RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 KIF1BO60333 1816 aa17.2■□□□□ 0.34
SNCAIP-209ENST00000508017 MORC1Q86VD1 984 aa17.2■□□□□ 0.34
SNCAIP-209ENST00000508017 PDZRN3Q9UPQ7 1066 aa17.2■□□□□ 0.34
SNCAIP-209ENST00000508017 MYO3AQ8NEV4 1616 aa17.19■□□□□ 0.34
SNCAIP-209ENST00000508017 RUNDC1Q96C34 613 aa17.19■□□□□ 0.34
SNCAIP-209ENST00000508017 ANTXR1Q9H6X2 564 aa17.19■□□□□ 0.34
SNCAIP-209ENST00000508017 PMFBP1Q8TBY8 1022 aa17.19■□□□□ 0.34
SNCAIP-209ENST00000508017 ATP7AQ04656 1500 aa17.18■□□□□ 0.34
SNCAIP-209ENST00000508017 NEURL4Q96JN8 1562 aa17.18■□□□□ 0.34
SNCAIP-209ENST00000508017 MROH1Q8NDA8 1641 aa17.18■□□□□ 0.34
SNCAIP-209ENST00000508017 SLC12A5Q9H2X9 1139 aa17.18■□□□□ 0.34
SNCAIP-209ENST00000508017 INO80Q9ULG1 1556 aaPredicted RBP17.17■□□□□ 0.34
SNCAIP-209ENST00000508017 TBC1D32Q96NH3 1257 aa17.17■□□□□ 0.34
SNCAIP-209ENST00000508017 SLC24A1O60721 1099 aa17.17■□□□□ 0.34
SNCAIP-209ENST00000508017 PHF23Q9BUL5 403 aaPredicted RBP17.17■□□□□ 0.34
SNCAIP-209ENST00000508017 TBC1D2Q9BYX2 928 aa17.16■□□□□ 0.34
SNCAIP-209ENST00000508017 FAM43AQ8N2R8 423 aa17.15■□□□□ 0.34
SNCAIP-209ENST00000508017 TRAK1Q9UPV9 953 aa17.15■□□□□ 0.34
SNCAIP-209ENST00000508017 SBNO2Q9Y2G9 1366 aa17.15■□□□□ 0.34
SNCAIP-209ENST00000508017 NOS1P29475 1434 aa17.14■□□□□ 0.33
SNCAIP-209ENST00000508017 ZC3H13Q5T200 1668 aaKnown RBP17.14■□□□□ 0.33
SNCAIP-209ENST00000508017 MTHFSP49914 203 aa17.13■□□□□ 0.33
SNCAIP-209ENST00000508017 WDR63Q8IWG1 891 aa17.13■□□□□ 0.33
SNCAIP-209ENST00000508017 SPRYD3Q8NCJ5 442 aa17.13■□□□□ 0.33
SNCAIP-209ENST00000508017 UPF2Q9HAU5 1272 aaKnown RBP17.13■□□□□ 0.33
SNCAIP-209ENST00000508017 NRXN1Q9ULB1 1477 aa17.13■□□□□ 0.33
SNCAIP-209ENST00000508017 QRICH2Q9H0J4 1663 aa17.13■□□□□ 0.33
SNCAIP-209ENST00000508017 UHRF1BP1LA0JNW5 1464 aa17.12■□□□□ 0.33
SNCAIP-209ENST00000508017 EFCAB6Q5THR3 1501 aa17.12■□□□□ 0.33
SNCAIP-209ENST00000508017 ARAP3Q8WWN8 1544 aa17.12■□□□□ 0.33
SNCAIP-209ENST00000508017 PPRC1Q5VV67 1664 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-209ENST00000508017 ZNF518AQ6AHZ1 1483 aa17.12■□□□□ 0.33
SNCAIP-209ENST00000508017 CHGAP10645 457 aaKnown RBP17.11■□□□□ 0.33
SNCAIP-209ENST00000508017 EIF5BO60841 1220 aaKnown RBP17.11■□□□□ 0.33
SNCAIP-209ENST00000508017 RWDD1Q9H446 243 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-209ENST00000508017 AAMPQ13685 434 aa17.1■□□□□ 0.33
SNCAIP-209ENST00000508017 FANCAO15360 1455 aa17.1■□□□□ 0.33
SNCAIP-209ENST00000508017 ARXQ96QS3 562 aa17.1■□□□□ 0.33
SNCAIP-209ENST00000508017 ZMYM3Q14202 1370 aa17.1■□□□□ 0.33
SNCAIP-209ENST00000508017 CFAP65Q6ZU64 1925 aaKnown RBP17.1■□□□□ 0.33
SNCAIP-209ENST00000508017 MVPQ14764 893 aaKnown RBP17.09■□□□□ 0.33
SNCAIP-209ENST00000508017 TMEM132EQ6IEE7 984 aa17.09■□□□□ 0.33
SNCAIP-209ENST00000508017 ABCA9Q8IUA7 1624 aa17.09■□□□□ 0.33
SNCAIP-209ENST00000508017 SETBP1Q9Y6X0 1596 aa17.08■□□□□ 0.33
SNCAIP-209ENST00000508017 CCDC27Q2M243 656 aa17.08■□□□□ 0.33
SNCAIP-209ENST00000508017 ADGRB3O60242 1522 aa17.07■□□□□ 0.32
SNCAIP-209ENST00000508017 TSR2Q969E8 191 aaKnown RBP17.07■□□□□ 0.32
SNCAIP-209ENST00000508017 RRAGDQ9NQL2 400 aaPredicted RBP17.07■□□□□ 0.32
SNCAIP-209ENST00000508017 MYH16Q9H6N6 1097 aa17.07■□□□□ 0.32
SNCAIP-209ENST00000508017 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
SNCAIP-209ENST00000508017 U2AF1L5P0DN76 240 aaPredicted RBP17.06■□□□□ 0.32
SNCAIP-209ENST00000508017 U2AF1Q01081 240 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNCAIP-209ENST00000508017 CFAP53Q96M91 514 aa17.06■□□□□ 0.32
SNCAIP-209ENST00000508017 ADGRL1O94910 1474 aa17.06■□□□□ 0.32
SNCAIP-209ENST00000508017 ZKSCAN2Q63HK3 967 aa17.06■□□□□ 0.32
SNCAIP-209ENST00000508017 FTSJ3Q8IY81 847 aaKnown RBP17.06■□□□□ 0.32
SNCAIP-209ENST00000508017 ADGRB1O14514 1584 aa17.05■□□□□ 0.32
SNCAIP-209ENST00000508017 PPLO60437 1756 aa17.05■□□□□ 0.32
SNCAIP-209ENST00000508017 MFAP1P55081 439 aaKnown RBP17.05■□□□□ 0.32
SNCAIP-209ENST00000508017 DZIP1LQ8IYY4 767 aaKnown RBP17.05■□□□□ 0.32
SNCAIP-209ENST00000508017 L1TD1Q5T7N2 865 aaKnown RBP17.05■□□□□ 0.32
SNCAIP-209ENST00000508017 C14orf93Q9H972 538 aaKnown RBP17.04■□□□□ 0.32
SNCAIP-209ENST00000508017 ADGRB2O60241 1585 aa17.04■□□□□ 0.32
SNCAIP-209ENST00000508017 C22orf23Q9BZE7 217 aa17.04■□□□□ 0.32
SNCAIP-209ENST00000508017 GZF1Q9H116 711 aaPredicted RBP17.04■□□□□ 0.32
SNCAIP-209ENST00000508017 MCM4P33991 863 aa17.03■□□□□ 0.32
SNCAIP-209ENST00000508017 SMC4Q9NTJ3 1288 aa17.02■□□□□ 0.32
SNCAIP-209ENST00000508017 KIDINS220Q9ULH0 1771 aa17.02■□□□□ 0.32
SNCAIP-209ENST00000508017 EXOSC9Q06265 439 aaKnown RBP17.02■□□□□ 0.32
SNCAIP-209ENST00000508017 XRCC6P12956 609 aaKnown RBP eCLIP17.01■□□□□ 0.31
SNCAIP-209ENST00000508017 TRIM27P14373 513 aa17.01■□□□□ 0.31
SNCAIP-209ENST00000508017 RSPH6AQ9H0K4 717 aa17.01■□□□□ 0.31
SNCAIP-209ENST00000508017 TULP4Q9NRJ4 1543 aa17■□□□□ 0.31
SNCAIP-209ENST00000508017 SSH1Q8WYL5 1049 aa17■□□□□ 0.31
SNCAIP-209ENST00000508017 PANK2Q9BZ23 570 aa17■□□□□ 0.31
SNCAIP-209ENST00000508017 CD109Q6YHK3 1445 aa17■□□□□ 0.31
SNCAIP-209ENST00000508017 NUTM2DQ5VT03 806 aaPredicted RBP16.99■□□□□ 0.31
SNCAIP-209ENST00000508017 ITPRIPQ8IWB1 547 aa16.99■□□□□ 0.31
SNCAIP-209ENST00000508017 LMTK2Q8IWU2 1503 aa16.99■□□□□ 0.31
SNCAIP-209ENST00000508017 FSD2A1L4K1 749 aa16.99■□□□□ 0.31
SNCAIP-209ENST00000508017 GOLGA6L3A6NEY3 463 aa16.99■□□□□ 0.31
SNCAIP-209ENST00000508017 CHMP5Q9NZZ3 219 aa16.98■□□□□ 0.31
SNCAIP-209ENST00000508017 NPATQ14207 1427 aa16.98■□□□□ 0.31
SNCAIP-209ENST00000508017 HDAC1Q13547 482 aaPredicted RBP16.98■□□□□ 0.31
SNCAIP-209ENST00000508017 CABP2Q9NPB3 220 aa16.98■□□□□ 0.31
SNCAIP-209ENST00000508017 ANKRD36BQ8N2N9 1353 aa16.98■□□□□ 0.31
SNCAIP-209ENST00000508017 GLI2P10070 1586 aa16.97■□□□□ 0.31
SNCAIP-209ENST00000508017 U2SURPO15042 1029 aaKnown RBP16.97■□□□□ 0.31
SNCAIP-209ENST00000508017 TRIM35Q9UPQ4 493 aa16.97■□□□□ 0.31
SNCAIP-209ENST00000508017 ARHGEF28Q8N1W1 1705 aaKnown RBP16.96■□□□□ 0.31
SNCAIP-209ENST00000508017 TRAK2O60296 914 aa16.96■□□□□ 0.31
SNCAIP-209ENST00000508017 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.31
SNCAIP-209ENST00000508017 PLEKHF1Q96S99 279 aa16.96■□□□□ 0.31
SNCAIP-209ENST00000508017 NOB1Q9ULX3 412 aaKnown RBP16.96■□□□□ 0.31
SNCAIP-209ENST00000508017 SAFB2Q14151 953 aaKnown RBP eCLIP16.96■□□□□ 0.3
SNCAIP-209ENST00000508017 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.3
SNCAIP-209ENST00000508017 ATF7IPQ6VMQ6 1270 aa16.96■□□□□ 0.3
SNCAIP-209ENST00000508017 TMEM57Q8N5G2 664 aa16.96■□□□□ 0.3
SNCAIP-209ENST00000508017 DDX19BQ9UMR2 479 aa16.96■□□□□ 0.3
SNCAIP-209ENST00000508017 EVC2Q86UK5 1308 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms