RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 CNTLNQ9NXG0 1405 aa9.49□□□□□ -0.89
VEGFC-201ENST00000507638 PLEKHD1A6NEE1 506 aa9.49□□□□□ -0.89
VEGFC-201ENST00000507638 SLC24A1O60721 1099 aa9.49□□□□□ -0.89
VEGFC-201ENST00000507638 FOSBP53539 338 aa9.49□□□□□ -0.89
VEGFC-201ENST00000507638 MEX3CQ5U5Q3 659 aaKnown RBP9.49□□□□□ -0.89
VEGFC-201ENST00000507638 AFAP1Q8N556 730 aa9.49□□□□□ -0.89
VEGFC-201ENST00000507638 CEP170BQ9Y4F5 1589 aaPredicted RBP9.49□□□□□ -0.89
VEGFC-201ENST00000507638 ZNF142P52746 1687 aaPredicted RBP9.48□□□□□ -0.89
VEGFC-201ENST00000507638 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
VEGFC-201ENST00000507638 GOLGA3Q08378 1498 aa9.48□□□□□ -0.89
VEGFC-201ENST00000507638 AGLP35573 1532 aa9.47□□□□□ -0.89
VEGFC-201ENST00000507638 RNF17Q9BXT8 1623 aaKnown RBP9.47□□□□□ -0.89
VEGFC-201ENST00000507638 TYW1BQ6NUM6 668 aa9.47□□□□□ -0.89
VEGFC-201ENST00000507638 ANKLE2Q86XL3 938 aa9.47□□□□□ -0.89
VEGFC-201ENST00000507638 CDAN1Q8IWY9 1227 aa9.47□□□□□ -0.89
VEGFC-201ENST00000507638 ZNF454Q8N9F8 522 aa9.47□□□□□ -0.89
VEGFC-201ENST00000507638 STRCP1A6NGW2 1772 aa9.47□□□□□ -0.89
VEGFC-201ENST00000507638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.46□□□□□ -0.89
VEGFC-201ENST00000507638 MYO3AQ8NEV4 1616 aa9.46□□□□□ -0.89
VEGFC-201ENST00000507638 SENP3-EIF4A1A0A087X0R7 540 aa9.46□□□□□ -0.9
VEGFC-201ENST00000507638 SMYD5Q6GMV2 418 aa9.46□□□□□ -0.9
VEGFC-201ENST00000507638 ZDHHC16Q969W1 377 aa9.46□□□□□ -0.9
VEGFC-201ENST00000507638 NEURL4Q96JN8 1562 aa9.46□□□□□ -0.9
VEGFC-201ENST00000507638 POLR1AO95602 1720 aaPredicted RBP9.45□□□□□ -0.9
VEGFC-201ENST00000507638 BCL2L12Q9HB09 334 aa9.45□□□□□ -0.9
VEGFC-201ENST00000507638 CDK12Q9NYV4 1490 aaPredicted RBP9.45□□□□□ -0.9
VEGFC-201ENST00000507638 DNMT1P26358 1616 aaKnown RBP9.43□□□□□ -0.9
VEGFC-201ENST00000507638 JCADQ9P266 1359 aa9.43□□□□□ -0.9
VEGFC-201ENST00000507638 TULP1O00294 542 aaPredicted RBP9.43□□□□□ -0.9
VEGFC-201ENST00000507638 ARHGAP33O14559 1287 aa9.43□□□□□ -0.9
VEGFC-201ENST00000507638 MROH2AA6NES4 1674 aa9.42□□□□□ -0.9
VEGFC-201ENST00000507638 DIP2CQ9Y2E4 1556 aa9.42□□□□□ -0.9
VEGFC-201ENST00000507638 PTPREP23469 700 aa9.42□□□□□ -0.9
VEGFC-201ENST00000507638 EFCAB2Q5VUJ9 269 aa9.41□□□□□ -0.9
VEGFC-201ENST00000507638 PCDHGA10Q9Y5H3 936 aa9.41□□□□□ -0.9
VEGFC-201ENST00000507638 REREQ9P2R6 1566 aa9.41□□□□□ -0.9
VEGFC-201ENST00000507638 A2ML1A8K2U0 1454 aa9.4□□□□□ -0.9
VEGFC-201ENST00000507638 NPHP4O75161 1426 aaPredicted RBP9.4□□□□□ -0.9
VEGFC-201ENST00000507638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.4□□□□□ -0.9
VEGFC-201ENST00000507638 PLCH2O75038 1416 aa9.39□□□□□ -0.91
VEGFC-201ENST00000507638 LRP6O75581 1613 aa9.39□□□□□ -0.91
VEGFC-201ENST00000507638 RGS12O14924 1447 aa9.39□□□□□ -0.91
VEGFC-201ENST00000507638 ROBO1Q9Y6N7 1651 aa9.39□□□□□ -0.91
VEGFC-201ENST00000507638 XIRP1Q702N8 1843 aaKnown RBP9.38□□□□□ -0.91
VEGFC-201ENST00000507638 POTEB3A0JP26 581 aa9.38□□□□□ -0.91
VEGFC-201ENST00000507638 TK2O00142 265 aa9.38□□□□□ -0.91
VEGFC-201ENST00000507638 NBR1Q14596 966 aa9.38□□□□□ -0.91
VEGFC-201ENST00000507638 POTEBQ6S5H4 581 aa9.38□□□□□ -0.91
VEGFC-201ENST00000507638 DDX12PQ92771 950 aa9.38□□□□□ -0.91
VEGFC-201ENST00000507638 SLC4A5Q9BY07 1137 aa9.38□□□□□ -0.91
VEGFC-201ENST00000507638 QTRT2Q9H974 415 aaKnown RBP9.38□□□□□ -0.91
VEGFC-201ENST00000507638 ZNF518AQ6AHZ1 1483 aa9.38□□□□□ -0.91
VEGFC-201ENST00000507638 LRP5O75197 1615 aa9.38□□□□□ -0.91
VEGFC-201ENST00000507638 RAPGEF6Q8TEU7 1601 aa9.38□□□□□ -0.91
VEGFC-201ENST00000507638 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
VEGFC-201ENST00000507638 SPATA31A6Q5VVP1 1343 aa9.37□□□□□ -0.91
VEGFC-201ENST00000507638 CLTCQ00610 1675 aaKnown RBP9.37□□□□□ -0.91
VEGFC-201ENST00000507638 RBM6P78332 1123 aaKnown RBP9.37□□□□□ -0.91
VEGFC-201ENST00000507638 EN1Q05925 392 aaPredicted RBP9.37□□□□□ -0.91
VEGFC-201ENST00000507638 THEMISQ8N1K5 641 aaPredicted RBP9.37□□□□□ -0.91
VEGFC-201ENST00000507638 ABCA6Q8N139 1617 aa9.37□□□□□ -0.91
VEGFC-201ENST00000507638 PHLPP1O60346 1717 aa9.36□□□□□ -0.91
VEGFC-201ENST00000507638 LSM11P83369 360 aaKnown RBP eCLIP9.36□□□□□ -0.91
VEGFC-201ENST00000507638 SYNMO15061 1565 aa9.36□□□□□ -0.91
VEGFC-201ENST00000507638 CDK13Q14004 1512 aaKnown RBP9.36□□□□□ -0.91
VEGFC-201ENST00000507638 CTTNBP2Q8WZ74 1663 aa9.36□□□□□ -0.91
VEGFC-201ENST00000507638 AFF2P51816 1311 aa9.35□□□□□ -0.91
VEGFC-201ENST00000507638 MED14O60244 1454 aa9.35□□□□□ -0.91
VEGFC-201ENST00000507638 TESPA1A2RU30 521 aaPredicted RBP9.35□□□□□ -0.91
VEGFC-201ENST00000507638 GRXCR2A6NFK2 248 aa9.35□□□□□ -0.91
VEGFC-201ENST00000507638 PPP1R3GB7ZBB8 358 aa9.35□□□□□ -0.91
VEGFC-201ENST00000507638 CCDC125Q86Z20 511 aa9.35□□□□□ -0.91
VEGFC-201ENST00000507638 KDM5CP41229 1560 aa9.34□□□□□ -0.91
VEGFC-201ENST00000507638 KCNK17Q96T54 332 aa9.34□□□□□ -0.91
VEGFC-201ENST00000507638 ADAM33Q9BZ11 813 aa9.34□□□□□ -0.91
VEGFC-201ENST00000507638 MAP3K7O43318 606 aa9.33□□□□□ -0.92
VEGFC-201ENST00000507638 ONECUT3O60422 494 aaPredicted RBP9.33□□□□□ -0.92
VEGFC-201ENST00000507638 OSBPP22059 807 aa9.33□□□□□ -0.92
VEGFC-201ENST00000507638 C6orf132Q5T0Z8 1188 aa9.33□□□□□ -0.92
VEGFC-201ENST00000507638 GGT6Q6P531 493 aa9.33□□□□□ -0.92
VEGFC-201ENST00000507638 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
VEGFC-201ENST00000507638 KRTAP3-2Q9BYR7 98 aa9.33□□□□□ -0.92
VEGFC-201ENST00000507638 MLH3Q9UHC1 1453 aa9.33□□□□□ -0.92
VEGFC-201ENST00000507638 IQGAP1P46940 1657 aa9.32□□□□□ -0.92
VEGFC-201ENST00000507638 FBXO31Q5XUX0 539 aaPredicted RBP9.32□□□□□ -0.92
VEGFC-201ENST00000507638 NUP153P49790 1475 aaKnown RBP9.32□□□□□ -0.92
VEGFC-201ENST00000507638 ABCC1P33527 1531 aa9.31□□□□□ -0.92
VEGFC-201ENST00000507638 SEMA3EO15041 775 aa9.31□□□□□ -0.92
VEGFC-201ENST00000507638 HRCP23327 699 aa9.31□□□□□ -0.92
VEGFC-201ENST00000507638 C1QTNF8P60827 252 aa9.31□□□□□ -0.92
VEGFC-201ENST00000507638 RBM27Q9P2N5 1060 aaKnown RBP9.31□□□□□ -0.92
VEGFC-201ENST00000507638 DEPDC5O75140 1603 aa9.31□□□□□ -0.92
VEGFC-201ENST00000507638 NGLY1Q96IV0 654 aa9.3□□□□□ -0.92
VEGFC-201ENST00000507638 SLAIN2Q9P270 581 aa9.3□□□□□ -0.92
VEGFC-201ENST00000507638 ITSN2Q9NZM3 1697 aa9.29□□□□□ -0.92
VEGFC-201ENST00000507638 DEFB132Q7Z7B7 95 aa9.28□□□□□ -0.92
VEGFC-201ENST00000507638 STAC3Q96MF2 364 aa9.28□□□□□ -0.92
VEGFC-201ENST00000507638 TNRQ92752 1358 aa9.27□□□□□ -0.93
VEGFC-201ENST00000507638 MLLT3P42568 568 aaPredicted RBP9.27□□□□□ -0.93
VEGFC-201ENST00000507638 PSEN2P49810 448 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms