RNA–Protein interactions for RNA: ENST00000507522.1

SDHA-208, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 644 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-208ENST00000507522 CADPS2Q86UW7 1296 aa17.7■□□□□ 0.42
SDHA-208ENST00000507522 CLSPNQ9HAW4 1339 aa17.7■□□□□ 0.42
SDHA-208ENST00000507522 PLEKHH1Q9ULM0 1364 aa17.69■□□□□ 0.42
SDHA-208ENST00000507522 RGS17Q9UGC6 210 aaPredicted RBP17.69■□□□□ 0.42
SDHA-208ENST00000507522 MST1RQ04912 1400 aa17.69■□□□□ 0.42
SDHA-208ENST00000507522 SLAIN2Q9P270 581 aa17.68■□□□□ 0.42
SDHA-208ENST00000507522 ATF3P18847 181 aa17.67■□□□□ 0.42
SDHA-208ENST00000507522 WAPLQ7Z5K2 1190 aa17.67■□□□□ 0.42
SDHA-208ENST00000507522 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
SDHA-208ENST00000507522 ADGRB2O60241 1585 aa17.66■□□□□ 0.42
SDHA-208ENST00000507522 FMN2Q9NZ56 1722 aa17.66■□□□□ 0.42
SDHA-208ENST00000507522 NBPF1Q3BBV0 1214 aa17.64■□□□□ 0.41
SDHA-208ENST00000507522 AHDC1Q5TGY3 1603 aaPredicted RBP17.63■□□□□ 0.41
SDHA-208ENST00000507522 C1orf167Q5SNV9 1468 aa17.63■□□□□ 0.41
SDHA-208ENST00000507522 NHSL1Q5SYE7 1610 aa17.62■□□□□ 0.41
SDHA-208ENST00000507522 PRAM1Q96QH2 718 aa17.62■□□□□ 0.41
SDHA-208ENST00000507522 TRAK1Q9UPV9 953 aa17.62■□□□□ 0.41
SDHA-208ENST00000507522 PHLPP1O60346 1717 aa17.61■□□□□ 0.41
SDHA-208ENST00000507522 NBPF8Q3BBV2 869 aa17.61■□□□□ 0.41
SDHA-208ENST00000507522 GPRASP1Q5JY77 1395 aa17.61■□□□□ 0.41
SDHA-208ENST00000507522 RALGAPBQ86X10 1494 aa17.6■□□□□ 0.41
SDHA-208ENST00000507522 COL16A1Q07092 1604 aaPredicted RBP17.6■□□□□ 0.41
SDHA-208ENST00000507522 BRINP3Q76B58 766 aa17.59■□□□□ 0.41
SDHA-208ENST00000507522 RGPD8O14715 1765 aaPredicted RBP17.58■□□□□ 0.41
SDHA-208ENST00000507522 POGKQ9P215 609 aa17.58■□□□□ 0.4
SDHA-208ENST00000507522 USP32Q8NFA0 1604 aa17.58■□□□□ 0.4
SDHA-208ENST00000507522 POTEAQ6S8J7 498 aa17.57■□□□□ 0.4
SDHA-208ENST00000507522 TIMELESSQ9UNS1 1208 aa17.57■□□□□ 0.4
SDHA-208ENST00000507522 QRICH2Q9H0J4 1663 aa17.56■□□□□ 0.4
SDHA-208ENST00000507522 ROCK2O75116 1388 aaKnown RBP17.55■□□□□ 0.4
SDHA-208ENST00000507522 SAFB2Q14151 953 aaKnown RBP eCLIP17.55■□□□□ 0.4
SDHA-208ENST00000507522 KIF1AQ12756 1690 aa17.55■□□□□ 0.4
SDHA-208ENST00000507522 CCER1Q8TC90 406 aaPredicted RBP17.54■□□□□ 0.4
SDHA-208ENST00000507522 ANKARQ7Z5J8 1434 aa17.54■□□□□ 0.4
SDHA-208ENST00000507522 TULP4Q9NRJ4 1543 aa17.53■□□□□ 0.4
SDHA-208ENST00000507522 MINK1Q8N4C8 1332 aaPredicted RBP17.52■□□□□ 0.4
SDHA-208ENST00000507522 ORAI2Q96SN7 254 aa17.52■□□□□ 0.4
SDHA-208ENST00000507522 SHPRHQ149N8 1683 aa17.52■□□□□ 0.39
SDHA-208ENST00000507522 CENPJQ9HC77 1338 aaPredicted RBP17.5■□□□□ 0.39
SDHA-208ENST00000507522 ITSN1Q15811 1721 aa17.5■□□□□ 0.39
SDHA-208ENST00000507522 WASLO00401 505 aaPredicted RBP17.5■□□□□ 0.39
SDHA-208ENST00000507522 EIF3AQ14152 1382 aaKnown RBP17.5■□□□□ 0.39
SDHA-208ENST00000507522 TOPAZ1Q8N9V7 1692 aa17.49■□□□□ 0.39
SDHA-208ENST00000507522 HIRIP3Q9BW71 556 aaPredicted RBP17.49■□□□□ 0.39
SDHA-208ENST00000507522 NUTM2FA1L443 756 aa17.48■□□□□ 0.39
SDHA-208ENST00000507522 ATP7BP35670 1465 aa17.48■□□□□ 0.39
SDHA-208ENST00000507522 ESCO1Q5FWF5 840 aa17.47■□□□□ 0.39
SDHA-208ENST00000507522 PXDNQ92626 1479 aa17.47■□□□□ 0.39
SDHA-208ENST00000507522 SOS2Q07890 1332 aaPredicted RBP17.47■□□□□ 0.39
SDHA-208ENST00000507522 PRR36Q9H6K5 1346 aa17.47■□□□□ 0.39
SDHA-208ENST00000507522 JCADQ9P266 1359 aa17.46■□□□□ 0.39
SDHA-208ENST00000507522 CARD11Q9BXL7 1154 aa17.46■□□□□ 0.39
SDHA-208ENST00000507522 SBNO2Q9Y2G9 1366 aa17.45■□□□□ 0.38
SDHA-208ENST00000507522 DDX17Q92841 729 aaKnown RBP17.45■□□□□ 0.38
SDHA-208ENST00000507522 NPHP3Q7Z494 1330 aa17.45■□□□□ 0.38
SDHA-208ENST00000507522 LRP6O75581 1613 aa17.43■□□□□ 0.38
SDHA-208ENST00000507522 PHF8Q9UPP1 1060 aa17.43■□□□□ 0.38
SDHA-208ENST00000507522 CDK19Q9BWU1 502 aa17.42■□□□□ 0.38
SDHA-208ENST00000507522 COL22A1Q8NFW1 1626 aaPredicted RBP17.42■□□□□ 0.38
SDHA-208ENST00000507522 FOXO3O43524 673 aa17.41■□□□□ 0.38
SDHA-208ENST00000507522 LRRC59Q96AG4 307 aaKnown RBP17.41■□□□□ 0.38
SDHA-208ENST00000507522 TRPM3Q9HCF6 1732 aaPredicted RBP17.41■□□□□ 0.38
SDHA-208ENST00000507522 NUDT16Q96DE0 195 aaKnown RBP17.4■□□□□ 0.38
SDHA-208ENST00000507522 PNPLA6Q8IY17 1366 aa17.4■□□□□ 0.38
SDHA-208ENST00000507522 SPATA31A6Q5VVP1 1343 aa17.39■□□□□ 0.37
SDHA-208ENST00000507522 EVC2Q86UK5 1308 aa17.37■□□□□ 0.37
SDHA-208ENST00000507522 ALS2Q96Q42 1657 aa17.36■□□□□ 0.37
SDHA-208ENST00000507522 PMFBP1Q8TBY8 1022 aa17.36■□□□□ 0.37
SDHA-208ENST00000507522 CCDC61Q9Y6R9 512 aa17.36■□□□□ 0.37
SDHA-208ENST00000507522 POLR3AO14802 1390 aaPredicted RBP17.36■□□□□ 0.37
SDHA-208ENST00000507522 USP47Q96K76 1375 aa17.36■□□□□ 0.37
SDHA-208ENST00000507522 PLEKHG3A1L390 1219 aa17.35■□□□□ 0.37
SDHA-208ENST00000507522 XPCQ01831 940 aaPredicted RBP17.35■□□□□ 0.37
SDHA-208ENST00000507522 KRT28Q7Z3Y7 464 aa17.35■□□□□ 0.37
SDHA-208ENST00000507522 CABP2Q9NPB3 220 aa17.35■□□□□ 0.37
SDHA-208ENST00000507522 SBNO1A3KN83 1393 aa17.35■□□□□ 0.37
SDHA-208ENST00000507522 SRPK2P78362 688 aaKnown RBP17.34■□□□□ 0.37
SDHA-208ENST00000507522 SPATA31A3Q5VYP0 1347 aa17.34■□□□□ 0.37
SDHA-208ENST00000507522 TNS3Q68CZ2 1445 aa17.34■□□□□ 0.37
SDHA-208ENST00000507522 PPIP5K1Q6PFW1 1433 aa17.34■□□□□ 0.37
SDHA-208ENST00000507522 TESK2Q96S53 571 aa17.34■□□□□ 0.37
SDHA-208ENST00000507522 ST20-MTHFSA0A0A6YYL1 179 aa17.33■□□□□ 0.36
SDHA-208ENST00000507522 AKAP12Q02952 1782 aa17.33■□□□□ 0.36
SDHA-208ENST00000507522 ABCA3Q99758 1704 aa17.33■□□□□ 0.36
SDHA-208ENST00000507522 PSME1Q06323 249 aa17.32■□□□□ 0.36
SDHA-208ENST00000507522 MEX3CQ5U5Q3 659 aaKnown RBP17.32■□□□□ 0.36
SDHA-208ENST00000507522 MARF1Q9Y4F3 1742 aaKnown RBP17.32■□□□□ 0.36
SDHA-208ENST00000507522 ATAD2Q6PL18 1390 aa17.31■□□□□ 0.36
SDHA-208ENST00000507522 CRYBG1Q9Y4K1 1723 aa17.3■□□□□ 0.36
SDHA-208ENST00000507522 ACEP12821 1306 aa17.3■□□□□ 0.36
SDHA-208ENST00000507522 NGDNQ8NEJ9 315 aaKnown RBP17.3■□□□□ 0.36
SDHA-208ENST00000507522 UPF1Q92900 1129 aaKnown RBP eCLIP17.3■□□□□ 0.36
SDHA-208ENST00000507522 PUS7Q96PZ0 661 aaKnown RBP17.29■□□□□ 0.36
SDHA-208ENST00000507522 ARHGEF10O15013 1369 aa17.28■□□□□ 0.36
SDHA-208ENST00000507522 MON2Q7Z3U7 1717 aa17.28■□□□□ 0.36
SDHA-208ENST00000507522 SLC24A1O60721 1099 aa17.28■□□□□ 0.36
SDHA-208ENST00000507522 ZNF772Q68DY9 489 aaPredicted RBP17.28■□□□□ 0.36
SDHA-208ENST00000507522 CABP1Q9NZU7 370 aa17.27■□□□□ 0.36
SDHA-208ENST00000507522 NRKQ7Z2Y5 1582 aa17.27■□□□□ 0.35
SDHA-208ENST00000507522 BRD4O60885 1362 aaPredicted RBP17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms