RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 UPF1Q92900 1129 aaKnown RBP eCLIP32.19■■■□□ 2.74
SNCB-204ENST00000508006 XRN1Q8IZH2 1706 aaKnown RBP32.18■■■□□ 2.74
SNCB-204ENST00000508006 ASXL1Q8IXJ9 1541 aa32.18■■■□□ 2.74
SNCB-204ENST00000508006 MST1RQ04912 1400 aa32.17■■■□□ 2.74
SNCB-204ENST00000508006 AFF2P51816 1311 aa32.16■■■□□ 2.74
SNCB-204ENST00000508006 KDM2AQ9Y2K7 1162 aa32.15■■■□□ 2.74
SNCB-204ENST00000508006 DDX17Q92841 729 aaKnown RBP32.13■■■□□ 2.73
SNCB-204ENST00000508006 KIAA1210Q9ULL0 1709 aa32.12■■■□□ 2.73
SNCB-204ENST00000508006 C8orf37Q96NL8 207 aa32.11■■■□□ 2.73
SNCB-204ENST00000508006 ADGRL3Q9HAR2 1447 aa32.1■■■□□ 2.73
SNCB-204ENST00000508006 PRAG1Q86YV5 1406 aa32.09■■■□□ 2.73
SNCB-204ENST00000508006 NHSL1Q5SYE7 1610 aa32.08■■■□□ 2.73
SNCB-204ENST00000508006 C14orf93Q9H972 538 aaKnown RBP32.07■■■□□ 2.72
SNCB-204ENST00000508006 QTRT2Q9H974 415 aaKnown RBP32.07■■■□□ 2.72
SNCB-204ENST00000508006 NGLY1Q96IV0 654 aa32.03■■■□□ 2.72
SNCB-204ENST00000508006 CDK12Q9NYV4 1490 aaPredicted RBP32.03■■■□□ 2.72
SNCB-204ENST00000508006 PNPLA6Q8IY17 1366 aa32.02■■■□□ 2.72
SNCB-204ENST00000508006 ADAMTS2O95450 1211 aa32.01■■■□□ 2.71
SNCB-204ENST00000508006 RBM6P78332 1123 aaKnown RBP32.01■■■□□ 2.71
SNCB-204ENST00000508006 NALCNQ8IZF0 1738 aa32■■■□□ 2.71
SNCB-204ENST00000508006 C1orf167Q5SNV9 1468 aa31.99■■■□□ 2.71
SNCB-204ENST00000508006 CFAP70Q5T0N1 1121 aa31.99■■■□□ 2.71
SNCB-204ENST00000508006 TRPM1Q7Z4N2 1603 aa31.99■■■□□ 2.71
SNCB-204ENST00000508006 ORAI2Q96SN7 254 aa31.97■■■□□ 2.71
SNCB-204ENST00000508006 ADGRB1O14514 1584 aa31.95■■■□□ 2.71
SNCB-204ENST00000508006 KNDC1Q76NI1 1749 aa31.95■■■□□ 2.7
SNCB-204ENST00000508006 ROBO2Q9HCK4 1378 aa31.93■■■□□ 2.7
SNCB-204ENST00000508006 PTCH1Q13635 1447 aa31.92■■■□□ 2.7
SNCB-204ENST00000508006 LRPPRCP42704 1394 aaKnown RBP31.91■■■□□ 2.7
SNCB-204ENST00000508006 SOS2Q07890 1332 aaPredicted RBP31.9■■■□□ 2.7
SNCB-204ENST00000508006 TECPR2O15040 1411 aa31.9■■■□□ 2.7
SNCB-204ENST00000508006 YTHDC2Q9H6S0 1430 aaKnown RBP31.9■■■□□ 2.7
SNCB-204ENST00000508006 NBPF8Q3BBV2 869 aa31.89■■■□□ 2.7
SNCB-204ENST00000508006 USP21Q9UK80 565 aa31.89■■■□□ 2.7
SNCB-204ENST00000508006 ABCC11Q96J66 1382 aa31.88■■■□□ 2.69
SNCB-204ENST00000508006 RALGAPBQ86X10 1494 aa31.87■■■□□ 2.69
SNCB-204ENST00000508006 RGS12O14924 1447 aa31.87■■■□□ 2.69
SNCB-204ENST00000508006 TMEM132EQ6IEE7 984 aa31.87■■■□□ 2.69
SNCB-204ENST00000508006 ESCO1Q5FWF5 840 aa31.85■■■□□ 2.69
SNCB-204ENST00000508006 SIRT1Q96EB6 747 aa31.84■■■□□ 2.69
SNCB-204ENST00000508006 TRPC5Q9UL62 973 aaPredicted RBP31.84■■■□□ 2.69
SNCB-204ENST00000508006 DLC1Q96QB1 1528 aa31.84■■■□□ 2.69
SNCB-204ENST00000508006 GPRASP1Q5JY77 1395 aa31.82■■■□□ 2.69
SNCB-204ENST00000508006 ROCK2O75116 1388 aaKnown RBP31.81■■■□□ 2.68
SNCB-204ENST00000508006 NBPF1Q3BBV0 1214 aa31.81■■■□□ 2.68
SNCB-204ENST00000508006 NPHP3Q7Z494 1330 aa31.79■■■□□ 2.68
SNCB-204ENST00000508006 STK26Q9P289 416 aa31.78■■■□□ 2.68
SNCB-204ENST00000508006 FNBP4Q8N3X1 1017 aaPredicted RBP31.77■■■□□ 2.68
SNCB-204ENST00000508006 ARHGEF28Q8N1W1 1705 aaKnown RBP31.77■■■□□ 2.68
SNCB-204ENST00000508006 FOXO3O43524 673 aa31.75■■■□□ 2.67
SNCB-204ENST00000508006 ATAD2Q6PL18 1390 aa31.75■■■□□ 2.67
SNCB-204ENST00000508006 NUTM2FA1L443 756 aa31.73■■■□□ 2.67
SNCB-204ENST00000508006 XPCQ01831 940 aaPredicted RBP31.73■■■□□ 2.67
SNCB-204ENST00000508006 WAPLQ7Z5K2 1190 aa31.71■■■□□ 2.67
SNCB-204ENST00000508006 TRAK1Q9UPV9 953 aa31.71■■■□□ 2.67
SNCB-204ENST00000508006 CARD11Q9BXL7 1154 aa31.69■■■□□ 2.66
SNCB-204ENST00000508006 COL22A1Q8NFW1 1626 aaPredicted RBP31.67■■■□□ 2.66
SNCB-204ENST00000508006 CDC42BPGQ6DT37 1551 aa31.67■■■□□ 2.66
SNCB-204ENST00000508006 EIF3AQ14152 1382 aaKnown RBP31.67■■■□□ 2.66
SNCB-204ENST00000508006 ATRNO75882 1429 aa31.66■■■□□ 2.66
SNCB-204ENST00000508006 PRAM1Q96QH2 718 aa31.64■■■□□ 2.66
SNCB-204ENST00000508006 POGKQ9P215 609 aa31.64■■■□□ 2.66
SNCB-204ENST00000508006 ZEB1P37275 1124 aaPredicted RBP31.63■■■□□ 2.65
SNCB-204ENST00000508006 PXDNQ92626 1479 aa31.62■■■□□ 2.65
SNCB-204ENST00000508006 PLEKHH1Q9ULM0 1364 aa31.6■■■□□ 2.65
SNCB-204ENST00000508006 GJD4Q96KN9 370 aaPredicted RBP31.6■■■□□ 2.65
SNCB-204ENST00000508006 ZRANB1Q9UGI0 708 aa31.59■■■□□ 2.65
SNCB-204ENST00000508006 QRICH2Q9H0J4 1663 aa31.59■■■□□ 2.65
SNCB-204ENST00000508006 ADGRB2O60241 1585 aa31.59■■■□□ 2.65
SNCB-204ENST00000508006 BCL9LQ86UU0 1499 aa31.58■■■□□ 2.65
SNCB-204ENST00000508006 CENPJQ9HC77 1338 aaPredicted RBP31.57■■■□□ 2.64
SNCB-204ENST00000508006 CCDC125Q86Z20 511 aa31.57■■■□□ 2.64
SNCB-204ENST00000508006 MARF1Q9Y4F3 1742 aaKnown RBP31.56■■■□□ 2.64
SNCB-204ENST00000508006 HAP1P54257 671 aaPredicted RBP31.56■■■□□ 2.64
SNCB-204ENST00000508006 KRT28Q7Z3Y7 464 aa31.55■■■□□ 2.64
SNCB-204ENST00000508006 UNC5CLQ8IV45 518 aa31.53■■■□□ 2.64
SNCB-204ENST00000508006 SPATA31A3Q5VYP0 1347 aa31.52■■■□□ 2.64
SNCB-204ENST00000508006 SBNO2Q9Y2G9 1366 aa31.52■■■□□ 2.64
SNCB-204ENST00000508006 USP47Q96K76 1375 aa31.51■■■□□ 2.63
SNCB-204ENST00000508006 SLC24A1O60721 1099 aa31.5■■■□□ 2.63
SNCB-204ENST00000508006 PSME1Q06323 249 aa31.5■■■□□ 2.63
SNCB-204ENST00000508006 PLEKHG5O94827 1062 aa31.49■■■□□ 2.63
SNCB-204ENST00000508006 SAFB2Q14151 953 aaKnown RBP eCLIP31.49■■■□□ 2.63
SNCB-204ENST00000508006 FMN2Q9NZ56 1722 aa31.48■■■□□ 2.63
SNCB-204ENST00000508006 PHF8Q9UPP1 1060 aa31.47■■■□□ 2.63
SNCB-204ENST00000508006 EP400Q96L91 3159 aa31.46■■■□□ 2.63
SNCB-204ENST00000508006 SRCAPQ6ZRS2 3230 aa31.46■■■□□ 2.63
SNCB-204ENST00000508006 LMOD2Q6P5Q4 547 aa31.46■■■□□ 2.63
SNCB-204ENST00000508006 KIF1AQ12756 1690 aa31.45■■■□□ 2.63
SNCB-204ENST00000508006 MINK1Q8N4C8 1332 aaPredicted RBP31.45■■■□□ 2.62
SNCB-204ENST00000508006 EIF4G2P78344 907 aaKnown RBP eCLIP31.43■■■□□ 2.62
SNCB-204ENST00000508006 ST20-MTHFSA0A0A6YYL1 179 aa31.42■■■□□ 2.62
SNCB-204ENST00000508006 CCDC9Q9Y3X0 531 aaKnown RBP31.42■■■□□ 2.62
SNCB-204ENST00000508006 SLIT2O94813 1529 aa31.41■■■□□ 2.62
SNCB-204ENST00000508006 WASLO00401 505 aaPredicted RBP31.41■■■□□ 2.62
SNCB-204ENST00000508006 CABLES1Q8TDN4 633 aa31.41■■■□□ 2.62
SNCB-204ENST00000508006 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.41■■■□□ 2.62
SNCB-204ENST00000508006 RGPD8O14715 1765 aaPredicted RBP31.4■■■□□ 2.62
SNCB-204ENST00000508006 SF3B2Q13435 895 aaKnown RBP31.39■■■□□ 2.62
SNCB-204ENST00000508006 HIRIP3Q9BW71 556 aaPredicted RBP31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms