 CLUAP1Q96AJ1 413 aa14.12□□□□□ -0.15
LIN54-207ENST00000508171 RLBP1P12271 317 aa14.11□□□□□ -0.15
LIN54-207ENST00000508171 SLC4A3P48751 1232 aa14.11□□□□□ -0.15
LIN54-207ENST00000508171 POGKQ9P215 609 aa14.11□□□□□ -0.15
LIN54-207ENST00000508171 CCDC27Q2M243 656 aa14.11□□□□□ -0.15
LIN54-207ENST00000508171 NSD2O96028 1365 aa14.11□□□□□ -0.15
LIN54-207ENST00000508171 PTPRMP28827 1452 aa14.11□□□□□ -0.15
LIN54-207ENST00000508171 FYB1O15117 783 aa14.1□□□□□ -0.15
LIN54-207ENST00000508171 RTL5Q5HYW3 569 aaPredicted RBP14.1□□□□□ -0.15
LIN54-207ENST00000508171 ABCC11Q96J66 1382 aa14.1□□□□□ -0.15
LIN54-207ENST00000508171 U2SURPO15042 1029 aaKnown RBP14.09□□□□□ -0.15
LIN54-207ENST00000508171 YTHDC2Q9H6S0 1430 aaKnown RBP14.09□□□□□ -0.15
LIN54-207ENST00000508171 DDRGK1Q96HY6 314 aa14.08□□□□□ -0.15
LIN54-207ENST00000508171 FAM69CQ0P6D2 419 aa14.08□□□□□ -0.16
LIN54-207ENST00000508171 TSR2Q969E8 191 aaKnown RBP14.08□□□□□ -0.16
LIN54-207ENST00000508171 PLEKHF1Q96S99 279 aa14.08□□□□□ -0.16
LIN54-207ENST00000508171 CDK19Q9BWU1 502 aa14.08□□□□□ -0.16
LIN54-207ENST00000508171 STAG3Q9UJ98 1225 aa14.08□□□□□ -0.16
LIN54-207ENST00000508171 PCDHB15Q9Y5E8 787 aa14.08□□□□□ -0.16
LIN54-207ENST00000508171 CD163L1Q9NR16 1453 aa14.07□□□□□ -0.16
LIN54-207ENST00000508171 NINLQ9Y2I6 1382 aa14.07□□□□□ -0.16
LIN54-207ENST00000508171 TERF2IPQ9NYB0 399 aa14.07□□□□□ -0.16
LIN54-207ENST00000508171 NEFMP07197 916 aa14.07□□□□□ -0.16
LIN54-207ENST00000508171 MYH16Q9H6N6 1097 aa14.07□□□□□ -0.16
LIN54-207ENST00000508171 CABP1Q9NZU7 370 aa14.06□□□□□ -0.16
LIN54-207ENST00000508171 TSPOAP1O95153 1857 aa14.06□□□□□ -0.16
LIN54-207ENST00000508171 ATAD2Q6PL18 1390 aa14.05□□□□□ -0.16
LIN54-207ENST00000508171 ALKQ9UM73 1620 aa14.05□□□□□ -0.16
LIN54-207ENST00000508171 FBLN1P23142 703 aa14.05□□□□□ -0.16
LIN54-207ENST00000508171 TMPOP42166 694 aaKnown RBP14.05□□□□□ -0.16
LIN54-207ENST00000508171 TRIM35Q9UPQ4 493 aa14.05□□□□□ -0.16
LIN54-207ENST00000508171 WAPLQ7Z5K2 1190 aa14.05□□□□□ -0.16
LIN54-207ENST00000508171 ADGRB2O60241 1585 aa14.04□□□□□ -0.16
LIN54-207ENST00000508171 COL3A1P02461 1466 aaPredicted RBP14.03□□□□□ -0.16
LIN54-207ENST00000508171 NLRP1Q9C000 1473 aa14.03□□□□□ -0.16
LIN54-207ENST00000508171 SEC24BO95487 1268 aa14.03□□□□□ -0.16
LIN54-207ENST00000508171 EXOSC9Q06265 439 aaKnown RBP14.03□□□□□ -0.16
LIN54-207ENST00000508171 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
LIN54-207ENST00000508171 MLECQ14165 292 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms